Mutagenetix > Incidental Mutation

Incidental Mutation 'R4775:Or1e29'

367861

Institutional Source

Beutler Lab

Gene Symbol

Or1e29

Ensembl Gene

ENSMUSG00000070383

Gene Name

olfactory receptor family 1 subfamily E member 29

Synonyms

MOR135-6, GA_x6K02T2P1NL-3932085-3931147, Olfr389

MMRRC Submission

041991-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.054) question?

Stock #

R4775 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

73667213-73671415 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 73667377 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Histidine at position 259 (Y259H)

Ref Sequence

ENSEMBL: ENSMUSP00000149734 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000122224] [ENSMUST00000124927] [ENSMUST00000215418]

AlphaFold

Q7TRX7

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000118611

Predicted Effect

probably damaging
Transcript: ENSMUST00000122224
AA Change: Y259H

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000113364
Gene: ENSMUSG00000070383
AA Change: Y259H

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	308	2.8e-56	PFAM
Pfam:7TM_GPCR_Srsx	35	305	4.2e-6	PFAM
Pfam:7tm_1	41	290	2e-25	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000124927
AA Change: Y259H

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000115639
Gene: ENSMUSG00000070383
AA Change: Y259H

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	35	221	6.6e-7	PFAM
Pfam:7tm_1	41	224	3.5e-29	PFAM
Pfam:7tm_4	139	224	1.4e-20	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000215418
AA Change: Y259H

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Coding Region Coverage

1x: 99.1%
3x: 98.4%
10x: 96.6%
20x: 93.4%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acaca	A	G	11: 84,134,165 (GRCm39)	Y426C	probably damaging	Het
Adam7	A	G	14: 68,745,361 (GRCm39)	I621T	probably benign	Het
Adamts1	A	T	16: 85,597,278 (GRCm39)	Y260*	probably null	Het
Adgrf1	C	T	17: 43,622,054 (GRCm39)	L764F	probably damaging	Het
Afg3l2	G	T	18: 67,554,329 (GRCm39)	L458M	probably damaging	Het
Atp9b	A	G	18: 80,808,984 (GRCm39)		probably null	Het
C5ar2	A	C	7: 15,971,540 (GRCm39)	L129R	probably damaging	Het
Ccdc174	G	A	6: 91,867,875 (GRCm39)		probably null	Het
Cidec	T	C	6: 113,411,695 (GRCm39)	M1V	probably null	Het
Clec16a	G	T	16: 10,456,778 (GRCm39)	R663L	probably damaging	Het
Col25a1	T	C	3: 129,976,468 (GRCm39)	C118R	possibly damaging	Het
Cox6b2	A	G	7: 4,755,074 (GRCm39)	C67R	probably damaging	Het
Cspg4b	A	T	13: 113,454,229 (GRCm39)	I92F	possibly damaging	Het
Cwf19l2	A	G	9: 3,430,973 (GRCm39)	Y435C	probably benign	Het
Dapk1	T	A	13: 60,897,156 (GRCm39)	S792T	probably benign	Het
Dis3l	T	A	9: 64,238,190 (GRCm39)	N101Y	probably benign	Het
Dsg4	A	G	18: 20,604,184 (GRCm39)	T884A	possibly damaging	Het
Dvl1	T	C	4: 155,942,584 (GRCm39)	W617R	probably benign	Het
Eml5	A	G	12: 98,768,566 (GRCm39)	V1503A	probably benign	Het
Engase	A	T	11: 118,373,497 (GRCm39)	D280V	probably benign	Het
F11r	T	C	1: 171,289,209 (GRCm39)	S224P	probably damaging	Het
Fanca	A	G	8: 124,023,045 (GRCm39)	V564A	probably damaging	Het
Foxj2	G	T	6: 122,810,230 (GRCm39)	Q196H	probably benign	Het
Gle1	T	C	2: 29,826,073 (GRCm39)	W51R	possibly damaging	Het
Gm94	A	G	18: 43,925,836 (GRCm39)		probably null	Het
Gm9830	A	T	9: 44,375,721 (GRCm39)		noncoding transcript	Het
Gpaa1	T	A	15: 76,218,891 (GRCm39)		probably null	Het
Grin1	C	T	2: 25,182,475 (GRCm39)	A929T	possibly damaging	Het
Grm7	T	A	6: 110,891,332 (GRCm39)	D188E	probably damaging	Het
Gtf2ird2	T	C	5: 134,242,970 (GRCm39)	F395L	probably benign	Het
Lipo3	C	A	19: 33,757,795 (GRCm39)	G225C	probably damaging	Het
Lonrf2	T	A	1: 38,857,140 (GRCm39)		probably null	Het
Marveld2	A	G	13: 100,753,303 (GRCm39)		probably benign	Het
Mpl	A	G	4: 118,305,777 (GRCm39)	L416P	probably damaging	Het
Mppe1	A	G	18: 67,359,930 (GRCm39)	L312P	possibly damaging	Het
Mpzl3	T	A	9: 44,977,730 (GRCm39)	S113T	probably damaging	Het
Mylk3	G	A	8: 86,085,689 (GRCm39)	Q149*	probably null	Het
Myt1	T	A	2: 181,464,470 (GRCm39)	I968N	probably damaging	Het
Ndc80	A	G	17: 71,821,265 (GRCm39)	Y228H	probably damaging	Het
Nelfcd	T	G	2: 174,268,369 (GRCm39)	C520G	probably damaging	Het
Nfrkb	C	A	9: 31,330,345 (GRCm39)	T1199K	possibly damaging	Het
Nipa2	A	G	7: 55,585,611 (GRCm39)	I109T	probably benign	Het
Nlrp4e	A	G	7: 23,042,525 (GRCm39)	T804A	probably benign	Het
Nsf	A	T	11: 103,763,419 (GRCm39)	I395K	possibly damaging	Het
Nt5c1b	G	A	12: 10,425,449 (GRCm39)	V331I	probably damaging	Het
Or13a28	A	T	7: 140,217,829 (GRCm39)	I72F	probably damaging	Het
Pask	T	C	1: 93,265,246 (GRCm39)	D3G	probably damaging	Het
Pglyrp3	T	C	3: 91,933,037 (GRCm39)	V110A	possibly damaging	Het
Ppp4r3a	C	T	12: 101,019,825 (GRCm39)	V377M	probably damaging	Het
Prr12	A	G	7: 44,700,749 (GRCm39)		probably benign	Het
Ptdss1	G	A	13: 67,135,922 (GRCm39)		probably null	Het
Qser1	A	G	2: 104,620,246 (GRCm39)	S189P	probably damaging	Het
Rph3a	T	A	5: 121,092,551 (GRCm39)	Y350F	probably benign	Het
Skint4	A	T	4: 111,993,261 (GRCm39)	H328L	probably damaging	Het
Smyd4	G	A	11: 75,282,018 (GRCm39)	C497Y	probably damaging	Het
Stk11ip	T	C	1: 75,510,497 (GRCm39)	W864R	possibly damaging	Het
Stkld1	T	A	2: 26,841,757 (GRCm39)	V543E	probably damaging	Het
Taok2	A	G	7: 126,469,940 (GRCm39)	S963P	probably damaging	Het
Tars2	A	G	3: 95,653,959 (GRCm39)	L354P	probably damaging	Het
Tns2	C	T	15: 102,017,369 (GRCm39)	R281C	probably damaging	Het
Tpcn2	A	G	7: 144,821,079 (GRCm39)	L325P	probably damaging	Het
Trappc3l	C	G	10: 33,974,807 (GRCm39)	H96Q	probably benign	Het
Trim66	A	T	7: 109,056,796 (GRCm39)	Y1120*	probably null	Het
Trio	G	A	15: 27,881,428 (GRCm39)	Q548*	probably null	Het
Wipf2	T	A	11: 98,781,558 (GRCm39)	D32E	probably benign	Het

Other mutations in Or1e29

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01458:Or1e29	APN	11	73,667,532 (GRCm39)	missense	probably benign	0.44
IGL01766:Or1e29	APN	11	73,667,901 (GRCm39)	missense	probably benign	0.41
IGL01771:Or1e29	APN	11	73,667,490 (GRCm39)	missense	probably damaging	1.00
IGL02535:Or1e29	APN	11	73,667,442 (GRCm39)	missense	probably benign	0.00
IGL02639:Or1e29	APN	11	73,667,371 (GRCm39)	missense	probably benign	0.21
IGL03060:Or1e29	APN	11	73,667,289 (GRCm39)	missense	probably damaging	1.00
IGL03075:Or1e29	APN	11	73,667,298 (GRCm39)	missense	probably damaging	1.00
R0081:Or1e29	UTSW	11	73,667,935 (GRCm39)	missense	possibly damaging	0.59
R0426:Or1e29	UTSW	11	73,667,263 (GRCm39)	missense	probably benign	0.13
R1140:Or1e29	UTSW	11	73,667,680 (GRCm39)	missense	probably benign
R1638:Or1e29	UTSW	11	73,667,974 (GRCm39)	missense	possibly damaging	0.95
R2001:Or1e29	UTSW	11	73,667,539 (GRCm39)	missense	probably benign
R2214:Or1e29	UTSW	11	73,667,655 (GRCm39)	nonsense	probably null
R3076:Or1e29	UTSW	11	73,667,466 (GRCm39)	missense	possibly damaging	0.93
R3077:Or1e29	UTSW	11	73,667,466 (GRCm39)	missense	possibly damaging	0.93
R3078:Or1e29	UTSW	11	73,667,466 (GRCm39)	missense	possibly damaging	0.93
R3081:Or1e29	UTSW	11	73,668,051 (GRCm39)	missense	probably damaging	1.00
R3430:Or1e29	UTSW	11	73,667,365 (GRCm39)	missense	probably damaging	1.00
R3731:Or1e29	UTSW	11	73,667,565 (GRCm39)	missense	probably benign	0.08
R4090:Or1e29	UTSW	11	73,667,667 (GRCm39)	missense	probably damaging	1.00
R4303:Or1e29	UTSW	11	73,667,664 (GRCm39)	missense	possibly damaging	0.78
R4516:Or1e29	UTSW	11	73,667,866 (GRCm39)	missense	probably benign	0.06
R4556:Or1e29	UTSW	11	73,667,307 (GRCm39)	missense	possibly damaging	0.65
R4557:Or1e29	UTSW	11	73,667,307 (GRCm39)	missense	possibly damaging	0.65
R4858:Or1e29	UTSW	11	73,667,372 (GRCm39)	missense	probably benign	0.44
R5015:Or1e29	UTSW	11	73,668,007 (GRCm39)	missense	probably benign	0.07
R5087:Or1e29	UTSW	11	73,668,084 (GRCm39)	missense	possibly damaging	0.75
R6599:Or1e29	UTSW	11	73,667,506 (GRCm39)	missense	probably benign
R6701:Or1e29	UTSW	11	73,667,296 (GRCm39)	missense	probably damaging	1.00
R6784:Or1e29	UTSW	11	73,667,676 (GRCm39)	missense	probably damaging	1.00
R6916:Or1e29	UTSW	11	73,667,895 (GRCm39)	missense	probably benign	0.00
R7066:Or1e29	UTSW	11	73,668,018 (GRCm39)	missense	probably damaging	0.99
R7226:Or1e29	UTSW	11	73,667,503 (GRCm39)	missense	possibly damaging	0.95
R7457:Or1e29	UTSW	11	73,667,652 (GRCm39)	missense	probably benign	0.06
R7486:Or1e29	UTSW	11	73,667,847 (GRCm39)	missense	probably damaging	1.00
R7990:Or1e29	UTSW	11	73,667,497 (GRCm39)	missense	probably benign	0.00
R8289:Or1e29	UTSW	11	73,667,839 (GRCm39)	missense	probably benign
R9131:Or1e29	UTSW	11	73,668,150 (GRCm39)	start codon destroyed	probably null	1.00
R9160:Or1e29	UTSW	11	73,667,881 (GRCm39)	missense	probably benign	0.01
R9239:Or1e29	UTSW	11	73,667,346 (GRCm39)	missense	probably benign	0.00
R9666:Or1e29	UTSW	11	73,667,976 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GCATGTTCCATCCTTGTAGGTC -3'
(R):5'- CTTCTGAAGTTGTCTTGCTCAG -3'

Sequencing Primer
(F):5'- CCATCCTTGTAGGTCCTATGATGAG -3'
(R):5'- GCTCAGACACTTTTGTTAATGAGTTG -3'

Posted On

2015-12-29