Mutagenetix > Incidental Mutation

Incidental Mutation 'R8415:Mettl25'

652903

Institutional Source

Beutler Lab

Gene Symbol

Mettl25

Ensembl Gene

ENSMUSG00000036009

Gene Name

methyltransferase like 25

Synonyms

BC067068

MMRRC Submission

067769-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.114) question?

Stock #

R8415 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

105599050-105677241 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 105662002 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Lysine at position 323 (Q323K)

Ref Sequence

ENSEMBL: ENSMUSP00000038665 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000046638] [ENSMUST00000176040] [ENSMUST00000176924]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000046638
AA Change: Q323K

PolyPhen 2 Score 0.045 (Sensitivity: 0.94; Specificity: 0.83)

SMART Domains

Protein: ENSMUSP00000038665
Gene: ENSMUSG00000036009
AA Change: Q323K

Domain	Start	End	E-Value	Type
Pfam:Methyltransf_32	149	413	1.9e-30	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000176040

Predicted Effect

probably benign
Transcript: ENSMUST00000176924

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.0%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 60 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ankrd24	A	G	10: 81,475,947 (GRCm39)	H317R	unknown	Het
Aox1	A	T	1: 58,080,638 (GRCm39)	Y29F	probably damaging	Het
Bnip2	T	C	9: 69,910,967 (GRCm39)	F304S	possibly damaging	Het
Bsn	G	A	9: 107,988,651 (GRCm39)	A2367V	probably benign	Het
Ccdc18	T	A	5: 108,363,899 (GRCm39)	V1198E	probably damaging	Het
Cnot3	T	C	7: 3,661,687 (GRCm39)	F660L	probably benign	Het
Cntnap3	A	G	13: 64,886,479 (GRCm39)	I1249T	probably benign	Het
Ctnna3	A	G	10: 63,339,909 (GRCm39)	I32V	probably benign	Het
Dgkz	A	T	2: 91,770,649 (GRCm39)	S485T	possibly damaging	Het
Dnaaf6rt	A	G	1: 31,262,564 (GRCm39)	N182S	probably benign	Het
Dpagt1	C	A	9: 44,238,482 (GRCm39)	N49K	possibly damaging	Het
Dsg3	A	T	18: 20,656,765 (GRCm39)	S212C	probably damaging	Het
Epb41l1	C	T	2: 156,368,873 (GRCm39)	A714V	probably benign	Het
Eppk1	A	G	15: 75,995,831 (GRCm39)	V350A	probably benign	Het
Frem1	T	G	4: 82,918,499 (GRCm39)	D481A	probably damaging	Het
Git2	T	C	5: 114,871,989 (GRCm39)	K532E	possibly damaging	Het
Glyr1	T	C	16: 4,854,329 (GRCm39)	H102R	probably benign	Het
Hdgfl2	C	T	17: 56,400,712 (GRCm39)	P160L	probably benign	Het
Hivep1	T	C	13: 42,308,905 (GRCm39)	S382P	probably benign	Het
Hmcn2	C	A	2: 31,281,088 (GRCm39)	L1867I	probably benign	Het
Hydin	G	A	8: 111,178,626 (GRCm39)	G1074R	probably damaging	Het
Ift140	A	G	17: 25,311,889 (GRCm39)	I1271V	probably damaging	Het
Krt28	T	A	11: 99,265,626 (GRCm39)	I14L	probably benign	Het
Lrtm2	A	T	6: 119,294,458 (GRCm39)	D224E	probably damaging	Het
Map1s	G	A	8: 71,365,910 (GRCm39)	V272M	probably damaging	Het
Mast3	A	G	8: 71,233,866 (GRCm39)	Y960H	probably damaging	Het
Mlh3	A	T	12: 85,315,854 (GRCm39)	S111T	probably benign	Het
Muc17	A	G	5: 137,172,798 (GRCm39)	L85P		Het
Myh6	C	G	14: 55,181,835 (GRCm39)	R1822P	probably damaging	Het
Myof	C	T	19: 37,983,872 (GRCm39)	G144E	probably benign	Het
Nat8f2	A	G	6: 85,845,024 (GRCm39)	S113P	probably damaging	Het
Nlrp9a	A	T	7: 26,256,925 (GRCm39)	Y181F	probably benign	Het
Nup85	A	G	11: 115,457,468 (GRCm39)	I57V	probably benign	Het
Or4c99	T	A	2: 88,329,710 (GRCm39)	C94S	probably damaging	Het
Or5p79	C	T	7: 108,221,163 (GRCm39)	T48I	probably damaging	Het
Or7e170	T	A	9: 19,795,409 (GRCm39)	Y64F	possibly damaging	Het
Pcdhb2	A	G	18: 37,429,110 (GRCm39)	N361S	probably damaging	Het
Peg10	T	TCCA	6: 4,756,451 (GRCm39)		probably benign	Het
Phf20	C	T	2: 156,129,913 (GRCm39)	T495M	probably benign	Het
Pitpnm1	T	C	19: 4,155,454 (GRCm39)	M368T	probably benign	Het
Pter	A	G	2: 13,005,700 (GRCm39)	D291G	probably damaging	Het
Rasgrp2	T	G	19: 6,454,781 (GRCm39)	V207G	probably damaging	Het
Rnd2	A	T	11: 101,362,011 (GRCm39)	Q188L	probably benign	Het
Sh3d19	T	A	3: 85,992,363 (GRCm39)	D130E	probably benign	Het
Slc7a2	A	T	8: 41,369,396 (GRCm39)	Y617F	probably damaging	Het
Snx29	T	C	16: 11,265,291 (GRCm39)	L165P	probably damaging	Het
St7	T	C	6: 17,848,080 (GRCm39)		probably null	Het
Tas2r115	A	G	6: 132,714,798 (GRCm39)	L51P	probably damaging	Het
Tead1	C	A	7: 112,456,135 (GRCm39)	P164Q	probably benign	Het
Thop1	A	G	10: 80,914,385 (GRCm39)	Y224C	probably damaging	Het
Twf1	T	C	15: 94,477,702 (GRCm39)	*351W	probably null	Het
Uck1	C	A	2: 32,150,153 (GRCm39)		probably benign	Het
Utp20	A	G	10: 88,662,466 (GRCm39)		probably null	Het
Vmn2r118	G	T	17: 55,915,057 (GRCm39)	L530I	probably benign	Het
Vmn2r30	A	T	7: 7,315,359 (GRCm39)	C825S	probably damaging	Het
Vps13d	A	T	4: 144,818,549 (GRCm39)	M3106K		Het
Wfdc15a	A	T	2: 164,041,671 (GRCm39)	C51S	probably damaging	Het
Zc3hc1	T	C	6: 30,375,951 (GRCm39)	D203G	probably damaging	Het
Zfhx2	G	T	14: 55,308,079 (GRCm39)	D932E	probably benign	Het
Zfp267	G	A	3: 36,219,182 (GRCm39)	G402S	probably damaging	Het

Other mutations in Mettl25

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00310:Mettl25	APN	10	105,662,295 (GRCm39)	missense	probably benign
IGL00698:Mettl25	APN	10	105,629,201 (GRCm39)	missense	probably null	0.31
IGL00766:Mettl25	APN	10	105,615,443 (GRCm39)	splice site	probably benign
IGL01360:Mettl25	APN	10	105,659,058 (GRCm39)	missense	probably damaging	1.00
IGL01954:Mettl25	APN	10	105,659,068 (GRCm39)	missense	probably damaging	1.00
IGL02088:Mettl25	APN	10	105,659,111 (GRCm39)	missense	probably damaging	1.00
IGL02623:Mettl25	APN	10	105,662,185 (GRCm39)	missense	probably damaging	0.96
IGL03245:Mettl25	APN	10	105,662,358 (GRCm39)	missense	possibly damaging	0.86
IGL03134:Mettl25	UTSW	10	105,661,888 (GRCm39)	nonsense	probably null
R0238:Mettl25	UTSW	10	105,662,386 (GRCm39)	missense	probably damaging	1.00
R0238:Mettl25	UTSW	10	105,662,386 (GRCm39)	missense	probably damaging	1.00
R0239:Mettl25	UTSW	10	105,662,386 (GRCm39)	missense	probably damaging	1.00
R0239:Mettl25	UTSW	10	105,662,386 (GRCm39)	missense	probably damaging	1.00
R1297:Mettl25	UTSW	10	105,659,126 (GRCm39)	missense	probably benign	0.11
R1482:Mettl25	UTSW	10	105,662,451 (GRCm39)	missense	possibly damaging	0.61
R1526:Mettl25	UTSW	10	105,668,844 (GRCm39)	missense	possibly damaging	0.56
R1542:Mettl25	UTSW	10	105,661,981 (GRCm39)	missense	probably benign	0.04
R1589:Mettl25	UTSW	10	105,615,493 (GRCm39)	missense	probably damaging	1.00
R1901:Mettl25	UTSW	10	105,661,948 (GRCm39)	missense	probably damaging	0.96
R1902:Mettl25	UTSW	10	105,661,948 (GRCm39)	missense	probably damaging	0.96
R2016:Mettl25	UTSW	10	105,633,167 (GRCm39)	missense	probably benign	0.00
R2355:Mettl25	UTSW	10	105,599,316 (GRCm39)	missense	probably benign	0.00
R2920:Mettl25	UTSW	10	105,601,038 (GRCm39)	splice site	probably null
R3149:Mettl25	UTSW	10	105,662,214 (GRCm39)	missense	probably benign	0.00
R4547:Mettl25	UTSW	10	105,661,878 (GRCm39)	missense	probably damaging	1.00
R4646:Mettl25	UTSW	10	105,662,416 (GRCm39)	missense	probably damaging	1.00
R4652:Mettl25	UTSW	10	105,615,509 (GRCm39)	nonsense	probably null
R5020:Mettl25	UTSW	10	105,662,068 (GRCm39)	missense	possibly damaging	0.87
R5435:Mettl25	UTSW	10	105,615,447 (GRCm39)	critical splice donor site	probably null
R6947:Mettl25	UTSW	10	105,662,053 (GRCm39)	missense	probably benign	0.00
R7075:Mettl25	UTSW	10	105,665,785 (GRCm39)	missense	possibly damaging	0.68
R7729:Mettl25	UTSW	10	105,601,871 (GRCm39)	missense	probably benign	0.03
R8074:Mettl25	UTSW	10	105,661,941 (GRCm39)	missense	probably benign	0.02
R8108:Mettl25	UTSW	10	105,659,040 (GRCm39)	missense	possibly damaging	0.53
R8937:Mettl25	UTSW	10	105,601,122 (GRCm39)	missense	probably benign	0.17
R8949:Mettl25	UTSW	10	105,668,714 (GRCm39)	missense	probably benign	0.00
R9497:Mettl25	UTSW	10	105,677,090 (GRCm39)	missense	probably damaging	0.98
R9772:Mettl25	UTSW	10	105,633,127 (GRCm39)	missense	probably benign
RF009:Mettl25	UTSW	10	105,669,100 (GRCm39)	intron	probably benign
Z1176:Mettl25	UTSW	10	105,661,959 (GRCm39)	missense	possibly damaging	0.95

Predicted Primers

PCR Primer
(F):5'- GTATCTCTGTCAACAGCACTTTTG -3'
(R):5'- GCCCAGAGAGTTGAAAGTGC -3'

Sequencing Primer
(F):5'- CGAATCACCTCCAGATCT -3'
(R):5'- CTTGGGAATCCAGACCTGTC -3'

Posted On

2020-10-20