Incidental Mutation 'IGL01909:Or8d1'
| ID |
179748 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or8d1
|
| Ensembl Gene |
ENSMUSG00000047667 |
| Gene Name |
olfactory receptor family 8 subfamily D member 1 |
| Synonyms |
GA_x6K02T2PVTD-32550930-32551856, MOR171-9, MTPCR09, Olfr26 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.079)
|
| Stock # |
IGL01909
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
9 |
| Chromosomal Location |
38766356-38767286 bp(+) (GRCm39) |
| Type of Mutation |
nonsense |
| DNA Base Change (assembly) |
T to A
at 38767013 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tyrosine to Stop codon
at position 218
(Y218*)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000100467
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000104874]
[ENSMUST00000217350]
|
| AlphaFold |
Q7TRB7 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000104874
AA Change: Y218*
|
| SMART Domains |
Protein: ENSMUSP00000100467
Gene: ENSMUSG00000047667
AA Change: Y218*
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
3.8e-49 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
2.4e-22 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000217350
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 35 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 1700111E14Rik |
A |
T |
6: 36,914,152 (GRCm39) |
|
probably benign |
Het |
| Actn2 |
A |
T |
13: 12,324,479 (GRCm39) |
|
probably null |
Het |
| Apom |
C |
T |
17: 35,350,208 (GRCm39) |
A78T |
probably benign |
Het |
| Bambi |
A |
G |
18: 3,508,229 (GRCm39) |
Y7C |
possibly damaging |
Het |
| Cdc42bpb |
T |
C |
12: 111,289,576 (GRCm39) |
M418V |
probably benign |
Het |
| Clptm1 |
T |
C |
7: 19,389,701 (GRCm39) |
N43D |
probably benign |
Het |
| Cspp1 |
T |
C |
1: 10,136,886 (GRCm39) |
V241A |
probably benign |
Het |
| Ctnna3 |
T |
A |
10: 63,339,910 (GRCm39) |
I32N |
probably benign |
Het |
| Elp2 |
A |
G |
18: 24,752,576 (GRCm39) |
|
probably benign |
Het |
| Frmd4a |
A |
G |
2: 4,608,844 (GRCm39) |
D893G |
probably benign |
Het |
| Gm10718 |
A |
T |
9: 3,025,118 (GRCm39) |
Y194F |
probably benign |
Het |
| Gm21738 |
G |
A |
14: 19,416,979 (GRCm38) |
S144L |
probably benign |
Het |
| Gm5862 |
A |
C |
5: 26,227,769 (GRCm39) |
W41G |
probably benign |
Het |
| H2-M10.1 |
C |
A |
17: 36,635,971 (GRCm39) |
G154* |
probably null |
Het |
| Igdcc3 |
C |
T |
9: 65,051,819 (GRCm39) |
R141W |
probably damaging |
Het |
| Igkv14-130 |
A |
G |
6: 67,768,323 (GRCm39) |
K60E |
possibly damaging |
Het |
| Kcnmb2 |
A |
G |
3: 32,252,512 (GRCm39) |
|
probably benign |
Het |
| Lrp4 |
T |
C |
2: 91,324,529 (GRCm39) |
L1288P |
possibly damaging |
Het |
| Mavs |
T |
A |
2: 131,087,441 (GRCm39) |
M313K |
probably benign |
Het |
| Mia2 |
A |
G |
12: 59,154,731 (GRCm39) |
E148G |
possibly damaging |
Het |
| Or6c76b |
A |
T |
10: 129,692,950 (GRCm39) |
T188S |
probably damaging |
Het |
| Or8b12b |
T |
A |
9: 37,684,159 (GRCm39) |
I68K |
possibly damaging |
Het |
| Plekha3 |
C |
T |
2: 76,517,047 (GRCm39) |
T133M |
probably damaging |
Het |
| Plxna1 |
A |
T |
6: 89,309,066 (GRCm39) |
|
probably null |
Het |
| Septin2 |
A |
G |
1: 93,426,823 (GRCm39) |
N144S |
probably damaging |
Het |
| Slc9a4 |
T |
C |
1: 40,651,451 (GRCm39) |
|
probably benign |
Het |
| Slco1b2 |
T |
A |
6: 141,594,312 (GRCm39) |
I59K |
probably damaging |
Het |
| Sp140l2 |
A |
G |
1: 85,231,907 (GRCm39) |
|
probably benign |
Het |
| Tnrc6b |
A |
G |
15: 80,786,184 (GRCm39) |
S1243G |
possibly damaging |
Het |
| Unc13a |
T |
A |
8: 72,091,854 (GRCm39) |
|
probably benign |
Het |
| Vmn2r105 |
T |
C |
17: 20,444,918 (GRCm39) |
R525G |
probably damaging |
Het |
| Vmn2r129 |
C |
T |
4: 156,690,549 (GRCm39) |
|
noncoding transcript |
Het |
| Vmn2r37 |
T |
A |
7: 9,219,032 (GRCm39) |
K451* |
probably null |
Het |
| Vmn2r71 |
C |
T |
7: 85,270,001 (GRCm39) |
T504I |
probably benign |
Het |
| Zfp668 |
A |
T |
7: 127,465,994 (GRCm39) |
C397S |
probably damaging |
Het |
|
| Other mutations in Or8d1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01518:Or8d1
|
APN |
9 |
38,767,095 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02146:Or8d1
|
APN |
9 |
38,766,654 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL02229:Or8d1
|
APN |
9 |
38,766,712 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
IGL02382:Or8d1
|
APN |
9 |
38,766,364 (GRCm39) |
missense |
probably benign |
|
|
IGL03007:Or8d1
|
APN |
9 |
38,766,592 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03118:Or8d1
|
APN |
9 |
38,766,526 (GRCm39) |
missense |
probably damaging |
1.00 |
|
PIT4403001:Or8d1
|
UTSW |
9 |
38,766,676 (GRCm39) |
missense |
probably benign |
0.39 |
|
R0590:Or8d1
|
UTSW |
9 |
38,766,766 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0862:Or8d1
|
UTSW |
9 |
38,766,478 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R1779:Or8d1
|
UTSW |
9 |
38,766,846 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
R1796:Or8d1
|
UTSW |
9 |
38,766,820 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2083:Or8d1
|
UTSW |
9 |
38,766,637 (GRCm39) |
missense |
probably benign |
0.10 |
|
R3420:Or8d1
|
UTSW |
9 |
38,766,621 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R3421:Or8d1
|
UTSW |
9 |
38,766,621 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R4328:Or8d1
|
UTSW |
9 |
38,767,132 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
R4470:Or8d1
|
UTSW |
9 |
38,766,927 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4471:Or8d1
|
UTSW |
9 |
38,766,927 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5047:Or8d1
|
UTSW |
9 |
38,766,585 (GRCm39) |
missense |
probably benign |
0.36 |
|
R5267:Or8d1
|
UTSW |
9 |
38,767,101 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5318:Or8d1
|
UTSW |
9 |
38,766,744 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6502:Or8d1
|
UTSW |
9 |
38,766,933 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7221:Or8d1
|
UTSW |
9 |
38,766,538 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7297:Or8d1
|
UTSW |
9 |
38,767,245 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7448:Or8d1
|
UTSW |
9 |
38,766,412 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7525:Or8d1
|
UTSW |
9 |
38,766,534 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R8040:Or8d1
|
UTSW |
9 |
38,766,460 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8303:Or8d1
|
UTSW |
9 |
38,766,837 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8972:Or8d1
|
UTSW |
9 |
38,767,254 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1177:Or8d1
|
UTSW |
9 |
38,766,531 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2014-05-07 |
Incidental Mutation