Mutagenetix > Incidental Mutation

Incidental Mutation 'R9072:Ccdc110'

689606

Institutional Source

Beutler Lab

Gene Symbol

Ccdc110

Ensembl Gene

ENSMUSG00000071104

Gene Name

coiled-coil domain containing 110

Synonyms

LOC212392

MMRRC Submission

Accession Numbers

Genbank: NM_001033246; MGI: 2685018

Essential gene?

Probably non essential (E-score: 0.060) question?

Stock #

R9072 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

45934619-45944145 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 45942838 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Leucine at position 589 (M589L)

Ref Sequence

ENSEMBL: ENSMUSP00000092964 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000095326] [ENSMUST00000174815]

AlphaFold

Q3V125

Predicted Effect

probably benign
Transcript: ENSMUST00000095326
AA Change: M589L

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)

SMART Domains

Protein: ENSMUSP00000092964
Gene: ENSMUSG00000071104
AA Change: M589L

Domain	Start	End	E-Value	Type
coiled coil region	442	794	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000174815

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 73 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aak1	T	A	6: 86,944,392	Y190*	probably null	Het
Agbl3	T	C	6: 34,799,452	C298R	probably damaging	Het
Ankrd26	T	A	6: 118,523,389	K1040N	probably damaging	Het
Ano3	T	A	2: 110,745,898	T93S	probably benign	Het
Apoc3	T	A	9: 46,233,234	I97F	probably benign	Het
Arid5a	A	G	1: 36,319,545	E401G	probably benign	Het
Atxn3	T	C	12: 101,937,471		probably null	Het
Brca1	C	T	11: 101,502,480		probably null	Het
C1ql3	T	A	2: 13,010,387	N154I	probably damaging	Het
Ccnb2	A	T	9: 70,410,813	F226I	possibly damaging	Het
Commd8	TTGTCATCT	TT	5: 72,160,984		probably null	Het
Dis3	T	C	14: 99,095,211	T262A	probably benign	Het
Eif4a2	G	A	16: 23,110,653	R234Q	probably benign	Het
Ephx2	G	A	14: 66,086,239	R481*	probably null	Het
Fbxo15	T	C	18: 84,965,520	I331T	possibly damaging	Het
Gfra2	A	G	14: 70,901,495	E121G	possibly damaging	Het
Git1	G	A	11: 77,499,075	A55T	probably benign	Het
Hfm1	T	C	5: 106,898,280	I553V	probably benign	Het
Hydin	G	A	8: 110,267,451		probably null	Het
Iqgap3	A	G	3: 88,109,466	N1085S		Het
Kbtbd12	T	C	6: 88,618,440	Y136C	probably damaging	Het
Kcng3	A	G	17: 83,630,994	Y209H	possibly damaging	Het
Kcnj2	A	T	11: 111,071,838	M19L	possibly damaging	Het
Lonrf2	A	T	1: 38,811,786	F232I	probably damaging	Het
Lrrc31	T	C	3: 30,699,710	D14G	probably benign	Het
Ly6l	G	A	15: 75,449,736	V62I	possibly damaging	Het
March8	T	C	6: 116,401,923	F273L	probably benign	Het
Masp1	A	C	16: 23,469,921	S710A	probably benign	Het
Mcm10	G	A	2: 5,008,603	R73C	possibly damaging	Het
Mcm5	G	A	8: 75,126,306	R682H	probably damaging	Het
Mink1	C	T	11: 70,608,381	T684I	possibly damaging	Het
Mocos	A	T	18: 24,664,032	Q83L	probably damaging	Het
Nags	T	C	11: 102,147,521	L351P	probably damaging	Het
Nalcn	G	A	14: 123,295,451	T1299I	possibly damaging	Het
Nlrp4b	A	G	7: 10,725,943	D824G	probably benign	Het
Nwd1	A	T	8: 72,695,418	M1031L	probably benign	Het
Olfr1164	T	A	2: 88,093,828	Q36L	probably benign	Het
Olfr1188	A	C	2: 88,560,314	I271L	probably benign	Het
Olfr1286	A	T	2: 111,420,360	I197N	possibly damaging	Het
Olfr1466	A	G	19: 13,341,874	T39A	possibly damaging	Het
Olfr657	C	T	7: 104,636,084	R137C	probably benign	Het
Olfr743	C	T	14: 50,533,754	T114I	probably benign	Het
Pan2	T	C	10: 128,315,181	M807T	probably damaging	Het
Parp8	A	T	13: 116,911,415	I222N	probably damaging	Het
Pmm1	C	T	15: 81,955,695	R143H	probably damaging	Het
Pou1f1	T	C	16: 65,531,947	L186P		Het
Ppargc1b	G	A	18: 61,310,659	R494W	probably damaging	Het
Prg4	G	T	1: 150,455,537	P462T	unknown	Het
Ptcd1	T	A	5: 145,154,715	I525L	probably benign	Het
Ptchd4	A	T	17: 42,502,759	Y517F	probably damaging	Het
Pum1	T	C	4: 130,752,861	F693S	probably damaging	Het
Ribc2	A	C	15: 85,137,962	Q186P	probably damaging	Het
Sesn2	C	A	4: 132,496,884		probably null	Het
Sgf29	G	A	7: 126,672,654	V284M	probably damaging	Het
Skap2	C	T	6: 51,879,770		probably null	Het
Smap1	T	A	1: 23,922,073	E28V	probably damaging	Het
Smc3	A	G	19: 53,628,769	N538D	probably benign	Het
Spen	T	C	4: 141,476,391	T1642A	unknown	Het
Spred3	G	A	7: 29,166,530	R115*	probably null	Het
Sugt1	T	A	14: 79,628,853	M304K	possibly damaging	Het
Sval1	T	C	6: 41,951,672	I6T	possibly damaging	Het
Svil	T	C	18: 5,097,500	I1574T	probably benign	Het
Tinag	T	A	9: 76,997,018		probably null	Het
Trak1	T	C	9: 121,460,488	L622P	probably damaging	Het
Ttn	C	T	2: 76,755,874	D21838N	probably damaging	Het
Ttn	ATATCTCTCCAGAGCCTCCCCTGGAGGAGTGGAGTATCTCTCCAGAGCCTCCCCTGGAGGAGTGGAGTATCTCTCCAGAGCCTCCCCTG	ATATCTCTCCAGAGCCTCCCCTGGAGGAGTGGAGTATCTCTCCAGAGCCTCCCCTG	2: 76,915,806		probably benign	Het
Vmn1r43	G	A	6: 89,869,895	T203M	probably damaging	Het
Vmn1r73	C	T	7: 11,756,276	A7V	probably benign	Het
Yy1	G	T	12: 108,793,995	G195C	probably benign	Het
Zbtb17	T	A	4: 141,466,365	C607S	possibly damaging	Het
Zfp735	T	C	11: 73,712,234	V668A	probably benign	Het
Zfp819	C	A	7: 43,617,146	T351K	probably damaging	Het
Zfp820	C	A	17: 21,820,050	S99I	possibly damaging	Het

Other mutations in Ccdc110

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01898:Ccdc110	APN	8	45942124	missense	possibly damaging	0.76
IGL02175:Ccdc110	APN	8	45940623	missense	probably benign	0.07
IGL02471:Ccdc110	APN	8	45941756	missense	probably benign	0.14
IGL02524:Ccdc110	APN	8	45941942	missense	probably benign
IGL02887:Ccdc110	APN	8	45943184	missense	probably benign	0.01
IGL03227:Ccdc110	APN	8	45941549	missense	probably damaging	1.00
IGL03238:Ccdc110	APN	8	45941822	missense	probably benign	0.00
droll	UTSW	8	45942827	missense	probably benign	0.10
humorless	UTSW	8	45943450	missense	probably benign	0.03
R0049:Ccdc110	UTSW	8	45942626	missense	probably damaging	1.00
R0049:Ccdc110	UTSW	8	45942626	missense	probably damaging	1.00
R0110:Ccdc110	UTSW	8	45935157	missense	probably benign	0.00
R0189:Ccdc110	UTSW	8	45935082	missense	probably damaging	0.98
R0218:Ccdc110	UTSW	8	45934724	splice site	probably benign
R0280:Ccdc110	UTSW	8	45943450	missense	probably benign	0.03
R0332:Ccdc110	UTSW	8	45942964	nonsense	probably null
R0371:Ccdc110	UTSW	8	45942806	missense	possibly damaging	0.86
R0469:Ccdc110	UTSW	8	45935157	missense	probably benign	0.00
R0502:Ccdc110	UTSW	8	45934724	splice site	probably benign
R0510:Ccdc110	UTSW	8	45935157	missense	probably benign	0.00
R0534:Ccdc110	UTSW	8	45935138	missense	possibly damaging	0.73
R0647:Ccdc110	UTSW	8	45943388	missense	probably damaging	0.99
R0714:Ccdc110	UTSW	8	45943010	missense	possibly damaging	0.71
R0721:Ccdc110	UTSW	8	45941989	missense	probably benign
R1029:Ccdc110	UTSW	8	45941780	missense	probably damaging	0.98
R1147:Ccdc110	UTSW	8	45944084	missense	possibly damaging	0.64
R1147:Ccdc110	UTSW	8	45944084	missense	possibly damaging	0.64
R1170:Ccdc110	UTSW	8	45941885	missense	probably benign	0.22
R1340:Ccdc110	UTSW	8	45942181	missense	probably benign	0.02
R1540:Ccdc110	UTSW	8	45942325	nonsense	probably null
R1587:Ccdc110	UTSW	8	45941746	missense	probably benign	0.01
R1602:Ccdc110	UTSW	8	45938918	missense	probably benign	0.12
R1629:Ccdc110	UTSW	8	45942127	missense	probably benign	0.08
R1842:Ccdc110	UTSW	8	45940568	missense	probably damaging	1.00
R1933:Ccdc110	UTSW	8	45943250	missense	probably damaging	1.00
R1934:Ccdc110	UTSW	8	45943250	missense	probably damaging	1.00
R2006:Ccdc110	UTSW	8	45943312	missense	probably damaging	1.00
R2043:Ccdc110	UTSW	8	45942827	missense	probably benign	0.10
R2093:Ccdc110	UTSW	8	45942077	missense	probably damaging	1.00
R2165:Ccdc110	UTSW	8	45942839	missense	probably benign	0.00
R3613:Ccdc110	UTSW	8	45942806	missense	possibly damaging	0.86
R3923:Ccdc110	UTSW	8	45942389	missense	probably damaging	1.00
R4648:Ccdc110	UTSW	8	45942668	missense	possibly damaging	0.95
R4773:Ccdc110	UTSW	8	45943208	missense	probably damaging	1.00
R4901:Ccdc110	UTSW	8	45943400	missense	probably benign	0.35
R4911:Ccdc110	UTSW	8	45942907	missense	probably benign	0.00
R4923:Ccdc110	UTSW	8	45943423	missense	probably benign	0.29
R5104:Ccdc110	UTSW	8	45942692	missense	probably damaging	0.99
R5561:Ccdc110	UTSW	8	45940609	missense	probably benign	0.02
R5966:Ccdc110	UTSW	8	45942536	missense	probably damaging	1.00
R5976:Ccdc110	UTSW	8	45943499	missense	possibly damaging	0.71
R6141:Ccdc110	UTSW	8	45941770	missense	possibly damaging	0.89
R6326:Ccdc110	UTSW	8	45942041	missense	probably damaging	1.00
R6366:Ccdc110	UTSW	8	45943388	missense	probably damaging	0.99
R6405:Ccdc110	UTSW	8	45941697	nonsense	probably null
R6482:Ccdc110	UTSW	8	45942788	missense	probably benign	0.00
R6815:Ccdc110	UTSW	8	45941987	missense	probably benign	0.19
R7387:Ccdc110	UTSW	8	45942196	missense	probably benign	0.00
R7680:Ccdc110	UTSW	8	45941651	missense	possibly damaging	0.64
R8099:Ccdc110	UTSW	8	45942093	missense	probably damaging	1.00
R8114:Ccdc110	UTSW	8	45943103	missense	probably damaging	1.00
R8151:Ccdc110	UTSW	8	45942793	missense	probably damaging	1.00
R8295:Ccdc110	UTSW	8	45943379	missense	probably damaging	0.97
R8532:Ccdc110	UTSW	8	45942995	missense	probably damaging	1.00
R9073:Ccdc110	UTSW	8	45942838	missense	probably benign	0.00
R9088:Ccdc110	UTSW	8	45941845	missense	probably damaging	0.99
R9803:Ccdc110	UTSW	8	45942589	missense	probably benign
X0053:Ccdc110	UTSW	8	45942961	missense	possibly damaging	0.56
X0054:Ccdc110	UTSW	8	45941843	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CAAAGACTGCCTCAGGGAAC -3'
(R):5'- TAGACTGTGAAGAAGCGACTCC -3'

Sequencing Primer
(F):5'- ACTTACAACGTCCTCGGAGG -3'
(R):5'- TGTGAAGAAGCGACTCCTGCTC -3'

Posted On

2021-11-19