Incidental Mutation 'R6937:Epn1'
| ID |
540338 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Epn1
|
| Ensembl Gene |
ENSMUSG00000035203 |
| Gene Name |
epsin 1 |
| Synonyms |
Ibp1 |
| MMRRC Submission |
045051-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R6937 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
7 |
| Chromosomal Location |
5083234-5101177 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 5092943 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Isoleucine to Threonine
at position 85
(I85T)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000146638
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000045277]
[ENSMUST00000098845]
[ENSMUST00000146317]
[ENSMUST00000208634]
|
| AlphaFold |
Q80VP1 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000045277
AA Change: I85T
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
| SMART Domains |
Protein: ENSMUSP00000043340
Gene: ENSMUSG00000035203
AA Change: I85T
| Domain | Start | End | E-Value | Type |
|---|
|
ENTH
|
18 |
144 |
5.84e-65 |
SMART |
|
low complexity region
|
157 |
174 |
N/A |
INTRINSIC |
|
UIM
|
183 |
202 |
2.94e-1 |
SMART |
|
UIM
|
208 |
227 |
4.15e-1 |
SMART |
|
UIM
|
233 |
252 |
5.48e-1 |
SMART |
|
low complexity region
|
279 |
293 |
N/A |
INTRINSIC |
|
low complexity region
|
294 |
316 |
N/A |
INTRINSIC |
|
low complexity region
|
332 |
350 |
N/A |
INTRINSIC |
|
low complexity region
|
363 |
379 |
N/A |
INTRINSIC |
|
low complexity region
|
454 |
466 |
N/A |
INTRINSIC |
|
low complexity region
|
536 |
545 |
N/A |
INTRINSIC |
|
low complexity region
|
550 |
566 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000098845
AA Change: I85T
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
| SMART Domains |
Protein: ENSMUSP00000096445
Gene: ENSMUSG00000035203
AA Change: I85T
| Domain | Start | End | E-Value | Type |
|---|
|
ENTH
|
18 |
144 |
5.84e-65 |
SMART |
|
low complexity region
|
157 |
174 |
N/A |
INTRINSIC |
|
UIM
|
183 |
202 |
2.94e-1 |
SMART |
|
UIM
|
208 |
227 |
4.15e-1 |
SMART |
|
UIM
|
233 |
252 |
5.48e-1 |
SMART |
|
low complexity region
|
279 |
293 |
N/A |
INTRINSIC |
|
low complexity region
|
294 |
316 |
N/A |
INTRINSIC |
|
low complexity region
|
332 |
350 |
N/A |
INTRINSIC |
|
low complexity region
|
363 |
379 |
N/A |
INTRINSIC |
|
low complexity region
|
454 |
466 |
N/A |
INTRINSIC |
|
low complexity region
|
536 |
545 |
N/A |
INTRINSIC |
|
low complexity region
|
550 |
566 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000146317
AA Change: I85T
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
| SMART Domains |
Protein: ENSMUSP00000116571
Gene: ENSMUSG00000035203
AA Change: I85T
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:ENTH
|
17 |
90 |
7.4e-36 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000208634
AA Change: I85T
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| Meta Mutation Damage Score |
0.8568 |
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.1%
- 20x: 97.1%
|
| Validation Efficiency |
98% (42/43) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the epsin protein family. The encoded protein binds clathrin and is involved in the endocytosis of clathrin-coated vesicles. Loss of function of this gene is associated with reduced tumor growth and progression in certain cancer types. [provided by RefSeq, Mar 2016]
PHENOTYPE: Mice homozygous for a null mutation are viable and fertile with no gross abnormalities. Mice homozygous null for both Epn1 and Epn2 display defects in angiogenic vascular remodeling, impaired somitogenesis and extensive cell death in the nervous tissue, resulting in lethality during organogenesis. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 44 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Ankrd52 |
T |
C |
10: 128,222,889 (GRCm39) |
V613A |
probably benign |
Het |
| Cdh23 |
A |
T |
10: 60,322,893 (GRCm39) |
L337Q |
probably damaging |
Het |
| Chrna6 |
A |
G |
8: 27,897,055 (GRCm39) |
L274P |
probably damaging |
Het |
| Ciita |
G |
A |
16: 10,330,355 (GRCm39) |
|
probably null |
Het |
| Csnka2ip |
A |
T |
16: 64,299,058 (GRCm39) |
|
probably benign |
Het |
| Ddx60 |
G |
A |
8: 62,490,103 (GRCm39) |
D1691N |
probably damaging |
Het |
| Dnah7b |
T |
C |
1: 46,234,280 (GRCm39) |
I1441T |
probably damaging |
Het |
| Dock4 |
T |
C |
12: 40,884,634 (GRCm39) |
S1713P |
probably benign |
Het |
| Ep400 |
T |
C |
5: 110,859,018 (GRCm39) |
|
probably benign |
Het |
| Eri2 |
T |
C |
7: 119,386,012 (GRCm39) |
K228E |
probably damaging |
Het |
| Garem1 |
C |
T |
18: 21,280,827 (GRCm39) |
A510T |
probably benign |
Het |
| Gfm2 |
T |
A |
13: 97,299,572 (GRCm39) |
|
probably null |
Het |
| Hnrnpd |
T |
C |
5: 100,111,629 (GRCm39) |
T321A |
probably benign |
Het |
| Htr2a |
A |
T |
14: 74,882,604 (GRCm39) |
I197F |
probably damaging |
Het |
| Krtap2-4 |
T |
A |
11: 99,505,299 (GRCm39) |
|
probably benign |
Het |
| Lcn3 |
C |
A |
2: 25,657,823 (GRCm39) |
Y179* |
probably null |
Het |
| Mak |
A |
T |
13: 41,201,578 (GRCm39) |
M261K |
probably damaging |
Het |
| Marchf7 |
A |
G |
2: 60,071,310 (GRCm39) |
T605A |
probably damaging |
Het |
| Mcm4 |
A |
C |
16: 15,454,199 (GRCm39) |
F83V |
probably benign |
Het |
| Myo18b |
T |
C |
5: 112,950,258 (GRCm39) |
N1546S |
probably benign |
Het |
| Nckap1 |
T |
A |
2: 80,339,060 (GRCm39) |
K989N |
probably damaging |
Het |
| Ndufaf5 |
A |
G |
2: 140,023,522 (GRCm39) |
D119G |
probably damaging |
Het |
| Or7g28 |
A |
T |
9: 19,271,985 (GRCm39) |
V222D |
probably damaging |
Het |
| Pcdh1 |
T |
C |
18: 38,336,528 (GRCm39) |
T36A |
possibly damaging |
Het |
| Pitpna |
C |
T |
11: 75,494,557 (GRCm39) |
T100I |
possibly damaging |
Het |
| Pmf1 |
A |
T |
3: 88,306,496 (GRCm39) |
L102Q |
probably damaging |
Het |
| Rftn2 |
T |
C |
1: 55,233,508 (GRCm39) |
|
probably null |
Het |
| Robo3 |
A |
G |
9: 37,341,176 (GRCm39) |
L10P |
probably benign |
Het |
| Serpinb6a |
T |
C |
13: 34,102,801 (GRCm39) |
I241V |
possibly damaging |
Het |
| St14 |
A |
T |
9: 31,040,956 (GRCm39) |
|
probably null |
Het |
| Stat6 |
T |
C |
10: 127,494,571 (GRCm39) |
|
probably null |
Het |
| Tdpoz6 |
T |
C |
3: 93,599,523 (GRCm39) |
N282S |
probably benign |
Het |
| Tdpoz8 |
A |
G |
3: 92,981,417 (GRCm39) |
H145R |
probably benign |
Het |
| Tenm4 |
G |
A |
7: 96,202,703 (GRCm39) |
R106H |
probably benign |
Het |
| Tgfbrap1 |
A |
T |
1: 43,091,064 (GRCm39) |
V687E |
probably damaging |
Het |
| Trim30d |
A |
T |
7: 104,132,634 (GRCm39) |
S68T |
probably damaging |
Het |
| Ttn |
A |
G |
2: 76,663,253 (GRCm39) |
|
probably benign |
Het |
| Ugt3a1 |
A |
T |
15: 9,292,158 (GRCm39) |
D97V |
probably benign |
Het |
| Ugt8a |
G |
A |
3: 125,709,250 (GRCm39) |
|
probably benign |
Het |
| Vmn1r184 |
A |
T |
7: 25,966,750 (GRCm39) |
K165N |
probably benign |
Het |
| Vmn2r86 |
T |
A |
10: 130,284,523 (GRCm39) |
I523F |
probably damaging |
Het |
| Wapl |
G |
A |
14: 34,444,311 (GRCm39) |
V588I |
probably benign |
Het |
| Wdr7 |
C |
T |
18: 63,924,938 (GRCm39) |
P974S |
probably benign |
Het |
| Zfp975 |
T |
C |
7: 42,314,480 (GRCm39) |
D31G |
possibly damaging |
Het |
|
| Other mutations in Epn1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02227:Epn1
|
APN |
7 |
5,098,035 (GRCm39) |
missense |
probably benign |
0.19 |
|
IGL03126:Epn1
|
APN |
7 |
5,098,684 (GRCm39) |
missense |
probably benign |
0.01 |
|
epsilon
|
UTSW |
7 |
5,098,047 (GRCm39) |
missense |
probably benign |
|
|
R1074:Epn1
|
UTSW |
7 |
5,098,047 (GRCm39) |
missense |
probably benign |
|
|
R1365:Epn1
|
UTSW |
7 |
5,096,369 (GRCm39) |
missense |
probably benign |
0.05 |
|
R1848:Epn1
|
UTSW |
7 |
5,092,997 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2041:Epn1
|
UTSW |
7 |
5,086,874 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2237:Epn1
|
UTSW |
7 |
5,100,601 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R2238:Epn1
|
UTSW |
7 |
5,100,601 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R2239:Epn1
|
UTSW |
7 |
5,100,601 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R4255:Epn1
|
UTSW |
7 |
5,100,637 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4324:Epn1
|
UTSW |
7 |
5,100,210 (GRCm39) |
missense |
probably benign |
0.07 |
|
R4542:Epn1
|
UTSW |
7 |
5,096,980 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R4703:Epn1
|
UTSW |
7 |
5,098,147 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4740:Epn1
|
UTSW |
7 |
5,093,012 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4845:Epn1
|
UTSW |
7 |
5,096,908 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R5838:Epn1
|
UTSW |
7 |
5,100,165 (GRCm39) |
nonsense |
probably null |
|
|
R5952:Epn1
|
UTSW |
7 |
5,096,911 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6251:Epn1
|
UTSW |
7 |
5,098,935 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6251:Epn1
|
UTSW |
7 |
5,098,925 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6296:Epn1
|
UTSW |
7 |
5,093,122 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R6710:Epn1
|
UTSW |
7 |
5,100,303 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7196:Epn1
|
UTSW |
7 |
5,096,380 (GRCm39) |
missense |
possibly damaging |
0.68 |
|
R7420:Epn1
|
UTSW |
7 |
5,100,687 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
R7948:Epn1
|
UTSW |
7 |
5,092,992 (GRCm39) |
nonsense |
probably null |
|
|
R8766:Epn1
|
UTSW |
7 |
5,095,860 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R8843:Epn1
|
UTSW |
7 |
5,096,375 (GRCm39) |
missense |
probably benign |
0.36 |
|
R9059:Epn1
|
UTSW |
7 |
5,098,067 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9315:Epn1
|
UTSW |
7 |
5,096,339 (GRCm39) |
missense |
probably benign |
|
|
R9376:Epn1
|
UTSW |
7 |
5,086,720 (GRCm39) |
unclassified |
probably benign |
|
|
R9432:Epn1
|
UTSW |
7 |
5,096,369 (GRCm39) |
missense |
probably benign |
0.22 |
|
X0065:Epn1
|
UTSW |
7 |
5,098,092 (GRCm39) |
missense |
probably benign |
0.02 |
|
| Predicted Primers |
PCR Primer
(F):5'- ATAGTCCGTGCTGGTGTCAC -3'
(R):5'- AGTGGGAGAGAAACCTCACC -3'
Sequencing Primer
(F):5'- TATCCATGGGAGCACACATTGTG -3'
(R):5'- GAGAGAAACCTCACCCGTGG -3'
|
| Posted On |
2018-11-06 |
Incidental Mutation