Mutagenetix > Incidental Mutations

Incidental Mutation 'R1901:Ncor2'

212195

Institutional Source

Beutler Lab

Gene Symbol

Ncor2

Ensembl Gene

ENSMUSG00000029478

Gene Name

nuclear receptor co-repressor 2

Synonyms

SMRT, SMRTe

MMRRC Submission

039921-MU

Accession Numbers

Ncbi RefSeq: NM_011424.3, NM_001253904.1, NM_001253905.1; MGI:1337080

Is this an essential gene?

Essential (E-score: 1.000) question?

Stock #

R1901 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

125017153-125179219 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 125025425 bp

Zygosity

Heterozygous

Amino Acid Change

Histidine to Leucine at position 2089 (H2089L)

Ref Sequence

ENSEMBL: ENSMUSP00000083250 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000055256] [ENSMUST00000086083] [ENSMUST00000111393] [ENSMUST00000111394] [ENSMUST00000111398] [ENSMUST00000111402] [ENSMUST00000138890]

Predicted Effect

probably benign
Transcript: ENSMUST00000055256
AA Change: H2094L

PolyPhen 2 Score 0.386 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000055954
Gene: ENSMUSG00000029478
AA Change: H2094L

Domain	Start	End	E-Value	Type
low complexity region	147	154	N/A	INTRINSIC
coiled coil region	167	207	N/A	INTRINSIC
SANT	428	476	4.42e-6	SMART
coiled coil region	494	550	N/A	INTRINSIC
SANT	607	655	1.43e-14	SMART
low complexity region	668	686	N/A	INTRINSIC
low complexity region	699	726	N/A	INTRINSIC
low complexity region	768	813	N/A	INTRINSIC
low complexity region	822	828	N/A	INTRINSIC
low complexity region	848	860	N/A	INTRINSIC
low complexity region	867	874	N/A	INTRINSIC
low complexity region	905	919	N/A	INTRINSIC
low complexity region	935	944	N/A	INTRINSIC
low complexity region	989	1000	N/A	INTRINSIC
low complexity region	1011	1025	N/A	INTRINSIC
low complexity region	1027	1043	N/A	INTRINSIC
low complexity region	1086	1096	N/A	INTRINSIC
low complexity region	1100	1116	N/A	INTRINSIC
low complexity region	1366	1380	N/A	INTRINSIC
low complexity region	1481	1497	N/A	INTRINSIC
low complexity region	1616	1622	N/A	INTRINSIC
low complexity region	1709	1726	N/A	INTRINSIC
low complexity region	1737	1754	N/A	INTRINSIC
low complexity region	1764	1776	N/A	INTRINSIC
low complexity region	1800	1807	N/A	INTRINSIC
low complexity region	1921	1939	N/A	INTRINSIC
low complexity region	1959	1975	N/A	INTRINSIC
low complexity region	2062	2076	N/A	INTRINSIC
PDB:2GPV\|I	2293	2314	8e-8	PDB
low complexity region	2324	2336	N/A	INTRINSIC
low complexity region	2433	2453	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000086083
AA Change: H2089L

PolyPhen 2 Score 0.390 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000083250
Gene: ENSMUSG00000029478
AA Change: H2089L

Domain	Start	End	E-Value	Type
low complexity region	147	154	N/A	INTRINSIC
coiled coil region	167	207	N/A	INTRINSIC
SANT	428	476	4.42e-6	SMART
coiled coil region	494	550	N/A	INTRINSIC
SANT	607	655	1.43e-14	SMART
low complexity region	668	686	N/A	INTRINSIC
low complexity region	699	726	N/A	INTRINSIC
low complexity region	768	813	N/A	INTRINSIC
low complexity region	822	828	N/A	INTRINSIC
low complexity region	848	860	N/A	INTRINSIC
low complexity region	867	874	N/A	INTRINSIC
low complexity region	905	919	N/A	INTRINSIC
low complexity region	935	944	N/A	INTRINSIC
low complexity region	988	999	N/A	INTRINSIC
low complexity region	1010	1024	N/A	INTRINSIC
low complexity region	1026	1042	N/A	INTRINSIC
low complexity region	1085	1095	N/A	INTRINSIC
low complexity region	1099	1115	N/A	INTRINSIC
low complexity region	1364	1378	N/A	INTRINSIC
low complexity region	1479	1495	N/A	INTRINSIC
low complexity region	1614	1620	N/A	INTRINSIC
low complexity region	1707	1724	N/A	INTRINSIC
low complexity region	1735	1752	N/A	INTRINSIC
low complexity region	1762	1774	N/A	INTRINSIC
low complexity region	1798	1805	N/A	INTRINSIC
low complexity region	1916	1934	N/A	INTRINSIC
low complexity region	1954	1970	N/A	INTRINSIC
low complexity region	2057	2071	N/A	INTRINSIC
PDB:2GPV\|I	2288	2309	8e-8	PDB
low complexity region	2319	2331	N/A	INTRINSIC
low complexity region	2428	2448	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000111393
AA Change: H1953L

PolyPhen 2 Score 0.386 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000107024
Gene: ENSMUSG00000029478
AA Change: H1953L

Domain	Start	End	E-Value	Type
coiled coil region	1	32	N/A	INTRINSIC
SANT	253	301	4.42e-6	SMART
coiled coil region	319	375	N/A	INTRINSIC
SANT	432	480	1.43e-14	SMART
low complexity region	493	511	N/A	INTRINSIC
low complexity region	524	551	N/A	INTRINSIC
low complexity region	593	638	N/A	INTRINSIC
low complexity region	647	653	N/A	INTRINSIC
low complexity region	673	685	N/A	INTRINSIC
low complexity region	692	699	N/A	INTRINSIC
low complexity region	730	744	N/A	INTRINSIC
low complexity region	760	769	N/A	INTRINSIC
low complexity region	813	824	N/A	INTRINSIC
low complexity region	835	849	N/A	INTRINSIC
low complexity region	851	867	N/A	INTRINSIC
low complexity region	910	920	N/A	INTRINSIC
low complexity region	924	940	N/A	INTRINSIC
low complexity region	1225	1239	N/A	INTRINSIC
low complexity region	1340	1356	N/A	INTRINSIC
low complexity region	1475	1481	N/A	INTRINSIC
low complexity region	1568	1585	N/A	INTRINSIC
low complexity region	1596	1613	N/A	INTRINSIC
low complexity region	1623	1635	N/A	INTRINSIC
low complexity region	1659	1666	N/A	INTRINSIC
low complexity region	1780	1798	N/A	INTRINSIC
low complexity region	1818	1834	N/A	INTRINSIC
low complexity region	1921	1935	N/A	INTRINSIC
PDB:2GPV\|I	2152	2173	7e-8	PDB
low complexity region	2183	2195	N/A	INTRINSIC
low complexity region	2292	2312	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000111394
AA Change: H1874L

PolyPhen 2 Score 0.368 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000107025
Gene: ENSMUSG00000029478
AA Change: H1874L

Domain	Start	End	E-Value	Type
SANT	209	257	4.42e-6	SMART
coiled coil region	275	331	N/A	INTRINSIC
SANT	388	436	1.43e-14	SMART
low complexity region	449	467	N/A	INTRINSIC
low complexity region	480	507	N/A	INTRINSIC
low complexity region	549	594	N/A	INTRINSIC
low complexity region	603	609	N/A	INTRINSIC
low complexity region	629	641	N/A	INTRINSIC
low complexity region	648	655	N/A	INTRINSIC
low complexity region	686	700	N/A	INTRINSIC
low complexity region	716	725	N/A	INTRINSIC
low complexity region	769	780	N/A	INTRINSIC
low complexity region	791	805	N/A	INTRINSIC
low complexity region	807	823	N/A	INTRINSIC
low complexity region	866	876	N/A	INTRINSIC
low complexity region	880	896	N/A	INTRINSIC
low complexity region	1146	1160	N/A	INTRINSIC
low complexity region	1261	1277	N/A	INTRINSIC
low complexity region	1396	1402	N/A	INTRINSIC
low complexity region	1489	1506	N/A	INTRINSIC
low complexity region	1517	1534	N/A	INTRINSIC
low complexity region	1544	1556	N/A	INTRINSIC
low complexity region	1580	1587	N/A	INTRINSIC
low complexity region	1701	1719	N/A	INTRINSIC
low complexity region	1739	1755	N/A	INTRINSIC
low complexity region	1842	1856	N/A	INTRINSIC
PDB:2GPV\|I	2073	2094	7e-8	PDB
low complexity region	2104	2116	N/A	INTRINSIC
low complexity region	2213	2233	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000111398
AA Change: H2093L

PolyPhen 2 Score 0.386 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000107029
Gene: ENSMUSG00000029478
AA Change: H2093L

Domain	Start	End	E-Value	Type
low complexity region	147	154	N/A	INTRINSIC
coiled coil region	167	207	N/A	INTRINSIC
SANT	428	476	4.42e-6	SMART
coiled coil region	494	550	N/A	INTRINSIC
SANT	607	655	1.43e-14	SMART
low complexity region	668	686	N/A	INTRINSIC
low complexity region	699	726	N/A	INTRINSIC
low complexity region	768	813	N/A	INTRINSIC
low complexity region	822	828	N/A	INTRINSIC
low complexity region	848	860	N/A	INTRINSIC
low complexity region	867	874	N/A	INTRINSIC
low complexity region	905	919	N/A	INTRINSIC
low complexity region	935	944	N/A	INTRINSIC
low complexity region	988	999	N/A	INTRINSIC
low complexity region	1010	1024	N/A	INTRINSIC
low complexity region	1026	1042	N/A	INTRINSIC
low complexity region	1085	1095	N/A	INTRINSIC
low complexity region	1099	1115	N/A	INTRINSIC
low complexity region	1365	1379	N/A	INTRINSIC
low complexity region	1480	1496	N/A	INTRINSIC
low complexity region	1615	1621	N/A	INTRINSIC
low complexity region	1708	1725	N/A	INTRINSIC
low complexity region	1736	1753	N/A	INTRINSIC
low complexity region	1763	1775	N/A	INTRINSIC
low complexity region	1799	1806	N/A	INTRINSIC
low complexity region	1920	1938	N/A	INTRINSIC
low complexity region	1958	1974	N/A	INTRINSIC
low complexity region	2061	2075	N/A	INTRINSIC
PDB:2GPV\|I	2292	2313	8e-8	PDB
low complexity region	2323	2335	N/A	INTRINSIC
low complexity region	2432	2452	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000111402
AA Change: H2128L

PolyPhen 2 Score 0.235 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000107033
Gene: ENSMUSG00000029478
AA Change: H2128L

Domain	Start	End	E-Value	Type
Pfam:GPS2_interact	141	229	4.9e-41	PFAM
SANT	428	476	4.42e-6	SMART
coiled coil region	494	550	N/A	INTRINSIC
SANT	607	655	1.43e-14	SMART
low complexity region	668	686	N/A	INTRINSIC
low complexity region	699	726	N/A	INTRINSIC
low complexity region	768	813	N/A	INTRINSIC
low complexity region	822	828	N/A	INTRINSIC
low complexity region	848	860	N/A	INTRINSIC
low complexity region	867	874	N/A	INTRINSIC
low complexity region	905	919	N/A	INTRINSIC
low complexity region	935	944	N/A	INTRINSIC
low complexity region	988	999	N/A	INTRINSIC
low complexity region	1010	1024	N/A	INTRINSIC
low complexity region	1026	1042	N/A	INTRINSIC
low complexity region	1085	1095	N/A	INTRINSIC
low complexity region	1099	1115	N/A	INTRINSIC
low complexity region	1400	1414	N/A	INTRINSIC
low complexity region	1515	1531	N/A	INTRINSIC
low complexity region	1650	1656	N/A	INTRINSIC
low complexity region	1743	1760	N/A	INTRINSIC
low complexity region	1771	1788	N/A	INTRINSIC
low complexity region	1798	1810	N/A	INTRINSIC
low complexity region	1834	1841	N/A	INTRINSIC
low complexity region	1955	1973	N/A	INTRINSIC
low complexity region	1993	2009	N/A	INTRINSIC
low complexity region	2096	2110	N/A	INTRINSIC
PDB:2GPV\|I	2327	2348	8e-8	PDB
low complexity region	2358	2370	N/A	INTRINSIC
low complexity region	2467	2487	N/A	INTRINSIC

Predicted Effect

unknown
Transcript: ENSMUST00000125053
AA Change: H1172L

SMART Domains

Protein: ENSMUSP00000117098
Gene: ENSMUSG00000029478
AA Change: H1172L

Domain	Start	End	E-Value	Type
low complexity region	36	47	N/A	INTRINSIC
low complexity region	58	72	N/A	INTRINSIC
low complexity region	74	90	N/A	INTRINSIC
low complexity region	133	143	N/A	INTRINSIC
low complexity region	147	163	N/A	INTRINSIC
low complexity region	448	462	N/A	INTRINSIC
low complexity region	563	579	N/A	INTRINSIC
low complexity region	698	704	N/A	INTRINSIC
low complexity region	791	808	N/A	INTRINSIC
low complexity region	819	836	N/A	INTRINSIC
low complexity region	846	858	N/A	INTRINSIC
low complexity region	882	889	N/A	INTRINSIC
low complexity region	1000	1018	N/A	INTRINSIC
low complexity region	1038	1054	N/A	INTRINSIC
low complexity region	1141	1155	N/A	INTRINSIC
PDB:2GPV\|I	1372	1393	5e-8	PDB
low complexity region	1403	1415	N/A	INTRINSIC
low complexity region	1512	1532	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000130742

Predicted Effect

unknown
Transcript: ENSMUST00000134819
AA Change: H176L

SMART Domains

Protein: ENSMUSP00000115776
Gene: ENSMUSG00000029478
AA Change: H176L

Domain	Start	End	E-Value	Type
low complexity region	4	20	N/A	INTRINSIC
low complexity region	145	159	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000138890
AA Change: H33L

PolyPhen 2 Score 0.058 (Sensitivity: 0.94; Specificity: 0.84)

SMART Domains

Protein: ENSMUSP00000117813
Gene: ENSMUSG00000029478
AA Change: H33L

Domain	Start	End	E-Value	Type
low complexity region	178	186	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000144354

Predicted Effect

probably benign
Transcript: ENSMUST00000200297

Coding Region Coverage

1x: 97.3%
3x: 96.8%
10x: 95.2%
20x: 92.5%

Validation Efficiency

MGI Phenotype

Strain: 3765904; 4329504
Lethality: E1-E16
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a nuclear receptor co-repressor that mediates transcriptional silencing of certain target genes. The encoded protein is a member of a family of thyroid hormone- and retinoic acid receptor-associated co-repressors. This protein acts as part of a multisubunit complex which includes histone deacetylases to modify chromatin structure that prevents basal transcriptional activity of target genes. Aberrant expression of this gene is associated with certain cancers. Alternate splicing results in multiple transcript variants encoding different isoforms.[provided by RefSeq, Apr 2011]
PHENOTYPE: Mice homozygous for a null allele die before E16.5 of heart defects and exhibit neural defects. [provided by MGI curators]

Allele List at MGI

All alleles(145) : Targeted(2) Gene trapped(143)

Other mutations in this stock

Total: 94 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca15	A	G	7: 120,346,099	E466G	probably damaging	Het
Acacb	A	T	5: 114,165,734	R73*	probably null	Het
Acta1	A	T	8: 123,893,161	S147T	probably benign	Het
Adh1	G	A	3: 138,288,797	V293I	probably benign	Het
Aldh3b3	T	C	19: 3,965,130	Y170H	probably damaging	Het
Ank3	A	T	10: 69,822,337	T198S	probably damaging	Het
Ankrd12	A	T	17: 65,986,703	N578K	possibly damaging	Het
Ano2	A	T	6: 125,872,684	E126D	probably damaging	Het
Anpep	C	T	7: 79,838,256	E518K	probably benign	Het
Arhgef7	C	A	8: 11,808,713		probably null	Het
Cfap44	A	C	16: 44,422,374	T714P	probably benign	Het
Cnot1	T	C	8: 95,743,121	I1369V	possibly damaging	Het
Col19a1	A	T	1: 24,536,997	I88K	unknown	Het
Col1a1	G	A	11: 94,946,632		probably null	Het
Col5a1	A	G	2: 27,960,444	T518A	unknown	Het
Cul7	T	C	17: 46,655,740	L365P	probably damaging	Het
Dlec1	T	C	9: 119,102,644	S44P	probably damaging	Het
Dock9	T	C	14: 121,625,153		probably null	Het
Flrt2	C	A	12: 95,779,130	P81T	probably damaging	Het
Flrt2	C	T	12: 95,779,131	P81L	probably damaging	Het
Ginm1	A	G	10: 7,775,216		probably null	Het
Glis3	T	C	19: 28,531,585	N333S	probably damaging	Het
Glo1	T	G	17: 30,596,408	E144D	probably benign	Het
Golga1	A	T	2: 39,047,780		probably null	Het
H2-Aa	A	G	17: 34,283,233	I155T	possibly damaging	Het
Haus5	A	G	7: 30,657,245	S479P	probably damaging	Het
Il10ra	A	T	9: 45,256,356	V299D	probably benign	Het
Il17re	T	C	6: 113,469,704	V472A	probably damaging	Het
Il22ra1	A	T	4: 135,750,908	Q430L	probably damaging	Het
Il23r	A	C	6: 67,423,734	D537E	probably benign	Het
Inppl1	T	C	7: 101,823,377	E1237G	possibly damaging	Het
Ip6k1	G	A	9: 108,040,996	E77K	possibly damaging	Het
Klhl35	T	C	7: 99,470,220	L304P	probably damaging	Het
Krt78	A	T	15: 101,946,963	C804*	probably null	Het
Lrrc29	T	C	8: 105,313,075	N556S	probably damaging	Het
Med15	G	T	16: 17,673,154		probably benign	Het
Mettl25	A	G	10: 105,826,087	S341P	probably damaging	Het
Mroh1	A	G	15: 76,436,049	T1008A	probably benign	Het
Mug1	A	G	6: 121,881,821	D1166G	probably benign	Het
Mug2	C	A	6: 122,071,842	H856N	probably benign	Het
Naca	T	A	10: 128,043,721		probably benign	Het
Nagk	G	T	6: 83,799,354	V184F	probably damaging	Het
Nav1	T	G	1: 135,472,410	N474T	probably benign	Het
Nek6	A	G	2: 38,582,446	I261V	probably damaging	Het
Neurod2	G	A	11: 98,327,732	T202M	probably damaging	Het
Nlgn2	A	G	11: 69,825,900	V605A	probably damaging	Het
Nlrp5	A	C	7: 23,423,910	E732A	possibly damaging	Het
Nt5dc1	A	T	10: 34,313,671	V340D	probably damaging	Het
Ntn4	A	G	10: 93,707,372	D320G	possibly damaging	Het
Olfr119	T	A	17: 37,701,421	H250Q	probably damaging	Het
Olfr209	A	T	16: 59,362,163	D18E	probably benign	Het
Olfr417	A	T	1: 174,369,168	I84L	probably benign	Het
Olfr625-ps1	T	C	7: 103,683,543	I265T	probably damaging	Het
Olfr685	A	G	7: 105,180,872	I162T	possibly damaging	Het
Osbpl5	T	C	7: 143,703,181	D404G	possibly damaging	Het
Pcdhb12	T	A	18: 37,437,630	W610R	possibly damaging	Het
Pias2	T	A	18: 77,097,443	C66*	probably null	Het
Plec	T	A	15: 76,175,551	E3417D	probably damaging	Het
Plekhm3	CCTGCTGCTGCTGCTGCTGCTGCTGC	CCTGCTGCTGCTGCTGCTGCTGC	1: 64,937,781		probably benign	Het
Ppp1r12a	T	A	10: 108,198,891	I99N	probably damaging	Het
Prpf8	T	G	11: 75,504,744	V1899G	probably damaging	Het
Prr13	C	A	15: 102,460,698		probably benign	Het
Ptchd4	A	T	17: 42,503,616	I803L	probably benign	Het
R3hdm2	T	C	10: 127,498,468	I947T	possibly damaging	Het
Raet1d	A	G	10: 22,371,451	D142G	probably damaging	Het
Rbbp8nl	C	T	2: 180,283,313	R33Q	probably damaging	Het
Robo1	A	G	16: 72,960,204	Q351R	probably null	Het
Rptn	A	T	3: 93,396,710	H450L	possibly damaging	Het
Scn11a	T	A	9: 119,779,036	K1010*	probably null	Het
Slc16a10	G	A	10: 40,056,606	Q33*	probably null	Het
Slc31a1	C	T	4: 62,385,605		probably benign	Het
Slc34a1	A	T	13: 55,401,150	K138*	probably null	Het
Slc6a18	T	A	13: 73,670,043	E285V	probably benign	Het
Slco6c1	T	A	1: 97,072,982	T515S	probably damaging	Het
Snrnp40	T	A	4: 130,385,975	S295T	probably damaging	Het
Snx4	A	T	16: 33,284,438	Y252F	possibly damaging	Het
Spata18	T	A	5: 73,671,139	F348I	probably damaging	Het
Spef2	G	T	15: 9,607,377	R1319S	probably damaging	Het
Tas2r125	T	C	6: 132,910,176	F176L	probably benign	Het
Tcp10b	A	G	17: 13,081,626	K399E	possibly damaging	Het
Tcstv3	A	G	13: 120,317,724	H53R	probably damaging	Het
Tnrc6c	A	G	11: 117,723,005	K823R	probably damaging	Het
Trim31	A	G	17: 36,901,800	E221G	probably benign	Het
Trim47	T	A	11: 116,107,779	Q338L	probably damaging	Het
Tubgcp6	C	A	15: 89,116,241	R307L	possibly damaging	Het
Usp9y	A	G	Y: 1,303,371		probably null	Het
Utp20	G	T	10: 88,753,026	T2427K	probably benign	Het
Vldlr	T	C	19: 27,241,309	V147A	probably damaging	Het
Vmn1r115	C	T	7: 20,844,273	R238H	probably benign	Het
Vmn1r175	C	A	7: 23,808,793	R136S	probably benign	Het
Vmn1r53	A	G	6: 90,224,286	S19P	possibly damaging	Het
Vwa5b2	G	T	16: 20,604,832	S1165I	possibly damaging	Het
Zfp362	G	T	4: 128,790,276	P13T	probably damaging	Het
Zfp825	A	G	13: 74,480,945	C151R	probably damaging	Het

Other mutations in Ncor2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00330:Ncor2	APN	5	125042743	critical splice donor site	probably null
IGL00519:Ncor2	APN	5	125084924	missense	unknown
IGL00900:Ncor2	APN	5	125025784	missense	probably damaging	1.00
IGL00950:Ncor2	APN	5	125086890	missense	unknown
IGL01320:Ncor2	APN	5	125109927	missense	probably benign	0.00
IGL01382:Ncor2	APN	5	125055773	missense	probably damaging	0.96
IGL01573:Ncor2	APN	5	125085026	missense	unknown
IGL01721:Ncor2	APN	5	125050937	missense	probably damaging	1.00
IGL01875:Ncor2	APN	5	125065870	missense	unknown
IGL02090:Ncor2	APN	5	125034403	missense	probably damaging	0.99
IGL02192:Ncor2	APN	5	125024237	missense	probably damaging	1.00
IGL02396:Ncor2	APN	5	125037914	missense	probably damaging	1.00
IGL02934:Ncor2	APN	5	125025557	missense	probably benign	0.33
IGL02997:Ncor2	APN	5	125119570	intron	probably benign
R0019:Ncor2	UTSW	5	125119481	critical splice donor site	probably null
R0331:Ncor2	UTSW	5	125084917	missense	unknown
R0333:Ncor2	UTSW	5	125034344	splice site	probably benign
R0403:Ncor2	UTSW	5	125033337	missense	possibly damaging	0.73
R0557:Ncor2	UTSW	5	125106305	nonsense	probably null
R0562:Ncor2	UTSW	5	125085029	missense	unknown
R0671:Ncor2	UTSW	5	125049387	missense	probably benign	0.13
R0699:Ncor2	UTSW	5	125029112	unclassified	probably benign
R0865:Ncor2	UTSW	5	125038982	missense	probably benign	0.17
R1183:Ncor2	UTSW	5	125023521	missense	possibly damaging	0.65
R1325:Ncor2	UTSW	5	125118780	intron	probably benign
R1344:Ncor2	UTSW	5	125025446	missense	probably damaging	1.00
R1433:Ncor2	UTSW	5	125109975	intron	probably benign
R1481:Ncor2	UTSW	5	125027138	nonsense	probably null
R1539:Ncor2	UTSW	5	125109939	missense	probably benign	0.07
R1558:Ncor2	UTSW	5	125033546	missense	probably damaging	1.00
R1585:Ncor2	UTSW	5	125084998	missense	unknown
R1611:Ncor2	UTSW	5	125110020	intron	probably benign
R1764:Ncor2	UTSW	5	125028615	missense	possibly damaging	0.91
R1789:Ncor2	UTSW	5	125019890	missense	probably damaging	1.00
R1809:Ncor2	UTSW	5	125118793	intron	probably benign
R1946:Ncor2	UTSW	5	125034412	missense	probably damaging	1.00
R1970:Ncor2	UTSW	5	125038918	missense	probably damaging	0.99
R2048:Ncor2	UTSW	5	125084932	missense	unknown
R2137:Ncor2	UTSW	5	125030712	missense	probably damaging	1.00
R2270:Ncor2	UTSW	5	125037955	missense	probably benign	0.33
R2380:Ncor2	UTSW	5	125036080	missense	possibly damaging	0.89
R2570:Ncor2	UTSW	5	125028800	critical splice acceptor site	probably null
R2918:Ncor2	UTSW	5	125025760	missense	probably damaging	0.99
R2921:Ncor2	UTSW	5	125055791	missense	probably damaging	1.00
R2922:Ncor2	UTSW	5	125055791	missense	probably damaging	1.00
R2923:Ncor2	UTSW	5	125055791	missense	probably damaging	1.00
R3116:Ncor2	UTSW	5	125024166	missense	probably damaging	1.00
R3768:Ncor2	UTSW	5	125028687	missense	probably damaging	1.00
R3826:Ncor2	UTSW	5	125118692	intron	probably benign
R3829:Ncor2	UTSW	5	125118692	intron	probably benign
R3830:Ncor2	UTSW	5	125118692	intron	probably benign
R3951:Ncor2	UTSW	5	125032256	missense	possibly damaging	0.94
R4175:Ncor2	UTSW	5	125050956	missense	probably damaging	0.99
R4360:Ncor2	UTSW	5	125028972	missense	probably damaging	1.00
R4470:Ncor2	UTSW	5	125102641	critical splice donor site	probably null
R4490:Ncor2	UTSW	5	125036815	splice site	probably null
R4573:Ncor2	UTSW	5	125055825	missense	probably damaging	0.99
R4611:Ncor2	UTSW	5	125030859	missense	probably damaging	1.00
R4799:Ncor2	UTSW	5	125037060	critical splice donor site	probably null
R4851:Ncor2	UTSW	5	125033367	missense	possibly damaging	0.93
R4853:Ncor2	UTSW	5	125025105	missense	probably damaging	0.99
R4853:Ncor2	UTSW	5	125081183	missense	unknown
R4896:Ncor2	UTSW	5	125049340	critical splice donor site	probably null
R4997:Ncor2	UTSW	5	125034010	missense	probably damaging	0.99
R5057:Ncor2	UTSW	5	125048066	missense	possibly damaging	0.86
R5253:Ncor2	UTSW	5	125026930	missense	probably benign	0.44
R5461:Ncor2	UTSW	5	125027113	missense	probably damaging	1.00
R5585:Ncor2	UTSW	5	125067911	nonsense	probably null
R5638:Ncor2	UTSW	5	125048300	missense	probably benign	0.33
R5879:Ncor2	UTSW	5	125026775	unclassified	probably benign
R5967:Ncor2	UTSW	5	125068984	missense	unknown
R5999:Ncor2	UTSW	5	125033441	missense	probably damaging	1.00
R6020:Ncor2	UTSW	5	125020011	missense	probably benign	0.14
R6109:Ncor2	UTSW	5	125055846	missense	probably damaging	1.00
R6423:Ncor2	UTSW	5	125087902	missense	unknown
R6462:Ncor2	UTSW	5	125024172	missense	probably damaging	1.00
R6478:Ncor2	UTSW	5	125110005	intron	probably benign
R7074:Ncor2	UTSW	5	125049366	nonsense	probably null
R7179:Ncor2	UTSW	5	125055783	missense	unknown
R7261:Ncor2	UTSW	5	125110079	splice site	probably null
R7263:Ncor2	UTSW	5	125032132	missense
R7273:Ncor2	UTSW	5	125023623	missense
R7282:Ncor2	UTSW	5	125020040	missense
R7570:Ncor2	UTSW	5	125030089	missense
R7725:Ncor2	UTSW	5	125023566	missense
R7747:Ncor2	UTSW	5	125027038	missense
R7748:Ncor2	UTSW	5	125109967	missense	unknown
R7825:Ncor2	UTSW	5	125037077	missense	possibly damaging	0.53
Z1088:Ncor2	UTSW	5	125067788	missense	unknown
Z1088:Ncor2	UTSW	5	125086840	critical splice donor site	probably null

Predicted Primers

PCR Primer
(F):5'- AGAACCCTGATCTGACTCTTGG -3'
(R):5'- GCTAGAGAAGAGCCACTTGG -3'

Sequencing Primer
(F):5'- GATCTGACTCTTGGTCTCCTGG -3'
(R):5'- AGACTAAGGCACGGCTCC -3'

Posted On

2014-06-30