Mutagenetix > Incidental Mutation

Incidental Mutation 'R7634:Slc22a7'

589839

Institutional Source

Beutler Lab

Gene Symbol

Slc22a7

Ensembl Gene

ENSMUSG00000067144

Gene Name

solute carrier family 22 (organic anion transporter), member 7

Synonyms

OAT2, NLT

MMRRC Submission

045693-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.063) question?

Stock #

R7634 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

46743109-46749383 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 46749156 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Alanine to Threonine at position 54 (A54T)

Ref Sequence

ENSEMBL: ENSMUSP00000084234 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000047034] [ENSMUST00000087012] [ENSMUST00000166852]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000047034

SMART Domains

Protein: ENSMUSP00000044580
Gene: ENSMUSG00000015599

Domain	Start	End	E-Value	Type
Pfam:Pkinase_Tyr	34	293	3.4e-21	PFAM
Pfam:Pkinase	34	305	1.7e-33	PFAM
low complexity region	320	334	N/A	INTRINSIC
low complexity region	371	395	N/A	INTRINSIC
low complexity region	570	593	N/A	INTRINSIC
low complexity region	611	624	N/A	INTRINSIC
low complexity region	633	653	N/A	INTRINSIC
low complexity region	697	709	N/A	INTRINSIC
coiled coil region	729	776	N/A	INTRINSIC
low complexity region	779	797	N/A	INTRINSIC
low complexity region	893	913	N/A	INTRINSIC
low complexity region	945	962	N/A	INTRINSIC
low complexity region	1090	1115	N/A	INTRINSIC
low complexity region	1236	1251	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000087012
AA Change: A54T

PolyPhen 2 Score 0.021 (Sensitivity: 0.95; Specificity: 0.80)

SMART Domains

Protein: ENSMUSP00000084234
Gene: ENSMUSG00000067144
AA Change: A54T

Domain	Start	End	E-Value	Type
transmembrane domain	21	43	N/A	INTRINSIC
Pfam:MFS_1	82	479	1.2e-32	PFAM
Pfam:Sugar_tr	86	524	2.5e-36	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000166852

SMART Domains

Protein: ENSMUSP00000127966
Gene: ENSMUSG00000091742

Domain	Start	End	E-Value	Type
Pfam:Ribosomal_L5	10	59	4.1e-18	PFAM
Pfam:Ribosomal_L5_C	63	161	8.7e-25	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.2%

Validation Efficiency

100% (58/58)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is involved in the sodium-independent transport and excretion of organic anions, some of which are potentially toxic. The encoded protein is an integral membrane protein and appears to be localized to the basolateral membrane of the kidney. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 58 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aadat	A	T	8: 60,969,102 (GRCm39)	M116L	probably benign	Het
Adam25	A	G	8: 41,207,883 (GRCm39)	D383G	probably benign	Het
Adam26b	T	A	8: 43,974,034 (GRCm39)	M323L	probably benign	Het
Adgrf3	T	C	5: 30,407,245 (GRCm39)	H227R	probably benign	Het
Antxr1	G	A	6: 87,114,273 (GRCm39)	T498I	probably benign	Het
Arg1	T	A	10: 24,791,627 (GRCm39)	T285S	possibly damaging	Het
Arhgdig	T	C	17: 26,418,365 (GRCm39)	D206G	probably damaging	Het
Asb10	C	A	5: 24,745,875 (GRCm39)	C17F	possibly damaging	Het
Atg2b	T	C	12: 105,618,379 (GRCm39)	D891G	probably damaging	Het
Cacna1h	A	T	17: 25,611,083 (GRCm39)	S572T	possibly damaging	Het
Cenpj	T	C	14: 56,780,257 (GRCm39)	T985A	probably benign	Het
Cfap65	G	T	1: 74,941,593 (GRCm39)	N1780K	probably damaging	Het
Cyp26c1	T	C	19: 37,681,447 (GRCm39)	Y417H	probably damaging	Het
Dnajb13	G	T	7: 100,152,393 (GRCm39)	Q308K	probably benign	Het
Fam107b	T	C	2: 3,771,777 (GRCm39)	S3P	possibly damaging	Het
Gm3127	A	G	14: 15,425,787 (GRCm39)	N64S	probably damaging	Het
Gm4847	A	C	1: 166,460,249 (GRCm39)	N412K	probably benign	Het
Gtf3c3	A	T	1: 54,458,800 (GRCm39)		probably null	Het
Guf1	T	C	5: 69,721,887 (GRCm39)	S349P	probably damaging	Het
Hvcn1	A	G	5: 122,371,586 (GRCm39)	Y42C	probably damaging	Het
Insm1	A	G	2: 146,065,027 (GRCm39)	Y281C	probably damaging	Het
Lrrc71	A	G	3: 87,650,281 (GRCm39)	I264T	probably damaging	Het
Lrriq1	T	C	10: 103,036,462 (GRCm39)	N897S	probably damaging	Het
Mtmr6	T	A	14: 60,533,596 (GRCm39)	F375I	probably damaging	Het
Mtor	G	C	4: 148,536,807 (GRCm39)	S27T	possibly damaging	Het
Mylk4	T	A	13: 32,892,891 (GRCm39)	K387N	possibly damaging	Het
Nadk2	T	G	15: 9,092,935 (GRCm39)	D247E	probably benign	Het
Nfya	T	C	17: 48,699,445 (GRCm39)	T213A	probably damaging	Het
Nlrp1a	A	G	11: 70,990,354 (GRCm39)	V1067A	probably benign	Het
Nrbp2	C	T	15: 75,959,257 (GRCm39)	R206Q	possibly damaging	Het
Oas2	A	G	5: 120,871,293 (GRCm39)	V722A	probably benign	Het
Odad4	G	A	11: 100,452,731 (GRCm39)		probably null	Het
Or4c108	G	T	2: 88,804,001 (GRCm39)	P78Q	probably damaging	Het
Pcdhb2	G	T	18: 37,428,000 (GRCm39)		probably benign	Het
Pdpr	T	A	8: 111,852,317 (GRCm39)	H561Q	probably damaging	Het
Plcz1	A	G	6: 139,961,853 (GRCm39)	F233L	probably damaging	Het
Ppp1r3d	A	G	2: 178,055,165 (GRCm39)	I279T	probably damaging	Het
Psg17	A	G	7: 18,548,416 (GRCm39)	Y452H	probably damaging	Het
Reg4	T	C	3: 98,140,428 (GRCm39)		probably null	Het
Rint1	A	G	5: 24,010,477 (GRCm39)	T229A	probably benign	Het
Robo1	T	G	16: 72,839,866 (GRCm39)		probably null	Het
Slc22a26	A	C	19: 7,779,952 (GRCm39)		probably null	Het
Slc52a3	C	A	2: 151,846,534 (GRCm39)	T165N	possibly damaging	Het
Slc7a11	C	T	3: 50,378,486 (GRCm39)		probably null	Het
Smap2	T	C	4: 120,873,996 (GRCm39)	N18S	probably benign	Het
Spag6l	T	C	16: 16,595,278 (GRCm39)	E369G	probably damaging	Het
Tars3	T	A	7: 65,325,760 (GRCm39)	Y445N	probably damaging	Het
Tmem161b	C	A	13: 84,370,537 (GRCm39)		probably benign	Het
Tmprss7	C	T	16: 45,483,637 (GRCm39)	G579D	probably benign	Het
Tpi1	T	A	6: 124,789,817 (GRCm39)	K109*	probably null	Het
Ttn	T	C	2: 76,628,856 (GRCm39)	E14466G	possibly damaging	Het
Usp40	A	T	1: 87,890,152 (GRCm39)	C903*	probably null	Het
Vinac1	T	A	2: 128,880,192 (GRCm39)	D578V		Het
Vmn2r104	T	A	17: 20,261,971 (GRCm39)	L386F	possibly damaging	Het
Vmn2r54	G	A	7: 12,349,630 (GRCm39)	P651S	probably damaging	Het
Wnk4	C	A	11: 101,153,721 (GRCm39)	T261K	probably damaging	Het
Wnt2b	T	C	3: 104,854,432 (GRCm39)	Y342C	probably damaging	Het
Zbtb8b	A	G	4: 129,326,755 (GRCm39)	Y137H	probably damaging	Het

Other mutations in Slc22a7

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01638:Slc22a7	APN	17	46,748,920 (GRCm39)	splice site	probably null
R0755:Slc22a7	UTSW	17	46,749,113 (GRCm39)	missense	possibly damaging	0.93
R0898:Slc22a7	UTSW	17	46,744,075 (GRCm39)	missense	probably damaging	1.00
R1594:Slc22a7	UTSW	17	46,748,957 (GRCm39)	missense	possibly damaging	0.94
R1794:Slc22a7	UTSW	17	46,744,079 (GRCm39)	missense	probably damaging	1.00
R1900:Slc22a7	UTSW	17	46,749,157 (GRCm39)	missense	probably benign	0.00
R1973:Slc22a7	UTSW	17	46,748,016 (GRCm39)	missense	probably damaging	1.00
R2117:Slc22a7	UTSW	17	46,744,898 (GRCm39)	missense	possibly damaging	0.55
R4467:Slc22a7	UTSW	17	46,743,436 (GRCm39)	missense	probably benign
R4739:Slc22a7	UTSW	17	46,745,923 (GRCm39)	missense	probably damaging	1.00
R4921:Slc22a7	UTSW	17	46,747,859 (GRCm39)	missense	probably benign	0.00
R6982:Slc22a7	UTSW	17	46,745,563 (GRCm39)	missense	probably benign	0.02
R7122:Slc22a7	UTSW	17	46,749,224 (GRCm39)	missense	probably damaging	1.00
R7412:Slc22a7	UTSW	17	46,745,553 (GRCm39)	missense	probably benign	0.00
R8112:Slc22a7	UTSW	17	46,747,756 (GRCm39)	missense	probably benign	0.00
R8703:Slc22a7	UTSW	17	46,744,951 (GRCm39)	missense	probably damaging	0.98
R9117:Slc22a7	UTSW	17	46,748,029 (GRCm39)	missense	probably damaging	1.00
R9541:Slc22a7	UTSW	17	46,749,084 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AATTCTGAGCGGTCGTACTCC -3'
(R):5'- CTAGGTACTATAGAGGCACACCTG -3'

Sequencing Primer
(F):5'- GTCGTACTCCCAGCCCTG -3'
(R):5'- CCTGGTGGGTGGAGGGC -3'

Posted On

2019-10-24