Incidental Mutation 'R7782:Crocc'
ID |
599286 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Crocc
|
Ensembl Gene |
ENSMUSG00000040860 |
Gene Name |
ciliary rootlet coiled-coil, rootletin |
Synonyms |
|
MMRRC Submission |
045838-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.174)
|
Stock # |
R7782 (G1)
|
Quality Score |
216.009 |
Status
|
Not validated
|
Chromosome |
4 |
Chromosomal Location |
140743948-140787861 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to T
at 140752597 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Alanine to Threonine
at position 1432
(A1432T)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000099549
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000040222]
[ENSMUST00000097816]
[ENSMUST00000102491]
[ENSMUST00000168157]
|
AlphaFold |
Q8CJ40 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000040222
AA Change: A1268T
PolyPhen 2
Score 0.183 (Sensitivity: 0.92; Specificity: 0.87)
|
SMART Domains |
Protein: ENSMUSP00000037679 Gene: ENSMUSG00000040860 AA Change: A1268T
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000097816
AA Change: A1268T
PolyPhen 2
Score 0.183 (Sensitivity: 0.92; Specificity: 0.87)
|
SMART Domains |
Protein: ENSMUSP00000095425 Gene: ENSMUSG00000040860 AA Change: A1268T
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000102491
AA Change: A1432T
PolyPhen 2
Score 0.052 (Sensitivity: 0.94; Specificity: 0.83)
|
SMART Domains |
Protein: ENSMUSP00000099549 Gene: ENSMUSG00000040860 AA Change: A1432T
Domain | Start | End | E-Value | Type |
low complexity region
|
2 |
15 |
N/A |
INTRINSIC |
low complexity region
|
77 |
93 |
N/A |
INTRINSIC |
Pfam:Rootletin
|
158 |
336 |
9.7e-65 |
PFAM |
low complexity region
|
354 |
381 |
N/A |
INTRINSIC |
internal_repeat_2
|
462 |
479 |
1.77e-6 |
PROSPERO |
low complexity region
|
493 |
514 |
N/A |
INTRINSIC |
internal_repeat_3
|
527 |
557 |
8.63e-6 |
PROSPERO |
internal_repeat_6
|
533 |
556 |
4.21e-5 |
PROSPERO |
low complexity region
|
561 |
575 |
N/A |
INTRINSIC |
low complexity region
|
576 |
594 |
N/A |
INTRINSIC |
low complexity region
|
617 |
638 |
N/A |
INTRINSIC |
low complexity region
|
788 |
807 |
N/A |
INTRINSIC |
low complexity region
|
863 |
880 |
N/A |
INTRINSIC |
low complexity region
|
1009 |
1039 |
N/A |
INTRINSIC |
internal_repeat_4
|
1050 |
1068 |
4.21e-5 |
PROSPERO |
internal_repeat_7
|
1057 |
1070 |
9.31e-5 |
PROSPERO |
internal_repeat_2
|
1057 |
1074 |
1.77e-6 |
PROSPERO |
internal_repeat_4
|
1061 |
1078 |
4.21e-5 |
PROSPERO |
internal_repeat_1
|
1076 |
1101 |
3.36e-8 |
PROSPERO |
internal_repeat_7
|
1192 |
1205 |
9.31e-5 |
PROSPERO |
low complexity region
|
1271 |
1288 |
N/A |
INTRINSIC |
internal_repeat_5
|
1302 |
1328 |
4.21e-5 |
PROSPERO |
low complexity region
|
1354 |
1365 |
N/A |
INTRINSIC |
low complexity region
|
1417 |
1433 |
N/A |
INTRINSIC |
low complexity region
|
1434 |
1453 |
N/A |
INTRINSIC |
low complexity region
|
1461 |
1473 |
N/A |
INTRINSIC |
internal_repeat_6
|
1697 |
1720 |
4.21e-5 |
PROSPERO |
low complexity region
|
1723 |
1740 |
N/A |
INTRINSIC |
coiled coil region
|
1744 |
1871 |
N/A |
INTRINSIC |
coiled coil region
|
1892 |
1996 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000168157
AA Change: A1268T
PolyPhen 2
Score 0.183 (Sensitivity: 0.92; Specificity: 0.87)
|
SMART Domains |
Protein: ENSMUSP00000126543 Gene: ENSMUSG00000040860 AA Change: A1268T
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.8%
- 20x: 99.4%
|
Validation Efficiency |
100% (80/80) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null mutation show no apparent functional deficits in phototransduction and ciliary beating in sensory and motile cilia. However, photoreceptors degenerate over time, and lungs appear prone to pathological changes. [provided by MGI curators]
|
Allele List at MGI |
All alleles(4) : Targeted, knock-out(1) Gene trapped(3) |
Other mutations in this stock |
Total: 81 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4933415A04Rik |
GTGTGTGTATGTGTGT |
GTGTGTGT |
11: 43,478,239 (GRCm39) |
|
probably null |
Het |
Adamts16 |
A |
G |
13: 70,984,265 (GRCm39) |
S133P |
probably damaging |
Het |
Adamts17 |
T |
C |
7: 66,774,802 (GRCm39) |
W1001R |
probably damaging |
Het |
Aox4 |
T |
A |
1: 58,270,251 (GRCm39) |
|
probably null |
Het |
B4galnt4 |
C |
T |
7: 140,644,988 (GRCm39) |
P221S |
probably damaging |
Het |
BC005537 |
C |
T |
13: 24,987,382 (GRCm39) |
R7W |
possibly damaging |
Het |
BC034090 |
T |
C |
1: 155,108,410 (GRCm39) |
|
probably benign |
Het |
Best2 |
T |
A |
8: 85,736,143 (GRCm39) |
D312V |
probably damaging |
Het |
Bod1l |
A |
T |
5: 41,975,286 (GRCm39) |
D2009E |
probably benign |
Het |
Ccdc158 |
A |
C |
5: 92,793,373 (GRCm39) |
S672A |
probably benign |
Het |
Ccdc43 |
A |
T |
11: 102,588,443 (GRCm39) |
L31Q |
probably damaging |
Het |
Cdcp3 |
G |
A |
7: 130,904,466 (GRCm39) |
|
probably null |
Het |
Chaf1a |
T |
G |
17: 56,369,291 (GRCm39) |
H507Q |
probably benign |
Het |
Clptm1l |
A |
G |
13: 73,752,439 (GRCm39) |
Y28C |
probably damaging |
Het |
Cp |
G |
A |
3: 20,029,223 (GRCm39) |
|
probably null |
Het |
Crybg2 |
A |
G |
4: 133,801,137 (GRCm39) |
T457A |
probably benign |
Het |
Csnk2a1-ps3 |
C |
T |
1: 156,352,552 (GRCm39) |
T251I |
probably damaging |
Het |
Dennd4a |
A |
G |
9: 64,814,202 (GRCm39) |
D1473G |
probably damaging |
Het |
Diaph3 |
A |
G |
14: 87,274,940 (GRCm39) |
F172S |
probably benign |
Het |
Dnajc5b |
A |
G |
3: 19,629,006 (GRCm39) |
N100S |
probably benign |
Het |
Dusp13b |
G |
A |
14: 21,791,404 (GRCm39) |
T16I |
possibly damaging |
Het |
Epb42 |
T |
G |
2: 120,864,916 (GRCm39) |
K58N |
probably benign |
Het |
Fat1 |
A |
G |
8: 45,403,948 (GRCm39) |
Y233C |
probably damaging |
Het |
Fcgbp |
T |
A |
7: 27,784,460 (GRCm39) |
Y173* |
probably null |
Het |
Fign |
T |
A |
2: 63,809,506 (GRCm39) |
D588V |
probably damaging |
Het |
Fignl2 |
C |
T |
15: 100,951,188 (GRCm39) |
V365M |
unknown |
Het |
Fnip2 |
A |
C |
3: 79,415,430 (GRCm39) |
Y203D |
probably benign |
Het |
Ftsj3 |
CCTTCTTCTTCTTCTTCT |
CCTTCTTCTTCTTCT |
11: 106,143,377 (GRCm39) |
|
probably benign |
Het |
Gfral |
C |
A |
9: 76,100,572 (GRCm39) |
V289L |
probably benign |
Het |
H2bc21 |
T |
A |
3: 96,128,487 (GRCm39) |
|
probably null |
Het |
Heatr5b |
G |
T |
17: 79,103,370 (GRCm39) |
T1161K |
probably damaging |
Het |
Hectd4 |
A |
T |
5: 121,443,784 (GRCm39) |
I1335F |
possibly damaging |
Het |
Htt |
T |
A |
5: 35,040,336 (GRCm39) |
V2166D |
probably benign |
Het |
Ipo5 |
G |
C |
14: 121,170,537 (GRCm39) |
K436N |
possibly damaging |
Het |
Iqca1l |
A |
G |
5: 24,749,224 (GRCm39) |
L758P |
probably damaging |
Het |
Itga6 |
A |
G |
2: 71,671,879 (GRCm39) |
E794G |
probably damaging |
Het |
Itga9 |
G |
A |
9: 118,672,712 (GRCm39) |
C148Y |
|
Het |
Kcnip2 |
A |
C |
19: 45,785,524 (GRCm39) |
|
probably null |
Het |
Kcnk6 |
T |
C |
7: 28,925,269 (GRCm39) |
T116A |
possibly damaging |
Het |
Kctd21 |
A |
G |
7: 96,997,297 (GRCm39) |
I257V |
probably benign |
Het |
Kif19a |
G |
A |
11: 114,672,748 (GRCm39) |
R299Q |
probably damaging |
Het |
Kifc2 |
G |
A |
15: 76,548,328 (GRCm39) |
G391R |
probably benign |
Het |
Klrg2 |
A |
G |
6: 38,604,562 (GRCm39) |
V381A |
possibly damaging |
Het |
Mob1b |
A |
G |
5: 88,897,542 (GRCm39) |
|
probably null |
Het |
Or13p8 |
T |
C |
4: 118,584,106 (GRCm39) |
Y221H |
probably damaging |
Het |
Or6c69 |
T |
G |
10: 129,747,392 (GRCm39) |
S252R |
probably damaging |
Het |
Or6c75 |
T |
C |
10: 129,337,020 (GRCm39) |
V81A |
probably benign |
Het |
Or7c70 |
T |
C |
10: 78,683,447 (GRCm39) |
I101V |
probably benign |
Het |
Oxsm |
C |
A |
14: 16,240,925 (GRCm38) |
A375S |
possibly damaging |
Het |
Pcdha3 |
T |
C |
18: 37,081,193 (GRCm39) |
V645A |
probably damaging |
Het |
Pcdhb15 |
T |
A |
18: 37,607,788 (GRCm39) |
V340E |
possibly damaging |
Het |
Pced1a |
G |
A |
2: 130,264,435 (GRCm39) |
P132S |
probably damaging |
Het |
Pla2r1 |
C |
T |
2: 60,334,531 (GRCm39) |
V414M |
probably benign |
Het |
Plekhg4 |
A |
C |
8: 106,104,399 (GRCm39) |
I493L |
probably benign |
Het |
Plekhj1 |
T |
A |
10: 80,634,179 (GRCm39) |
|
probably benign |
Het |
Pmfbp1 |
G |
T |
8: 110,254,412 (GRCm39) |
K482N |
probably damaging |
Het |
Ppil3 |
T |
C |
1: 58,473,574 (GRCm39) |
N92S |
probably benign |
Het |
Ppt2 |
A |
G |
17: 34,844,686 (GRCm39) |
S156P |
probably benign |
Het |
Prss41 |
A |
T |
17: 24,056,087 (GRCm39) |
D255E |
probably benign |
Het |
Psg25 |
T |
A |
7: 18,255,227 (GRCm39) |
M430L |
probably benign |
Het |
Rffl |
A |
T |
11: 82,703,595 (GRCm39) |
C109* |
probably null |
Het |
Rock2 |
A |
G |
12: 17,021,111 (GRCm39) |
E991G |
probably benign |
Het |
Rpap2 |
A |
G |
5: 107,768,058 (GRCm39) |
I299V |
probably benign |
Het |
Rras |
T |
C |
7: 44,670,529 (GRCm39) |
S158P |
probably benign |
Het |
Serpinb10 |
G |
A |
1: 107,463,196 (GRCm39) |
|
probably benign |
Het |
Smyd3 |
A |
T |
1: 178,799,859 (GRCm39) |
I360N |
possibly damaging |
Het |
Synm |
A |
G |
7: 67,384,714 (GRCm39) |
S541P |
probably damaging |
Het |
Tasor |
A |
G |
14: 27,193,901 (GRCm39) |
T1034A |
probably benign |
Het |
Tbc1d31 |
C |
A |
15: 57,821,764 (GRCm39) |
T813K |
possibly damaging |
Het |
Trav7n-4 |
A |
G |
14: 53,329,103 (GRCm39) |
M38V |
probably benign |
Het |
Tulp3 |
A |
C |
6: 128,301,943 (GRCm39) |
N359K |
possibly damaging |
Het |
Twf1 |
T |
C |
15: 94,480,654 (GRCm39) |
K196E |
probably benign |
Het |
Usp24 |
A |
T |
4: 106,173,771 (GRCm39) |
N35Y |
probably damaging |
Het |
Usp46 |
T |
A |
5: 74,162,772 (GRCm39) |
E342D |
probably benign |
Het |
Vps50 |
T |
A |
6: 3,532,202 (GRCm39) |
|
probably null |
Het |
Vps8 |
T |
A |
16: 21,330,308 (GRCm39) |
I727N |
possibly damaging |
Het |
Wdr90 |
C |
T |
17: 26,065,300 (GRCm39) |
R1652Q |
probably damaging |
Het |
Zfp11 |
A |
T |
5: 129,734,027 (GRCm39) |
V478E |
possibly damaging |
Het |
Zfp493 |
A |
G |
13: 67,935,123 (GRCm39) |
K359E |
probably benign |
Het |
Zfp536 |
T |
C |
7: 37,268,126 (GRCm39) |
Y430C |
probably damaging |
Het |
Zfpm1 |
A |
G |
8: 123,063,689 (GRCm39) |
D916G |
unknown |
Het |
|
Other mutations in Crocc |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01389:Crocc
|
APN |
4 |
140,749,423 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01474:Crocc
|
APN |
4 |
140,762,703 (GRCm39) |
splice site |
probably benign |
|
IGL01859:Crocc
|
APN |
4 |
140,756,601 (GRCm39) |
missense |
probably benign |
0.07 |
IGL02161:Crocc
|
APN |
4 |
140,761,302 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02244:Crocc
|
APN |
4 |
140,765,231 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02970:Crocc
|
APN |
4 |
140,757,557 (GRCm39) |
missense |
possibly damaging |
0.49 |
N/A:Crocc
|
UTSW |
4 |
140,749,057 (GRCm39) |
missense |
probably damaging |
1.00 |
R0158:Crocc
|
UTSW |
4 |
140,769,553 (GRCm39) |
splice site |
probably benign |
|
R0280:Crocc
|
UTSW |
4 |
140,755,737 (GRCm39) |
missense |
probably damaging |
1.00 |
R0448:Crocc
|
UTSW |
4 |
140,769,502 (GRCm39) |
missense |
probably damaging |
1.00 |
R0532:Crocc
|
UTSW |
4 |
140,757,558 (GRCm39) |
missense |
possibly damaging |
0.95 |
R0597:Crocc
|
UTSW |
4 |
140,744,382 (GRCm39) |
missense |
probably benign |
|
R0597:Crocc
|
UTSW |
4 |
140,747,224 (GRCm39) |
missense |
probably benign |
0.06 |
R0761:Crocc
|
UTSW |
4 |
140,774,387 (GRCm39) |
missense |
probably benign |
0.01 |
R0761:Crocc
|
UTSW |
4 |
140,757,087 (GRCm39) |
missense |
probably benign |
0.00 |
R1238:Crocc
|
UTSW |
4 |
140,762,675 (GRCm39) |
missense |
probably benign |
0.00 |
R1460:Crocc
|
UTSW |
4 |
140,756,551 (GRCm39) |
nonsense |
probably null |
|
R1515:Crocc
|
UTSW |
4 |
140,747,048 (GRCm39) |
missense |
probably benign |
0.00 |
R1557:Crocc
|
UTSW |
4 |
140,752,776 (GRCm39) |
missense |
probably damaging |
0.96 |
R1561:Crocc
|
UTSW |
4 |
140,757,579 (GRCm39) |
missense |
probably damaging |
1.00 |
R1641:Crocc
|
UTSW |
4 |
140,744,388 (GRCm39) |
missense |
probably benign |
0.00 |
R1709:Crocc
|
UTSW |
4 |
140,753,410 (GRCm39) |
critical splice donor site |
probably null |
|
R1785:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
R1786:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
R1793:Crocc
|
UTSW |
4 |
140,746,620 (GRCm39) |
missense |
probably damaging |
1.00 |
R1897:Crocc
|
UTSW |
4 |
140,746,047 (GRCm39) |
missense |
probably damaging |
1.00 |
R1935:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
R2037:Crocc
|
UTSW |
4 |
140,774,253 (GRCm39) |
critical splice donor site |
probably null |
|
R2127:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R2129:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R2130:Crocc
|
UTSW |
4 |
140,756,413 (GRCm39) |
missense |
probably benign |
0.04 |
R2136:Crocc
|
UTSW |
4 |
140,760,265 (GRCm39) |
missense |
probably damaging |
1.00 |
R2298:Crocc
|
UTSW |
4 |
140,752,770 (GRCm39) |
missense |
probably benign |
0.30 |
R2847:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
R2848:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
R2913:Crocc
|
UTSW |
4 |
140,747,661 (GRCm39) |
missense |
probably damaging |
1.00 |
R3415:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R3416:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R3417:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R4082:Crocc
|
UTSW |
4 |
140,761,282 (GRCm39) |
splice site |
probably null |
|
R4454:Crocc
|
UTSW |
4 |
140,747,716 (GRCm39) |
missense |
possibly damaging |
0.52 |
R4591:Crocc
|
UTSW |
4 |
140,745,983 (GRCm39) |
missense |
probably damaging |
1.00 |
R4597:Crocc
|
UTSW |
4 |
140,747,088 (GRCm39) |
missense |
probably damaging |
1.00 |
R4984:Crocc
|
UTSW |
4 |
140,761,763 (GRCm39) |
missense |
probably damaging |
1.00 |
R4992:Crocc
|
UTSW |
4 |
140,773,977 (GRCm39) |
missense |
probably damaging |
0.98 |
R5109:Crocc
|
UTSW |
4 |
140,755,722 (GRCm39) |
missense |
probably damaging |
1.00 |
R5143:Crocc
|
UTSW |
4 |
140,768,350 (GRCm39) |
missense |
probably benign |
0.01 |
R5381:Crocc
|
UTSW |
4 |
140,756,622 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5684:Crocc
|
UTSW |
4 |
140,778,455 (GRCm39) |
missense |
probably damaging |
0.99 |
R5757:Crocc
|
UTSW |
4 |
140,770,875 (GRCm39) |
missense |
probably damaging |
1.00 |
R5795:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5796:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5798:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5815:Crocc
|
UTSW |
4 |
140,762,507 (GRCm39) |
missense |
probably damaging |
0.99 |
R5955:Crocc
|
UTSW |
4 |
140,745,229 (GRCm39) |
missense |
possibly damaging |
0.75 |
R6031:Crocc
|
UTSW |
4 |
140,761,668 (GRCm39) |
critical splice donor site |
probably null |
|
R6063:Crocc
|
UTSW |
4 |
140,773,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R6063:Crocc
|
UTSW |
4 |
140,769,032 (GRCm39) |
missense |
probably benign |
0.08 |
R7086:Crocc
|
UTSW |
4 |
140,774,368 (GRCm39) |
missense |
possibly damaging |
0.47 |
R7282:Crocc
|
UTSW |
4 |
140,749,652 (GRCm39) |
missense |
probably damaging |
1.00 |
R7293:Crocc
|
UTSW |
4 |
140,770,867 (GRCm39) |
missense |
probably benign |
0.17 |
R7404:Crocc
|
UTSW |
4 |
140,753,497 (GRCm39) |
missense |
possibly damaging |
0.46 |
R7571:Crocc
|
UTSW |
4 |
140,773,360 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7646:Crocc
|
UTSW |
4 |
140,748,966 (GRCm39) |
missense |
probably null |
0.94 |
R8053:Crocc
|
UTSW |
4 |
140,770,230 (GRCm39) |
critical splice donor site |
probably null |
|
R8762:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
R9021:Crocc
|
UTSW |
4 |
140,749,674 (GRCm39) |
missense |
probably benign |
0.00 |
R9188:Crocc
|
UTSW |
4 |
140,747,151 (GRCm39) |
missense |
probably benign |
0.04 |
R9272:Crocc
|
UTSW |
4 |
140,747,132 (GRCm39) |
missense |
probably benign |
0.00 |
R9411:Crocc
|
UTSW |
4 |
140,749,577 (GRCm39) |
critical splice donor site |
probably null |
|
R9647:Crocc
|
UTSW |
4 |
140,774,335 (GRCm39) |
missense |
probably benign |
0.00 |
R9667:Crocc
|
UTSW |
4 |
140,748,988 (GRCm39) |
missense |
probably damaging |
1.00 |
R9706:Crocc
|
UTSW |
4 |
140,746,046 (GRCm39) |
missense |
possibly damaging |
0.76 |
R9780:Crocc
|
UTSW |
4 |
140,756,556 (GRCm39) |
missense |
probably benign |
0.01 |
X0065:Crocc
|
UTSW |
4 |
140,769,103 (GRCm39) |
missense |
possibly damaging |
0.57 |
|
Predicted Primers |
PCR Primer
(F):5'- AAGGCTAAGCTGGAGTCCCATC -3'
(R):5'- AAGACACTAGTGGTTGGGACC -3'
Sequencing Primer
(F):5'- GACTCAGGGACTCACCT -3'
(R):5'- AGCAAGAGGCCGAGTTCC -3'
|
Posted On |
2019-11-26 |