Mutagenetix > Incidental Mutation

Incidental Mutation 'R7497:Gm57859'

581156

Institutional Source

Beutler Lab

Gene Symbol

Gm57859

Ensembl Gene

ENSMUSG00000041623

Gene Name

predicted gene, 57859

Synonyms

D11Wsu47e

MMRRC Submission

045570-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.062) question?

Stock #

R7497 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

113575238-113585473 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 113583223 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tryptophan to Arginine at position 517 (W517R)

Ref Sequence

ENSEMBL: ENSMUSP00000042025 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000042227] [ENSMUST00000106621] [ENSMUST00000123466] [ENSMUST00000153732]

AlphaFold

Q6PIX9

Predicted Effect

probably damaging
Transcript: ENSMUST00000042227
AA Change: W517R

PolyPhen 2 Score 0.974 (Sensitivity: 0.76; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000042025
Gene: ENSMUSG00000041623
AA Change: W517R

Domain	Start	End	E-Value	Type
low complexity region	273	283	N/A	INTRINSIC
low complexity region	491	510	N/A	INTRINSIC
transmembrane domain	529	548	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000106621
AA Change: W517R

PolyPhen 2 Score 0.974 (Sensitivity: 0.76; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000102232
Gene: ENSMUSG00000041623
AA Change: W517R

Domain	Start	End	E-Value	Type
low complexity region	273	283	N/A	INTRINSIC
low complexity region	491	510	N/A	INTRINSIC
transmembrane domain	529	548	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000123466

Predicted Effect

probably benign
Transcript: ENSMUST00000153732

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.1%

Validation Efficiency

100% (70/70)

Allele List at MGI

Other mutations in this stock

Total: 67 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcd2	T	A	15: 91,075,379 (GRCm39)	I145F	probably benign	Het
Acvr2b	T	A	9: 119,262,352 (GRCm39)	V455E	probably benign	Het
Adgrv1	A	T	13: 81,588,344 (GRCm39)	V4414E	possibly damaging	Het
Agap2	T	C	10: 126,926,834 (GRCm39)	V977A	probably damaging	Het
Aph1b	A	C	9: 66,701,401 (GRCm39)	S79A	probably damaging	Het
Atm	G	A	9: 53,423,191 (GRCm39)	S645L	probably benign	Het
Cdh11	T	C	8: 103,400,456 (GRCm39)	R171G	probably benign	Het
Ces2f	T	A	8: 105,681,330 (GRCm39)	D556E	probably benign	Het
Cfap210	A	C	2: 69,588,792 (GRCm39)	N439K	probably benign	Het
Cyp26b1	C	A	6: 84,553,964 (GRCm39)	V218L	possibly damaging	Het
Diaph1	T	C	18: 38,028,353 (GRCm39)		probably null	Het
Dock1	A	G	7: 134,367,003 (GRCm39)	I482V	probably benign	Het
Dok4	A	T	8: 95,594,053 (GRCm39)	D47E	possibly damaging	Het
Dqx1	T	A	6: 83,036,028 (GRCm39)	L120Q	probably damaging	Het
Duxf3	A	T	10: 58,066,558 (GRCm39)	V157E	probably damaging	Het
Efcab3	T	C	11: 104,653,516 (GRCm39)		probably null	Het
Eif2a	C	A	3: 58,456,102 (GRCm39)	P367Q	probably damaging	Het
Elp2	C	T	18: 24,744,985 (GRCm39)	R102C	probably damaging	Het
Erich2	T	C	2: 70,364,666 (GRCm39)	S347P	probably damaging	Het
Fgfr3	GGACCTCTCCGTG	GG	5: 33,892,766 (GRCm39)		probably null	Het
Flacc1	T	A	1: 58,717,467 (GRCm39)	D148V	probably damaging	Het
Gadl1	A	T	9: 115,903,155 (GRCm39)	I495L	probably benign	Het
Gcnt4	A	G	13: 97,083,468 (GRCm39)	T255A	possibly damaging	Het
Gm10972	A	G	3: 94,550,887 (GRCm39)	K21E	unknown	Het
Gm7361	C	A	5: 26,466,188 (GRCm39)	H183Q	probably benign	Het
Gp2	C	T	7: 119,053,829 (GRCm39)	C44Y	probably damaging	Het
Hcar2	C	T	5: 124,003,249 (GRCm39)	V85I	probably benign	Het
Hira	T	C	16: 18,770,829 (GRCm39)	V822A	probably damaging	Het
Ighv1-5	T	A	12: 114,477,156 (GRCm39)	T49S	probably damaging	Het
Ints1	C	T	5: 139,754,731 (GRCm39)	V603M	probably damaging	Het
Kdm2a	A	C	19: 4,374,404 (GRCm39)	L909R	probably damaging	Het
Klkb1	T	A	8: 45,747,827 (GRCm39)		probably benign	Het
Krit1	A	G	5: 3,862,349 (GRCm39)	H168R	possibly damaging	Het
Map3k21	A	T	8: 126,654,340 (GRCm39)	E386D	probably damaging	Het
Muc16	C	T	9: 18,556,385 (GRCm39)	E3303K	unknown	Het
Muc5b	T	G	7: 141,415,250 (GRCm39)	V2732G	possibly damaging	Het
Myo5a	T	C	9: 75,104,983 (GRCm39)	L189P		Het
Nlrc5	T	C	8: 95,248,598 (GRCm39)	L1740S	probably damaging	Het
Nolc1	A	G	19: 46,071,257 (GRCm39)	K402R	probably benign	Het
Or4b1b	T	A	2: 90,112,098 (GRCm39)	T274S	possibly damaging	Het
Or4k15	T	A	14: 50,364,952 (GRCm39)	L306Q	probably benign	Het
Or52s19	T	C	7: 103,008,219 (GRCm39)	M61V	probably damaging	Het
Or8u8	T	C	2: 86,012,417 (GRCm39)	I13V	probably benign	Het
Pnma8b	A	G	7: 16,678,874 (GRCm39)		probably benign	Het
Pnpt1	A	T	11: 29,080,860 (GRCm39)	M35L	probably benign	Het
Postn	A	G	3: 54,270,091 (GRCm39)	K57E	probably damaging	Het
Ppp1r9a	A	C	6: 4,905,775 (GRCm39)	D110A	probably damaging	Het
Pptc7	G	A	5: 122,422,942 (GRCm39)	V71M	possibly damaging	Het
Prdm11	T	A	2: 92,843,052 (GRCm39)	I136F	possibly damaging	Het
Rfc1	A	G	5: 65,436,841 (GRCm39)	L613P	probably damaging	Het
Ryr3	T	C	2: 112,560,818 (GRCm39)	D2981G	probably benign	Het
Sbf2	C	A	7: 110,213,923 (GRCm39)	E16*	probably null	Het
Scara3	T	C	14: 66,168,651 (GRCm39)	E322G	probably damaging	Het
Sema5b	T	A	16: 35,481,700 (GRCm39)	C893S	probably damaging	Het
Setdb1	T	C	3: 95,249,139 (GRCm39)	D323G	probably damaging	Het
Slc19a3	T	C	1: 82,991,649 (GRCm39)	Y453C	probably damaging	Het
Snx5	T	C	2: 144,099,894 (GRCm39)	K137E	probably damaging	Het
Taar8c	G	A	10: 23,977,116 (GRCm39)	T232I	probably benign	Het
Taok2	G	A	7: 126,474,050 (GRCm39)	T352I	probably damaging	Het
Ttc3	C	A	16: 94,219,541 (GRCm39)	R489S	possibly damaging	Het
Usp12	A	T	5: 146,689,264 (GRCm39)		probably null	Het
Usp16	T	A	16: 87,263,174 (GRCm39)	C125*	probably null	Het
Vmn2r106	C	T	17: 20,488,201 (GRCm39)	E733K	probably damaging	Het
Vps13b	T	A	15: 35,876,843 (GRCm39)	I2832K	probably benign	Het
Vps13c	A	G	9: 67,747,761 (GRCm39)	Y18C	probably damaging	Het
Zfp160	T	A	17: 21,246,455 (GRCm39)	I335K	probably benign	Het
Zfp788	A	T	7: 41,298,275 (GRCm39)	I304F	possibly damaging	Het

Other mutations in Gm57859

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01097:Gm57859	APN	11	113,583,296 (GRCm39)	missense	probably benign	0.19
IGL01701:Gm57859	APN	11	113,579,927 (GRCm39)	missense	probably benign	0.27
R0483:Gm57859	UTSW	11	113,580,021 (GRCm39)	missense	possibly damaging	0.92
R0601:Gm57859	UTSW	11	113,578,712 (GRCm39)	missense	probably benign	0.38
R1567:Gm57859	UTSW	11	113,578,728 (GRCm39)	missense	probably damaging	0.99
R4834:Gm57859	UTSW	11	113,579,805 (GRCm39)	missense	probably benign	0.03
R4923:Gm57859	UTSW	11	113,579,805 (GRCm39)	missense	probably benign	0.03
R5194:Gm57859	UTSW	11	113,579,654 (GRCm39)	missense	possibly damaging	0.83
R5779:Gm57859	UTSW	11	113,578,818 (GRCm39)	missense	probably benign	0.02
R5815:Gm57859	UTSW	11	113,578,783 (GRCm39)	splice site	probably null
R6174:Gm57859	UTSW	11	113,579,801 (GRCm39)	missense	possibly damaging	0.46
R6566:Gm57859	UTSW	11	113,578,824 (GRCm39)	missense	probably damaging	0.96
R6837:Gm57859	UTSW	11	113,579,439 (GRCm39)	missense	possibly damaging	0.90
R6974:Gm57859	UTSW	11	113,578,818 (GRCm39)	missense	probably benign	0.02
R9439:Gm57859	UTSW	11	113,583,229 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- AGCTTAGCCCTGCTGTCTATTG -3'
(R):5'- GCAGAGACCTTTAACGGACTC -3'

Sequencing Primer
(F):5'- GCCCTGCTGTCTATTGAATTAACATG -3'
(R):5'- GAGACCTTTAACGGACTCCACAG -3'

Posted On

2019-10-17