Mutagenetix > Incidental Mutation

Incidental Mutation 'R4586:Cyp4a12b'

344089

Institutional Source

Beutler Lab

Gene Symbol

Cyp4a12b

Ensembl Gene

ENSMUSG00000078597

Gene Name

cytochrome P450, family 4, subfamily a, polypeptide 12B

Synonyms

MMRRC Submission

041807-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.088) question?

Stock #

R4586 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

115268821-115296231 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to G at 115289703 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Arginine at position 190 (M190R)

Ref Sequence

ENSEMBL: ENSMUSP00000092487 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000094887]

AlphaFold

A2A974

Predicted Effect

probably damaging
Transcript: ENSMUST00000094887
AA Change: M190R

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000092487
Gene: ENSMUSG00000078597
AA Change: M190R

Domain	Start	End	E-Value	Type
low complexity region	18	39	N/A	INTRINSIC
Pfam:p450	51	503	1.9e-132	PFAM

Meta Mutation Damage Score

0.8659

Coding Region Coverage

1x: 99.3%
3x: 98.6%
10x: 97.3%
20x: 95.3%

Validation Efficiency

100% (96/96)

Allele List at MGI

Other mutations in this stock

Total: 84 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Akap9	T	C	5: 4,026,151 (GRCm39)	S1269P	probably benign	Het
Aqr	T	C	2: 113,943,058 (GRCm39)	T1172A	probably benign	Het
Art2a	A	T	7: 101,203,956 (GRCm39)	L194*	probably null	Het
Atrn	T	C	2: 130,823,962 (GRCm39)	F967S	probably damaging	Het
Btnl1	A	G	17: 34,601,436 (GRCm39)	D323G	probably damaging	Het
Cadps	C	A	14: 12,505,808 (GRCm38)	C754F	probably damaging	Het
Catspere2	A	G	1: 177,950,351 (GRCm39)	D734G	possibly damaging	Het
Ccdc7b	A	G	8: 129,837,401 (GRCm39)	T131A	probably benign	Het
Cfap298	A	T	16: 90,724,314 (GRCm39)	V136D	probably damaging	Het
Cic	A	T	7: 24,972,203 (GRCm39)	I645L	probably benign	Het
Clca3a1	C	A	3: 144,722,619 (GRCm39)	C251F	probably damaging	Het
Cldn16	A	T	16: 26,296,308 (GRCm39)	T95S	probably benign	Het
Cntnap4	C	T	8: 113,537,342 (GRCm39)	H738Y	probably benign	Het
Col8a2	A	T	4: 126,204,812 (GRCm39)		probably benign	Het
Corin	A	T	5: 72,487,042 (GRCm39)	V706D	probably damaging	Het
Cuzd1	G	A	7: 130,916,529 (GRCm39)	P310L	probably damaging	Het
Cyp4a12a	T	C	4: 115,184,509 (GRCm39)	F295L	probably benign	Het
Dagla	A	G	19: 10,248,373 (GRCm39)	Y96H	probably damaging	Het
Dapp1	T	C	3: 137,644,932 (GRCm39)	Q148R	probably benign	Het
Dcaf17	T	A	2: 70,918,924 (GRCm39)	S499R	probably benign	Het
Ddx27	T	A	2: 166,861,904 (GRCm39)	D135E	probably benign	Het
Defb3	A	T	8: 19,345,172 (GRCm39)	I43F	possibly damaging	Het
Dnajc10	T	G	2: 80,178,122 (GRCm39)	F710V	probably damaging	Het
Dnhd1	T	C	7: 105,327,256 (GRCm39)	L735P	probably damaging	Het
Dnmt1	G	A	9: 20,837,989 (GRCm39)	P242S	probably benign	Het
Dync1h1	G	A	12: 110,615,917 (GRCm39)	D3022N	probably benign	Het
Ep400	G	A	5: 110,901,725 (GRCm39)	T464I	probably damaging	Het
Epc1	T	C	18: 6,449,138 (GRCm39)	N453S	possibly damaging	Het
Eral1	A	T	11: 77,969,130 (GRCm39)	N123K	probably damaging	Het
Ercc5	G	A	1: 44,198,017 (GRCm39)	V145I	probably benign	Het
Evc	A	G	5: 37,481,057 (GRCm39)	S263P	probably damaging	Het
Fancc	A	T	13: 63,495,378 (GRCm39)	M182K	probably benign	Het
Fbxl3	G	T	14: 103,320,526 (GRCm39)	A355E	probably damaging	Het
Fig4	A	C	10: 41,064,628 (GRCm39)	S872A	probably damaging	Het
Gm14393	C	A	2: 174,904,497 (GRCm39)		probably benign	Het
Gm27013	A	T	6: 130,498,003 (GRCm39)		noncoding transcript	Het
Gprc5a	T	A	6: 135,060,450 (GRCm39)	M313K	probably benign	Het
H2ac15	T	C	13: 21,937,882 (GRCm39)	N39S	possibly damaging	Het
H2-T3	T	C	17: 36,500,236 (GRCm39)		probably null	Het
Hap1	G	A	11: 100,245,550 (GRCm39)	T138M	probably benign	Het
Hook3	T	G	8: 26,522,039 (GRCm39)	K679T	probably damaging	Het
Ints2	G	T	11: 86,140,101 (GRCm39)	R244S	probably damaging	Het
Itgb4	T	C	11: 115,884,151 (GRCm39)	V945A	probably damaging	Het
Itih2	C	T	2: 10,115,211 (GRCm39)	S387N	probably benign	Het
Jmjd7	T	A	2: 119,862,649 (GRCm39)	M306K	probably benign	Het
Klra2	T	A	6: 131,207,120 (GRCm39)	D163V	probably benign	Het
Kmo	T	A	1: 175,478,138 (GRCm39)	M208K	probably damaging	Het
Kmo	G	T	1: 175,478,139 (GRCm39)	M208I	possibly damaging	Het
Masp2	A	G	4: 148,698,358 (GRCm39)	T480A	probably damaging	Het
Mogs	G	T	6: 83,095,619 (GRCm39)	R812L	possibly damaging	Het
Mrpl43	A	G	19: 44,994,328 (GRCm39)	I97T	possibly damaging	Het
Myoz1	A	G	14: 20,700,663 (GRCm39)	W185R	probably damaging	Het
Ncam2	T	A	16: 81,262,457 (GRCm39)	H303Q	probably benign	Het
Ntaq1	A	T	15: 58,011,740 (GRCm39)	I34F	probably damaging	Het
Nufip2	T	C	11: 77,632,554 (GRCm39)	V690A	unknown	Het
Obox1	A	T	7: 15,290,152 (GRCm39)	N165I	possibly damaging	Het
Or1j1	C	T	2: 36,702,537 (GRCm39)	C189Y	probably damaging	Het
Or4b1d	T	A	2: 89,968,558 (GRCm39)	E308D	probably benign	Het
Or4c113	T	G	2: 88,885,498 (GRCm39)	I91L	possibly damaging	Het
Or6c35	A	G	10: 129,169,142 (GRCm39)	T131A	probably benign	Het
Pex1	A	G	5: 3,683,885 (GRCm39)	Y1127C	probably damaging	Het
Pno1	T	C	11: 17,161,438 (GRCm39)	K24E	probably benign	Het
Qdpr	T	A	5: 45,596,669 (GRCm39)	N165I	possibly damaging	Het
Robo2	A	G	16: 73,758,761 (GRCm39)	V674A	probably damaging	Het
Runx1t1	A	T	4: 13,889,864 (GRCm39)	T598S	unknown	Het
Samd11	A	G	4: 156,333,889 (GRCm39)	L174P	probably damaging	Het
Scn2a	T	A	2: 65,573,395 (GRCm39)		probably null	Het
Slc4a1	G	T	11: 102,252,245 (GRCm39)		probably benign	Het
Snx25	A	T	8: 46,569,474 (GRCm39)		probably benign	Het
Sox2	A	G	3: 34,705,193 (GRCm39)	N210S	probably benign	Het
Spag6	T	C	2: 18,736,958 (GRCm39)		probably null	Het
Speer4b	A	T	5: 27,703,036 (GRCm39)	L154Q	probably null	Het
Stt3a	T	A	9: 36,653,089 (GRCm39)	Q531L	probably damaging	Het
Tcl1	A	C	12: 105,183,767 (GRCm39)		probably benign	Het
Trip11	A	T	12: 101,849,600 (GRCm39)	M1488K	possibly damaging	Het
Ttn	T	C	2: 76,798,747 (GRCm39)	H509R	probably benign	Het
Ulk3	C	T	9: 57,501,593 (GRCm39)	L425F	possibly damaging	Het
Vmn1r238	T	A	18: 3,123,294 (GRCm39)	K40M	probably damaging	Het
Vopp1	G	A	6: 57,731,533 (GRCm39)	P153S	probably damaging	Het
Zbtb42	C	T	12: 112,646,976 (GRCm39)	R384W	probably damaging	Het
Zfp14	G	T	7: 29,738,341 (GRCm39)	Q215K	probably damaging	Het
Zfp473	A	T	7: 44,382,376 (GRCm39)	Y651*	probably null	Het
Zfp735	G	T	11: 73,580,550 (GRCm39)	E16D	possibly damaging	Het
Zfp846	G	T	9: 20,504,809 (GRCm39)	C223F	probably damaging	Het

Other mutations in Cyp4a12b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00850:Cyp4a12b	APN	4	115,295,246 (GRCm39)	splice site	probably null
IGL01571:Cyp4a12b	APN	4	115,295,354 (GRCm39)	missense	probably benign	0.00
IGL02230:Cyp4a12b	APN	4	115,291,193 (GRCm39)	missense	probably damaging	1.00
IGL02720:Cyp4a12b	APN	4	115,292,368 (GRCm39)	splice site	probably benign
IGL03118:Cyp4a12b	APN	4	115,290,173 (GRCm39)	missense	possibly damaging	0.54
IGL03389:Cyp4a12b	APN	4	115,291,005 (GRCm39)	missense	possibly damaging	0.90
R0360:Cyp4a12b	UTSW	4	115,290,117 (GRCm39)	missense	probably benign	0.01
R0364:Cyp4a12b	UTSW	4	115,290,117 (GRCm39)	missense	probably benign	0.01
R0844:Cyp4a12b	UTSW	4	115,289,721 (GRCm39)	missense	possibly damaging	0.67
R1226:Cyp4a12b	UTSW	4	115,290,164 (GRCm39)	missense	possibly damaging	0.80
R1232:Cyp4a12b	UTSW	4	115,289,760 (GRCm39)	missense	possibly damaging	0.81
R1372:Cyp4a12b	UTSW	4	115,290,146 (GRCm39)	missense	probably benign	0.08
R1559:Cyp4a12b	UTSW	4	115,291,181 (GRCm39)	missense	probably damaging	0.98
R1782:Cyp4a12b	UTSW	4	115,291,178 (GRCm39)	missense	probably damaging	1.00
R1817:Cyp4a12b	UTSW	4	115,271,259 (GRCm39)	splice site	probably benign
R1941:Cyp4a12b	UTSW	4	115,295,256 (GRCm39)	missense	probably damaging	1.00
R1978:Cyp4a12b	UTSW	4	115,295,342 (GRCm39)	missense	probably benign	0.01
R2063:Cyp4a12b	UTSW	4	115,290,700 (GRCm39)	missense	possibly damaging	0.87
R2109:Cyp4a12b	UTSW	4	115,290,110 (GRCm39)	missense	probably damaging	0.97
R2911:Cyp4a12b	UTSW	4	115,290,723 (GRCm39)	nonsense	probably null
R3791:Cyp4a12b	UTSW	4	115,292,167 (GRCm39)	missense	probably benign	0.01
R3815:Cyp4a12b	UTSW	4	115,289,667 (GRCm39)	missense	probably damaging	0.98
R3816:Cyp4a12b	UTSW	4	115,289,667 (GRCm39)	missense	probably damaging	0.98
R3817:Cyp4a12b	UTSW	4	115,289,667 (GRCm39)	missense	probably damaging	0.98
R3818:Cyp4a12b	UTSW	4	115,289,667 (GRCm39)	missense	probably damaging	0.98
R5004:Cyp4a12b	UTSW	4	115,295,310 (GRCm39)	missense	probably benign	0.39
R5105:Cyp4a12b	UTSW	4	115,290,958 (GRCm39)	missense	probably damaging	1.00
R5354:Cyp4a12b	UTSW	4	115,290,661 (GRCm39)	splice site	probably null
R5655:Cyp4a12b	UTSW	4	115,290,994 (GRCm39)	missense	probably damaging	1.00
R5814:Cyp4a12b	UTSW	4	115,289,694 (GRCm39)	missense	probably damaging	0.97
R5952:Cyp4a12b	UTSW	4	115,271,714 (GRCm39)	nonsense	probably null
R6004:Cyp4a12b	UTSW	4	115,290,664 (GRCm39)	missense	probably benign	0.35
R6059:Cyp4a12b	UTSW	4	115,295,301 (GRCm39)	missense	possibly damaging	0.94
R6261:Cyp4a12b	UTSW	4	115,271,740 (GRCm39)	nonsense	probably null
R7484:Cyp4a12b	UTSW	4	115,289,760 (GRCm39)	missense	possibly damaging	0.81
R7734:Cyp4a12b	UTSW	4	115,268,937 (GRCm39)	missense	possibly damaging	0.89
R8545:Cyp4a12b	UTSW	4	115,290,227 (GRCm39)	missense	probably benign	0.23
R9031:Cyp4a12b	UTSW	4	115,290,865 (GRCm39)	missense	probably benign	0.00
R9497:Cyp4a12b	UTSW	4	115,271,768 (GRCm39)	missense	probably benign	0.36
RF045:Cyp4a12b	UTSW	4	115,289,690 (GRCm39)	missense	probably benign	0.23

Predicted Primers

PCR Primer
(F):5'- CACAACATCTGATACAGGGAGTC -3'
(R):5'- ATTCAGGCTTCCATCTATCTGG -3'

Sequencing Primer
(F):5'- CATCTGATACAGGGAGTCATAAAATC -3'
(R):5'- TCCATCTATCTGGAAATCTGCAG -3'

Posted On

2015-09-24