Incidental Mutation 'R9277:Zer1'
| ID |
703351 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Zer1
|
| Ensembl Gene |
ENSMUSG00000039686 |
| Gene Name |
zyg-11 related, cell cycle regulator |
| Synonyms |
Zyg11bl, C230075L19Rik |
| MMRRC Submission |
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.134)
|
| Stock # |
R9277 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
2 |
| Chromosomal Location |
29987295-30014597 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 30001297 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Threonine to Isoleucine
at position 69
(T69I)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000046441
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000044751]
[ENSMUST00000113677]
|
| AlphaFold |
Q80ZJ6 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000044751
AA Change: T69I
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
| SMART Domains |
Protein: ENSMUSP00000046441
Gene: ENSMUSG00000039686
AA Change: T69I
| Domain | Start | End | E-Value | Type |
|---|
|
SCOP:d1jdha_
|
405 |
774 |
3e-15 |
SMART |
|
Blast:ARM
|
440 |
480 |
2e-18 |
BLAST |
|
Blast:ARM
|
524 |
569 |
4e-24 |
BLAST |
|
Blast:ARM
|
571 |
613 |
6e-22 |
BLAST |
|
Blast:ARM
|
617 |
656 |
7e-8 |
BLAST |
|
Blast:ARM
|
686 |
724 |
6e-18 |
BLAST |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000113677
AA Change: T69I
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
| SMART Domains |
Protein: ENSMUSP00000109307
Gene: ENSMUSG00000039686
AA Change: T69I
| Domain | Start | End | E-Value | Type |
|---|
|
SCOP:d1jdha_
|
392 |
761 |
3e-15 |
SMART |
|
Blast:ARM
|
427 |
467 |
2e-18 |
BLAST |
|
Blast:ARM
|
511 |
556 |
4e-24 |
BLAST |
|
Blast:ARM
|
558 |
600 |
2e-21 |
BLAST |
|
Blast:ARM
|
604 |
643 |
7e-8 |
BLAST |
|
Blast:ARM
|
673 |
711 |
6e-18 |
BLAST |
|
| Meta Mutation Damage Score |
0.0846 |
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.7%
- 20x: 98.9%
|
| Validation Efficiency |
100% (55/55) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a subunit of an E3 ubiquitin ligase complex that may be involved in meiosis. The encoded protein contains three leucine-rich repeat motifs. [provided by RefSeq, Nov 2012]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 57 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca8b |
T |
C |
11: 109,867,347 (GRCm39) |
Y237C |
probably damaging |
Het |
| Adam12 |
T |
C |
7: 133,521,561 (GRCm39) |
S566G |
probably benign |
Het |
| Afdn |
T |
A |
17: 14,024,270 (GRCm39) |
C59S |
probably damaging |
Het |
| Apob |
A |
T |
12: 8,061,183 (GRCm39) |
I3222F |
probably benign |
Het |
| Cdyl |
A |
G |
13: 36,042,222 (GRCm39) |
D420G |
probably benign |
Het |
| Cela1 |
C |
A |
15: 100,580,894 (GRCm39) |
A121S |
possibly damaging |
Het |
| Clip2 |
A |
G |
5: 134,528,963 (GRCm39) |
M822T |
probably benign |
Het |
| Coq8a |
G |
A |
1: 180,006,776 (GRCm39) |
T84I |
probably benign |
Het |
| Dars2 |
G |
A |
1: 160,877,527 (GRCm39) |
A390V |
probably benign |
Het |
| Dhx40 |
C |
T |
11: 86,661,056 (GRCm39) |
M744I |
probably benign |
Het |
| Dnajc14 |
A |
G |
10: 128,642,689 (GRCm39) |
I204V |
probably benign |
Het |
| Eftud2 |
A |
C |
11: 102,750,855 (GRCm39) |
F322V |
probably damaging |
Het |
| Eif4g2 |
G |
A |
7: 110,674,066 (GRCm39) |
A646V |
probably damaging |
Het |
| Faim2 |
T |
C |
15: 99,419,097 (GRCm39) |
T91A |
probably benign |
Het |
| Fancl |
A |
T |
11: 26,418,847 (GRCm39) |
I290F |
possibly damaging |
Het |
| Fermt3 |
A |
T |
19: 6,991,245 (GRCm39) |
Y253N |
possibly damaging |
Het |
| Fhip1a |
C |
A |
3: 85,579,565 (GRCm39) |
R880L |
probably benign |
Het |
| Frem3 |
T |
A |
8: 81,417,402 (GRCm39) |
S2036T |
probably damaging |
Het |
| Gm10330 |
A |
T |
12: 23,829,911 (GRCm39) |
V90E |
probably damaging |
Het |
| Golga1 |
T |
C |
2: 38,914,255 (GRCm39) |
E488G |
probably benign |
Het |
| Gpatch11 |
T |
A |
17: 79,148,446 (GRCm39) |
L128Q |
possibly damaging |
Het |
| Hoxd9 |
A |
G |
2: 74,529,539 (GRCm39) |
N265S |
possibly damaging |
Het |
| Igfn1 |
C |
T |
1: 135,887,520 (GRCm39) |
V2515M |
probably damaging |
Het |
| Itga2b |
A |
G |
11: 102,351,982 (GRCm39) |
L505P |
probably damaging |
Het |
| Klrg2 |
A |
G |
6: 38,613,491 (GRCm39) |
S171P |
probably benign |
Het |
| Lamtor5 |
A |
G |
3: 107,186,404 (GRCm39) |
T58A |
probably benign |
Het |
| Lgr6 |
G |
T |
1: 134,915,217 (GRCm39) |
C787* |
probably null |
Het |
| Madd |
A |
G |
2: 91,006,055 (GRCm39) |
F380S |
probably damaging |
Het |
| Magi1 |
A |
T |
6: 93,920,234 (GRCm39) |
H127Q |
possibly damaging |
Het |
| Maml2 |
A |
G |
9: 13,531,872 (GRCm39) |
E362G |
|
Het |
| Morc2b |
C |
T |
17: 33,354,997 (GRCm39) |
G925D |
probably benign |
Het |
| Nalcn |
C |
T |
14: 123,518,523 (GRCm39) |
R1672H |
probably damaging |
Het |
| Npsr1 |
A |
G |
9: 24,224,493 (GRCm39) |
Y290C |
possibly damaging |
Het |
| Obox5 |
A |
T |
7: 15,491,877 (GRCm39) |
E97D |
probably damaging |
Het |
| Parn |
C |
T |
16: 13,482,519 (GRCm39) |
|
probably null |
Het |
| Pip4k2b |
A |
T |
11: 97,613,272 (GRCm39) |
N241K |
probably damaging |
Het |
| Pkn2 |
A |
G |
3: 142,516,509 (GRCm39) |
V539A |
probably benign |
Het |
| Plpp7 |
A |
T |
2: 31,985,824 (GRCm39) |
M1L |
probably damaging |
Het |
| Pramel43 |
T |
C |
5: 94,762,843 (GRCm39) |
T60A |
probably benign |
Het |
| Pramel44 |
A |
G |
5: 94,771,917 (GRCm39) |
T16A |
probably benign |
Het |
| Prtg |
G |
A |
9: 72,716,929 (GRCm39) |
S90N |
probably benign |
Het |
| Rgs7bp |
G |
A |
13: 105,100,618 (GRCm39) |
T219M |
probably damaging |
Het |
| Scgb1b20 |
G |
A |
7: 33,072,998 (GRCm39) |
D69N |
probably benign |
Het |
| Setd2 |
A |
G |
9: 110,379,619 (GRCm39) |
T1145A |
probably damaging |
Het |
| Slc49a3 |
G |
T |
5: 108,589,864 (GRCm39) |
P513T |
probably benign |
Het |
| Tmem145 |
A |
G |
7: 25,009,165 (GRCm39) |
Q359R |
probably benign |
Het |
| Trmt5 |
C |
A |
12: 73,329,448 (GRCm39) |
D237Y |
probably damaging |
Het |
| Vmn1r169 |
A |
T |
7: 23,277,390 (GRCm39) |
I261F |
probably benign |
Het |
| Vmn1r19 |
A |
T |
6: 57,382,322 (GRCm39) |
I292F |
unknown |
Het |
| Vmn2r66 |
T |
C |
7: 84,661,164 (GRCm39) |
D22G |
probably benign |
Het |
| Vwa3b |
T |
A |
1: 37,196,534 (GRCm39) |
|
probably null |
Het |
| Wbp4 |
T |
A |
14: 79,714,353 (GRCm39) |
D53V |
probably benign |
Het |
| Xpo1 |
A |
G |
11: 23,241,550 (GRCm39) |
I866V |
probably benign |
Het |
| Zan |
G |
A |
5: 137,462,254 (GRCm39) |
P975L |
unknown |
Het |
| Zdhhc19 |
G |
A |
16: 32,316,512 (GRCm39) |
R89Q |
probably benign |
Het |
| Zfp827 |
C |
T |
8: 79,787,029 (GRCm39) |
T65I |
probably damaging |
Het |
| Zswim9 |
A |
G |
7: 12,994,983 (GRCm39) |
F391S |
probably damaging |
Het |
|
| Other mutations in Zer1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01098:Zer1
|
APN |
2 |
29,998,232 (GRCm39) |
critical splice donor site |
probably null |
|
|
IGL01630:Zer1
|
APN |
2 |
29,991,843 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02126:Zer1
|
APN |
2 |
29,994,928 (GRCm39) |
missense |
probably benign |
0.10 |
|
IGL02338:Zer1
|
APN |
2 |
30,003,405 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02817:Zer1
|
APN |
2 |
29,993,406 (GRCm39) |
missense |
probably damaging |
0.99 |
|
PIT4402001:Zer1
|
UTSW |
2 |
29,991,132 (GRCm39) |
missense |
probably damaging |
0.96 |
|
PIT4495001:Zer1
|
UTSW |
2 |
29,993,555 (GRCm39) |
missense |
probably benign |
0.01 |
|
R0390:Zer1
|
UTSW |
2 |
29,998,225 (GRCm39) |
splice site |
probably benign |
|
|
R0506:Zer1
|
UTSW |
2 |
29,991,819 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0606:Zer1
|
UTSW |
2 |
29,994,809 (GRCm39) |
splice site |
probably benign |
|
|
R0928:Zer1
|
UTSW |
2 |
29,991,775 (GRCm39) |
critical splice donor site |
probably null |
|
|
R1167:Zer1
|
UTSW |
2 |
29,998,258 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1819:Zer1
|
UTSW |
2 |
30,000,230 (GRCm39) |
missense |
probably benign |
0.18 |
|
R2040:Zer1
|
UTSW |
2 |
29,998,286 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2041:Zer1
|
UTSW |
2 |
29,998,286 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2042:Zer1
|
UTSW |
2 |
29,998,286 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2092:Zer1
|
UTSW |
2 |
29,998,286 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2168:Zer1
|
UTSW |
2 |
29,994,887 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2243:Zer1
|
UTSW |
2 |
29,991,139 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2254:Zer1
|
UTSW |
2 |
29,998,286 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2255:Zer1
|
UTSW |
2 |
29,998,286 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2311:Zer1
|
UTSW |
2 |
29,991,834 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2993:Zer1
|
UTSW |
2 |
29,991,909 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3010:Zer1
|
UTSW |
2 |
30,003,297 (GRCm39) |
missense |
probably benign |
0.13 |
|
R3731:Zer1
|
UTSW |
2 |
30,000,923 (GRCm39) |
missense |
probably benign |
0.44 |
|
R4038:Zer1
|
UTSW |
2 |
29,997,535 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5241:Zer1
|
UTSW |
2 |
29,994,982 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5433:Zer1
|
UTSW |
2 |
29,990,998 (GRCm39) |
intron |
probably benign |
|
|
R5443:Zer1
|
UTSW |
2 |
30,001,008 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5524:Zer1
|
UTSW |
2 |
29,994,866 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5936:Zer1
|
UTSW |
2 |
29,997,679 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R5999:Zer1
|
UTSW |
2 |
29,995,009 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6598:Zer1
|
UTSW |
2 |
30,003,286 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6965:Zer1
|
UTSW |
2 |
29,991,059 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R7030:Zer1
|
UTSW |
2 |
30,001,033 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7190:Zer1
|
UTSW |
2 |
29,993,444 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7218:Zer1
|
UTSW |
2 |
29,995,024 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7252:Zer1
|
UTSW |
2 |
29,991,904 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7383:Zer1
|
UTSW |
2 |
30,001,253 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7417:Zer1
|
UTSW |
2 |
29,992,834 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7459:Zer1
|
UTSW |
2 |
30,003,337 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7463:Zer1
|
UTSW |
2 |
30,003,449 (GRCm39) |
start gained |
probably benign |
|
|
R7466:Zer1
|
UTSW |
2 |
29,991,496 (GRCm39) |
splice site |
probably null |
|
|
R7477:Zer1
|
UTSW |
2 |
29,997,988 (GRCm39) |
missense |
probably null |
0.34 |
|
R7719:Zer1
|
UTSW |
2 |
30,001,243 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7813:Zer1
|
UTSW |
2 |
30,000,385 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7976:Zer1
|
UTSW |
2 |
29,997,520 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8239:Zer1
|
UTSW |
2 |
29,991,147 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R8350:Zer1
|
UTSW |
2 |
29,991,862 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8404:Zer1
|
UTSW |
2 |
29,995,035 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R8842:Zer1
|
UTSW |
2 |
30,001,062 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
R8896:Zer1
|
UTSW |
2 |
29,993,430 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8906:Zer1
|
UTSW |
2 |
30,001,035 (GRCm39) |
missense |
probably benign |
0.31 |
|
R8929:Zer1
|
UTSW |
2 |
30,000,881 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9050:Zer1
|
UTSW |
2 |
30,001,294 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9066:Zer1
|
UTSW |
2 |
30,000,686 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9322:Zer1
|
UTSW |
2 |
30,000,923 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9577:Zer1
|
UTSW |
2 |
29,991,050 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9733:Zer1
|
UTSW |
2 |
29,997,643 (GRCm39) |
missense |
probably benign |
0.00 |
|
X0026:Zer1
|
UTSW |
2 |
29,994,907 (GRCm39) |
missense |
probably damaging |
0.99 |
|
| Predicted Primers |
PCR Primer
(F):5'- TCGCAGTTGGTCAGGTAGAG -3'
(R):5'- AGTCAGAGTCTAAGCAGATGC -3'
Sequencing Primer
(F):5'- AGTTGGTCAGGTAGAGCTCCAC -3'
(R):5'- CTGTGAAGAGAGGTGACAGTTGC -3'
|
| Posted On |
2022-03-25 |
Incidental Mutation