Incidental Mutation 'R6888:Pals2'
ID 537041
Institutional Source Beutler Lab
Gene Symbol Pals2
Ensembl Gene ENSMUSG00000038388
Gene Name protein associated with LIN7 2, MAGUK family member
Synonyms P55t, Pals2, Mpp6
MMRRC Submission 044982-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R6888 (G1)
Quality Score 225.009
Status Not validated
Chromosome 6
Chromosomal Location 50087221-50175919 bp(+) (GRCm39)
Type of Mutation critical splice donor site (2 bp from exon)
DNA Base Change (assembly) T to G at 50157257 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000144737 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000036225] [ENSMUST00000036236] [ENSMUST00000166318] [ENSMUST00000167628] [ENSMUST00000204545]
AlphaFold Q9JLB0
Predicted Effect probably null
Transcript: ENSMUST00000036225
SMART Domains Protein: ENSMUSP00000038772
Gene: ENSMUSG00000038388

DomainStartEndE-ValueType
L27 1 55 1.08e-9 SMART
L27 56 110 7.05e-14 SMART
PDZ 138 208 1.45e-11 SMART
SH3 231 296 7.52e-12 SMART
GuKc 350 541 8.92e-72 SMART
Predicted Effect probably null
Transcript: ENSMUST00000036236
SMART Domains Protein: ENSMUSP00000039314
Gene: ENSMUSG00000038388

DomainStartEndE-ValueType
L27 1 55 1.08e-9 SMART
L27 56 110 7.05e-14 SMART
PDZ 138 208 1.45e-11 SMART
SH3 217 282 7.52e-12 SMART
GuKc 336 527 8.92e-72 SMART
Predicted Effect probably null
Transcript: ENSMUST00000166318
SMART Domains Protein: ENSMUSP00000125880
Gene: ENSMUSG00000038388

DomainStartEndE-ValueType
L27 1 55 1.08e-9 SMART
L27 56 110 7.05e-14 SMART
PDZ 138 208 1.45e-11 SMART
SH3 231 296 7.52e-12 SMART
GuKc 350 541 8.92e-72 SMART
Predicted Effect probably null
Transcript: ENSMUST00000167628
SMART Domains Protein: ENSMUSP00000129355
Gene: ENSMUSG00000038388

DomainStartEndE-ValueType
L27 1 55 1.08e-9 SMART
L27 56 110 7.05e-14 SMART
PDZ 138 208 1.45e-11 SMART
SH3 231 296 7.52e-12 SMART
Predicted Effect probably null
Transcript: ENSMUST00000204545
SMART Domains Protein: ENSMUSP00000144737
Gene: ENSMUSG00000038388

DomainStartEndE-ValueType
L27 1 55 1.08e-9 SMART
L27 56 110 7.05e-14 SMART
PDZ 138 208 1.45e-11 SMART
SH3 217 282 7.52e-12 SMART
GuKc 336 527 8.92e-72 SMART
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.4%
  • 20x: 98.1%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Members of the peripheral membrane-associated guanylate kinase (MAGUK) family function in tumor suppression and receptor clustering by forming multiprotein complexes containing distinct sets of transmembrane, cytoskeletal, and cytoplasmic signaling proteins. All MAGUKs contain a PDZ-SH3-GUK core and are divided into 4 subfamilies, DLG-like (see DLG1; MIM 601014), ZO1-like (see TJP1; MIM 601009), p55-like (see MPP1; MIM 305360), and LIN2-like (see CASK; MIM 300172), based on their size and the presence of additional domains. MPP6 is a member of the p55-like MAGUK subfamily (Tseng et al., 2001 [PubMed 11311936]).[supplied by OMIM, Mar 2008]
Allele List at MGI
Other mutations in this stock
Total: 62 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Actg1 T C 11: 120,238,141 (GRCm39) Y190C probably damaging Het
Adgrv1 A G 13: 81,656,788 (GRCm39) I2902T probably damaging Het
AI429214 G A 8: 37,460,987 (GRCm39) G45D possibly damaging Het
Ambra1 A G 2: 91,599,372 (GRCm39) D164G probably damaging Het
Ap3b1 A T 13: 94,545,299 (GRCm39) Q184L probably benign Het
Arhgef17 T C 7: 100,580,027 (GRCm39) D307G possibly damaging Het
AY761185 A T 8: 21,434,571 (GRCm39) Y52* probably null Het
Bfsp1 A G 2: 143,668,639 (GRCm39) S647P probably benign Het
C130073F10Rik A G 4: 101,747,453 (GRCm39) V192A probably benign Het
Cacna1g T A 11: 94,350,033 (GRCm39) D604V probably benign Het
Ccdc170 T C 10: 4,496,854 (GRCm39) V458A possibly damaging Het
Ccdc187 G A 2: 26,179,746 (GRCm39) R238W probably damaging Het
Cdh1 A G 8: 107,384,946 (GRCm39) S380G probably benign Het
Cdk5rap3 T C 11: 96,807,018 (GRCm39) H4R probably benign Het
Cftr G A 6: 18,313,729 (GRCm39) probably null Het
Cstpp1 A G 2: 91,252,239 (GRCm39) Y41H probably damaging Het
Dnajc16 A G 4: 141,504,303 (GRCm39) V219A probably benign Het
Drd3 A T 16: 43,637,502 (GRCm39) I266F probably benign Het
Dut A G 2: 125,099,044 (GRCm39) D177G probably benign Het
Esr1 A G 10: 4,807,076 (GRCm39) I331V probably benign Het
Gm11110 A G 17: 57,409,143 (GRCm39) probably benign Het
Grm7 G T 6: 111,335,314 (GRCm39) G575V possibly damaging Het
Heatr3 A G 8: 88,897,512 (GRCm39) Y531C probably damaging Het
Igfn1 A G 1: 135,910,218 (GRCm39) V122A probably benign Het
Igsf21 T C 4: 139,762,054 (GRCm39) D208G probably benign Het
Kntc1 T C 5: 123,949,373 (GRCm39) Y1915H probably damaging Het
Lamc1 A T 1: 153,138,238 (GRCm39) D205E probably damaging Het
Limch1 C T 5: 67,179,269 (GRCm39) T713I probably benign Het
Lrp1b A G 2: 41,361,138 (GRCm39) I555T probably benign Het
Lrp2 A T 2: 69,354,485 (GRCm39) F448I probably damaging Het
Marchf6 T C 15: 31,459,379 (GRCm39) K896E probably benign Het
Mroh4 T C 15: 74,485,098 (GRCm39) Y469C possibly damaging Het
Niban3 G T 8: 72,056,383 (GRCm39) R361L probably benign Het
Nos3 T C 5: 24,588,333 (GRCm39) V1060A possibly damaging Het
Nr1h4 A G 10: 89,292,404 (GRCm39) I406T probably damaging Het
Odf2l T C 3: 144,854,379 (GRCm39) probably null Het
Or2y15 A T 11: 49,351,087 (GRCm39) T194S probably damaging Het
Or5d14 A G 2: 87,880,608 (GRCm39) M120T probably damaging Het
Pbx2 A G 17: 34,813,081 (GRCm39) Y119C possibly damaging Het
Pdcd6ip C A 9: 113,500,905 (GRCm39) A526S probably benign Het
Prx G A 7: 27,219,059 (GRCm39) D1187N possibly damaging Het
Ptpro G A 6: 137,357,198 (GRCm39) V230I probably benign Het
Rtn3 C T 19: 7,434,614 (GRCm39) M440I probably benign Het
Sar1b T C 11: 51,679,019 (GRCm39) I96T probably damaging Het
Sds T C 5: 120,618,965 (GRCm39) probably null Het
Secisbp2 A G 13: 51,833,977 (GRCm39) T706A probably benign Het
Sorcs3 A T 19: 48,682,263 (GRCm39) M433L possibly damaging Het
Sppl2a A G 2: 126,746,912 (GRCm39) V472A probably damaging Het
Tbc1d9 A G 8: 83,998,217 (GRCm39) E1258G possibly damaging Het
Tbxas1 C A 6: 38,929,008 (GRCm39) probably benign Het
Tg T C 15: 66,568,095 (GRCm39) I1333T probably damaging Het
Tmem108 C T 9: 103,376,915 (GRCm39) G178D probably damaging Het
Tmem174 A G 13: 98,773,569 (GRCm39) L87P probably damaging Het
Tmppe T A 9: 114,233,769 (GRCm39) S23T probably damaging Het
Ttn G A 2: 76,591,447 (GRCm39) T21074I probably benign Het
Tub A G 7: 108,628,505 (GRCm39) M338V probably null Het
Vmn1r160 A T 7: 22,571,531 (GRCm39) R295* probably null Het
Vps52 T C 17: 34,182,180 (GRCm39) V518A probably benign Het
Wdr59 A G 8: 112,177,675 (GRCm39) V909A probably benign Het
Wnk1 T C 6: 119,925,742 (GRCm39) T1241A probably benign Het
Zfp882 G A 8: 72,668,130 (GRCm39) C319Y probably benign Het
Znfx1 A T 2: 166,880,860 (GRCm39) I308N possibly damaging Het
Other mutations in Pals2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00809:Pals2 APN 6 50,173,569 (GRCm39) missense probably benign 0.26
IGL00944:Pals2 APN 6 50,140,436 (GRCm39) missense possibly damaging 0.96
IGL01576:Pals2 APN 6 50,140,472 (GRCm39) missense probably benign 0.02
IGL01639:Pals2 APN 6 50,155,460 (GRCm39) missense probably damaging 0.99
IGL02541:Pals2 APN 6 50,160,707 (GRCm39) missense probably benign 0.40
IGL02668:Pals2 APN 6 50,171,509 (GRCm39) missense probably damaging 1.00
R1033:Pals2 UTSW 6 50,160,716 (GRCm39) missense probably damaging 1.00
R1066:Pals2 UTSW 6 50,122,847 (GRCm39) missense possibly damaging 0.94
R1542:Pals2 UTSW 6 50,175,306 (GRCm39) missense probably damaging 1.00
R1799:Pals2 UTSW 6 50,173,525 (GRCm39) missense probably damaging 0.97
R1817:Pals2 UTSW 6 50,140,411 (GRCm39) missense probably benign 0.06
R1818:Pals2 UTSW 6 50,140,411 (GRCm39) missense probably benign 0.06
R4410:Pals2 UTSW 6 50,175,248 (GRCm39) nonsense probably null
R5162:Pals2 UTSW 6 50,155,495 (GRCm39) missense probably damaging 1.00
R5591:Pals2 UTSW 6 50,157,159 (GRCm39) missense probably benign 0.11
R6182:Pals2 UTSW 6 50,175,206 (GRCm39) missense probably benign
R6500:Pals2 UTSW 6 50,175,146 (GRCm39) missense possibly damaging 0.67
R6762:Pals2 UTSW 6 50,157,418 (GRCm39) splice site probably null
R6963:Pals2 UTSW 6 50,140,635 (GRCm39) splice site probably null
R7002:Pals2 UTSW 6 50,139,642 (GRCm39) missense probably benign
R7629:Pals2 UTSW 6 50,173,603 (GRCm39) missense probably benign 0.07
R8159:Pals2 UTSW 6 50,171,527 (GRCm39) missense probably benign 0.00
R9190:Pals2 UTSW 6 50,157,219 (GRCm39) missense probably damaging 1.00
R9266:Pals2 UTSW 6 50,140,463 (GRCm39) missense probably benign 0.07
R9604:Pals2 UTSW 6 50,173,597 (GRCm39) missense probably benign 0.11
X0027:Pals2 UTSW 6 50,140,511 (GRCm39) missense probably benign 0.42
Predicted Primers PCR Primer
(F):5'- TAACTTCAACTGACCAGCACTTG -3'
(R):5'- TCCTAGGAGGGGTGAATTTGTCAC -3'

Sequencing Primer
(F):5'- GTGCTGGTCTGATTCCAA -3'
(R):5'- GTCACTGGATTTTGATACACTACCAG -3'
Posted On 2018-10-18