Mutagenetix > Incidental Mutation

Incidental Mutation 'R7497:Dok4'

581140

Institutional Source

Beutler Lab

Gene Symbol

Dok4

Ensembl Gene

ENSMUSG00000040631

Gene Name

docking protein 4

Synonyms

MMRRC Submission

045570-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.519) question?

Stock #

R7497 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

95590456-95602940 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 95594053 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glutamic Acid at position 47 (D47E)

Ref Sequence

ENSEMBL: ENSMUSP00000043554 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000046461] [ENSMUST00000109521] [ENSMUST00000211892] [ENSMUST00000211939] [ENSMUST00000212745] [ENSMUST00000212810]

AlphaFold

Q99KE3

Predicted Effect

possibly damaging
Transcript: ENSMUST00000046461
AA Change: D47E

PolyPhen 2 Score 0.861 (Sensitivity: 0.83; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000043554
Gene: ENSMUSG00000040631
AA Change: D47E

Domain	Start	End	E-Value	Type
PH	8	114	5.09e-6	SMART
PTBI	130	232	2.82e-57	SMART
IRS	135	232	5.51e-40	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000109521

SMART Domains

Protein: ENSMUSP00000105147
Gene: ENSMUSG00000031783

Domain	Start	End	E-Value	Type
RPOLD	18	262	6.79e-105	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000211892

Predicted Effect

silent
Transcript: ENSMUST00000211939

Predicted Effect

probably benign
Transcript: ENSMUST00000212124

Predicted Effect

probably benign
Transcript: ENSMUST00000212745

Predicted Effect

possibly damaging
Transcript: ENSMUST00000212810
AA Change: D47E

PolyPhen 2 Score 0.861 (Sensitivity: 0.83; Specificity: 0.93)

Predicted Effect

probably benign
Transcript: ENSMUST00000212848

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.1%

Validation Efficiency

100% (70/70)

Allele List at MGI

Other mutations in this stock

Total: 67 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcd2	T	A	15: 91,075,379 (GRCm39)	I145F	probably benign	Het
Acvr2b	T	A	9: 119,262,352 (GRCm39)	V455E	probably benign	Het
Adgrv1	A	T	13: 81,588,344 (GRCm39)	V4414E	possibly damaging	Het
Agap2	T	C	10: 126,926,834 (GRCm39)	V977A	probably damaging	Het
Aph1b	A	C	9: 66,701,401 (GRCm39)	S79A	probably damaging	Het
Atm	G	A	9: 53,423,191 (GRCm39)	S645L	probably benign	Het
Cdh11	T	C	8: 103,400,456 (GRCm39)	R171G	probably benign	Het
Ces2f	T	A	8: 105,681,330 (GRCm39)	D556E	probably benign	Het
Cfap210	A	C	2: 69,588,792 (GRCm39)	N439K	probably benign	Het
Cyp26b1	C	A	6: 84,553,964 (GRCm39)	V218L	possibly damaging	Het
Diaph1	T	C	18: 38,028,353 (GRCm39)		probably null	Het
Dock1	A	G	7: 134,367,003 (GRCm39)	I482V	probably benign	Het
Dqx1	T	A	6: 83,036,028 (GRCm39)	L120Q	probably damaging	Het
Duxf3	A	T	10: 58,066,558 (GRCm39)	V157E	probably damaging	Het
Efcab3	T	C	11: 104,653,516 (GRCm39)		probably null	Het
Eif2a	C	A	3: 58,456,102 (GRCm39)	P367Q	probably damaging	Het
Elp2	C	T	18: 24,744,985 (GRCm39)	R102C	probably damaging	Het
Erich2	T	C	2: 70,364,666 (GRCm39)	S347P	probably damaging	Het
Fgfr3	GGACCTCTCCGTG	GG	5: 33,892,766 (GRCm39)		probably null	Het
Flacc1	T	A	1: 58,717,467 (GRCm39)	D148V	probably damaging	Het
Gadl1	A	T	9: 115,903,155 (GRCm39)	I495L	probably benign	Het
Gcnt4	A	G	13: 97,083,468 (GRCm39)	T255A	possibly damaging	Het
Gm10972	A	G	3: 94,550,887 (GRCm39)	K21E	unknown	Het
Gm57859	T	A	11: 113,583,223 (GRCm39)	W517R	probably damaging	Het
Gm7361	C	A	5: 26,466,188 (GRCm39)	H183Q	probably benign	Het
Gp2	C	T	7: 119,053,829 (GRCm39)	C44Y	probably damaging	Het
Hcar2	C	T	5: 124,003,249 (GRCm39)	V85I	probably benign	Het
Hira	T	C	16: 18,770,829 (GRCm39)	V822A	probably damaging	Het
Ighv1-5	T	A	12: 114,477,156 (GRCm39)	T49S	probably damaging	Het
Ints1	C	T	5: 139,754,731 (GRCm39)	V603M	probably damaging	Het
Kdm2a	A	C	19: 4,374,404 (GRCm39)	L909R	probably damaging	Het
Klkb1	T	A	8: 45,747,827 (GRCm39)		probably benign	Het
Krit1	A	G	5: 3,862,349 (GRCm39)	H168R	possibly damaging	Het
Map3k21	A	T	8: 126,654,340 (GRCm39)	E386D	probably damaging	Het
Muc16	C	T	9: 18,556,385 (GRCm39)	E3303K	unknown	Het
Muc5b	T	G	7: 141,415,250 (GRCm39)	V2732G	possibly damaging	Het
Myo5a	T	C	9: 75,104,983 (GRCm39)	L189P		Het
Nlrc5	T	C	8: 95,248,598 (GRCm39)	L1740S	probably damaging	Het
Nolc1	A	G	19: 46,071,257 (GRCm39)	K402R	probably benign	Het
Or4b1b	T	A	2: 90,112,098 (GRCm39)	T274S	possibly damaging	Het
Or4k15	T	A	14: 50,364,952 (GRCm39)	L306Q	probably benign	Het
Or52s19	T	C	7: 103,008,219 (GRCm39)	M61V	probably damaging	Het
Or8u8	T	C	2: 86,012,417 (GRCm39)	I13V	probably benign	Het
Pnma8b	A	G	7: 16,678,874 (GRCm39)		probably benign	Het
Pnpt1	A	T	11: 29,080,860 (GRCm39)	M35L	probably benign	Het
Postn	A	G	3: 54,270,091 (GRCm39)	K57E	probably damaging	Het
Ppp1r9a	A	C	6: 4,905,775 (GRCm39)	D110A	probably damaging	Het
Pptc7	G	A	5: 122,422,942 (GRCm39)	V71M	possibly damaging	Het
Prdm11	T	A	2: 92,843,052 (GRCm39)	I136F	possibly damaging	Het
Rfc1	A	G	5: 65,436,841 (GRCm39)	L613P	probably damaging	Het
Ryr3	T	C	2: 112,560,818 (GRCm39)	D2981G	probably benign	Het
Sbf2	C	A	7: 110,213,923 (GRCm39)	E16*	probably null	Het
Scara3	T	C	14: 66,168,651 (GRCm39)	E322G	probably damaging	Het
Sema5b	T	A	16: 35,481,700 (GRCm39)	C893S	probably damaging	Het
Setdb1	T	C	3: 95,249,139 (GRCm39)	D323G	probably damaging	Het
Slc19a3	T	C	1: 82,991,649 (GRCm39)	Y453C	probably damaging	Het
Snx5	T	C	2: 144,099,894 (GRCm39)	K137E	probably damaging	Het
Taar8c	G	A	10: 23,977,116 (GRCm39)	T232I	probably benign	Het
Taok2	G	A	7: 126,474,050 (GRCm39)	T352I	probably damaging	Het
Ttc3	C	A	16: 94,219,541 (GRCm39)	R489S	possibly damaging	Het
Usp12	A	T	5: 146,689,264 (GRCm39)		probably null	Het
Usp16	T	A	16: 87,263,174 (GRCm39)	C125*	probably null	Het
Vmn2r106	C	T	17: 20,488,201 (GRCm39)	E733K	probably damaging	Het
Vps13b	T	A	15: 35,876,843 (GRCm39)	I2832K	probably benign	Het
Vps13c	A	G	9: 67,747,761 (GRCm39)	Y18C	probably damaging	Het
Zfp160	T	A	17: 21,246,455 (GRCm39)	I335K	probably benign	Het
Zfp788	A	T	7: 41,298,275 (GRCm39)	I304F	possibly damaging	Het

Other mutations in Dok4

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01568:Dok4	APN	8	95,593,430 (GRCm39)	missense	probably benign	0.13
IGL02955:Dok4	APN	8	95,592,256 (GRCm39)	missense	probably damaging	1.00
R0133:Dok4	UTSW	8	95,591,991 (GRCm39)	missense	probably benign	0.05
R0492:Dok4	UTSW	8	95,591,764 (GRCm39)	missense	probably benign	0.00
R0538:Dok4	UTSW	8	95,591,866 (GRCm39)	missense	probably damaging	1.00
R0689:Dok4	UTSW	8	95,597,547 (GRCm39)	missense	probably benign	0.17
R2261:Dok4	UTSW	8	95,593,140 (GRCm39)	missense	probably damaging	0.96
R2262:Dok4	UTSW	8	95,593,140 (GRCm39)	missense	probably damaging	0.96
R2263:Dok4	UTSW	8	95,593,140 (GRCm39)	missense	probably damaging	0.96
R4234:Dok4	UTSW	8	95,592,292 (GRCm39)	missense	probably damaging	1.00
R4771:Dok4	UTSW	8	95,591,795 (GRCm39)	splice site	probably null
R7674:Dok4	UTSW	8	95,593,190 (GRCm39)	missense	probably damaging	1.00
R9299:Dok4	UTSW	8	95,593,469 (GRCm39)	missense	probably benign
R9337:Dok4	UTSW	8	95,593,469 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- GACGTTGCTAATCTCAGTCACC -3'
(R):5'- TCTCTAAGCTAGGATCCAGGG -3'

Sequencing Primer
(F):5'- GTTGCTAATCTCAGTCACCTGGAAAG -3'
(R):5'- GAAGGGTGTAGTATTGCTCCC -3'

Posted On

2019-10-17