Mutagenetix > Incidental Mutation

Incidental Mutation 'R7689:Cspg4b'

593294

Institutional Source

Beutler Lab

Gene Symbol

Cspg4b

Ensembl Gene

ENSMUSG00000021763

Gene Name

chondroitin sulfate proteoglycan 4B

Synonyms

BC067074

MMRRC Submission

045753-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.201) question?

Stock #

R7689 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

113429570-113507049 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 113515948 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 121 (T121A)

Gene Model

predicted gene model for transcript(s):

AlphaFold

F6RXI4

Predicted Effect

SMART Domains

Protein: ENSMUSP00000131959
Gene: ENSMUSG00000021763
AA Change: T121A

Domain	Start	End	E-Value	Type
Pfam:Cadherin_3	1	86	1.1e-9	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.2%

Validation Efficiency

Allele List at MGI

All alleles(2) : Targeted(2)

Other mutations in this stock

Total: 77 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2510039O18Rik	T	A	4: 148,029,440 (GRCm39)	F470Y	probably damaging	Het
Adra1a	T	C	14: 66,875,250 (GRCm39)	L75P	probably damaging	Het
Agap1	T	C	1: 89,762,188 (GRCm39)	S560P	probably damaging	Het
Ahcyl	T	C	16: 45,974,970 (GRCm39)	T136A	probably benign	Het
Arrdc4	T	A	7: 68,391,623 (GRCm39)	I215L	probably damaging	Het
Atad3a	C	T	4: 155,840,610 (GRCm39)	A97T	probably damaging	Het
Bcas3	A	T	11: 85,386,713 (GRCm39)	T383S	probably benign	Het
C2cd5	G	A	6: 142,995,951 (GRCm39)	R379*	probably null	Het
Cacna1e	G	T	1: 154,274,549 (GRCm39)	H2138N	probably benign	Het
Card14	A	T	11: 119,216,328 (GRCm39)	D303V	possibly damaging	Het
Ccdc202	T	C	14: 96,119,252 (GRCm39)	V3A	probably benign	Het
Cfhr1	T	C	1: 139,475,478 (GRCm39)	Y331C	unknown	Het
Chp1	G	A	2: 119,415,146 (GRCm39)	D183N	probably benign	Het
Cntn2	T	C	1: 132,443,882 (GRCm39)	T966A	probably benign	Het
Cpne9	T	G	6: 113,266,965 (GRCm39)	C133G	probably damaging	Het
Cul7	C	T	17: 46,963,747 (GRCm39)	Q275*	probably null	Het
Cyp11b1	T	C	15: 74,710,897 (GRCm39)	D221G	probably benign	Het
Dmxl1	T	A	18: 49,979,685 (GRCm39)	F107I	probably benign	Het
Dnhd1	A	G	7: 105,363,170 (GRCm39)	I3911V	probably benign	Het
Eif1ad16	A	G	12: 87,985,259 (GRCm39)	Y95H	probably damaging	Het
Eloa	T	C	4: 135,736,595 (GRCm39)	H551R	probably benign	Het
Fam171b	T	A	2: 83,709,732 (GRCm39)	V468D	probably benign	Het
Fat2	A	G	11: 55,200,666 (GRCm39)	W803R	probably damaging	Het
Fbxo43	T	C	15: 36,163,201 (GRCm39)	D2G	probably benign	Het
Fbxo8	A	G	8: 57,041,120 (GRCm39)	T179A	probably benign	Het
Gdap1	A	G	1: 17,231,623 (GRCm39)	T323A	probably damaging	Het
Gm136	T	C	4: 34,743,875 (GRCm39)	N323S	probably null	Het
Gm6899	A	T	11: 26,543,819 (GRCm39)	T129S	unknown	Het
Gnb3	A	T	6: 124,814,183 (GRCm39)	C166S	possibly damaging	Het
Gpr61	A	G	3: 108,057,966 (GRCm39)	F232L	probably damaging	Het
Gpx8	T	C	13: 113,179,711 (GRCm39)	M197V	probably benign	Het
Gse1	G	T	8: 121,295,217 (GRCm39)	R446L	unknown	Het
Itch	A	T	2: 155,054,987 (GRCm39)	T764S	probably benign	Het
Itch	A	G	2: 155,051,922 (GRCm39)	K614E	probably damaging	Het
Itpkb	T	G	1: 180,241,544 (GRCm39)	M738R	probably damaging	Het
Jph1	T	A	1: 17,074,192 (GRCm39)	K609*	probably null	Het
Kcns1	G	A	2: 164,010,241 (GRCm39)	R173C	probably damaging	Het
Larp4b	C	T	13: 9,186,834 (GRCm39)	S54L	probably damaging	Het
Lonrf1	G	T	8: 36,715,918 (GRCm39)	S239*	probably null	Het
Lyst	T	G	13: 13,857,808 (GRCm39)		probably null	Het
Mccc1	T	A	3: 36,015,132 (GRCm39)	R663*	probably null	Het
Mcm3	A	G	1: 20,876,997 (GRCm39)	V646A	probably benign	Het
Mdn1	T	C	4: 32,739,912 (GRCm39)	L3722P	probably damaging	Het
Mmp27	T	G	9: 7,579,002 (GRCm39)	D392E	probably damaging	Het
Ms4a14	A	G	19: 11,279,906 (GRCm39)	I884T	probably benign	Het
Muc4	C	T	16: 32,574,439 (GRCm39)	T963I	probably benign	Het
Muc6	G	C	7: 141,217,659 (GRCm39)	P2338R	probably damaging	Het
Mucl3	C	A	17: 35,948,969 (GRCm39)	S210I	possibly damaging	Het
Nbeal1	G	C	1: 60,276,310 (GRCm39)	V684L	probably benign	Het
Ndrg2	C	T	14: 52,147,812 (GRCm39)	A102T	possibly damaging	Het
Nhsl3	T	C	4: 129,117,566 (GRCm39)	N411S	probably benign	Het
Nos1	A	G	5: 118,035,792 (GRCm39)	D431G	probably damaging	Het
Oog4	CAA	CA	4: 143,164,022 (GRCm39)		probably null	Het
Otog	T	C	7: 45,901,480 (GRCm39)	L393P	probably damaging	Het
Plcl1	A	G	1: 55,736,627 (GRCm39)	N656S	probably damaging	Het
Pole3	C	A	4: 62,443,060 (GRCm39)	V27F	probably damaging	Het
Prrt4	T	A	6: 29,177,140 (GRCm39)	I210F	probably damaging	Het
Ptpn18	G	A	1: 34,512,445 (GRCm39)	D417N	possibly damaging	Het
Rbpms	A	T	8: 34,354,387 (GRCm39)	S53T	possibly damaging	Het
Rgs7	C	A	1: 174,949,296 (GRCm39)	V203L	probably benign	Het
Riok1	A	T	13: 38,229,263 (GRCm39)	D150V	probably damaging	Het
Rrp1b	T	C	17: 32,274,900 (GRCm39)	L335P	probably benign	Het
Rsph6a	T	G	7: 18,801,962 (GRCm39)	I592S	possibly damaging	Het
Skor1	C	T	9: 63,052,661 (GRCm39)	G436D	probably damaging	Het
Slc17a8	T	C	10: 89,433,319 (GRCm39)	T51A	possibly damaging	Het
Slc22a8	T	C	19: 8,585,248 (GRCm39)	S266P	probably damaging	Het
Socs2	A	G	10: 95,250,845 (GRCm39)		probably benign	Het
Tas2r106	A	G	6: 131,655,668 (GRCm39)	I61T	possibly damaging	Het
Tfap2a	T	C	13: 40,882,051 (GRCm39)	N77D	probably damaging	Het
Tmem236	T	A	2: 14,197,076 (GRCm39)	L88Q	probably damaging	Het
Ttc41	A	G	10: 86,595,088 (GRCm39)	E954G	probably damaging	Het
Vmn1r34	G	T	6: 66,613,994 (GRCm39)	S248*	probably null	Het
Wipf1	T	C	2: 73,262,789 (GRCm39)	R483G	probably damaging	Het
Zfhx4	A	G	3: 5,476,946 (GRCm39)	N3187S	probably benign	Het
Zfp202	C	A	9: 40,121,829 (GRCm39)	P309T	probably benign	Het
Zfp39	T	C	11: 58,781,469 (GRCm39)	H431R	probably damaging	Het
Zfp658	T	A	7: 43,224,102 (GRCm39)	H792Q	probably benign	Het

Other mutations in Cspg4b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01723:Cspg4b	APN	13	113,504,091 (GRCm39)	missense	possibly damaging	0.91
IGL03023:Cspg4b	APN	13	113,488,275 (GRCm39)	missense	probably benign	0.03
cumpleanos	UTSW	13	113,504,870 (GRCm39)	missense	possibly damaging	0.87
Sorpresa	UTSW	13	113,454,725 (GRCm39)	missense	probably damaging	1.00
P0018:Cspg4b	UTSW	13	113,504,040 (GRCm39)	missense	possibly damaging	0.60
R0003:Cspg4b	UTSW	13	113,505,310 (GRCm39)	missense	probably benign	0.00
R0016:Cspg4b	UTSW	13	113,502,639 (GRCm39)	missense	probably damaging	1.00
R0016:Cspg4b	UTSW	13	113,502,639 (GRCm39)	missense	probably damaging	1.00
R0053:Cspg4b	UTSW	13	113,505,023 (GRCm39)	missense	probably benign	0.00
R0053:Cspg4b	UTSW	13	113,505,023 (GRCm39)	missense	probably benign	0.00
R0158:Cspg4b	UTSW	13	113,505,687 (GRCm39)	nonsense	probably null
R0281:Cspg4b	UTSW	13	113,505,677 (GRCm39)	missense	probably damaging	1.00
R1212:Cspg4b	UTSW	13	113,505,951 (GRCm39)	intron	probably benign
R1300:Cspg4b	UTSW	13	113,502,694 (GRCm39)	missense	probably damaging	1.00
R1434:Cspg4b	UTSW	13	113,505,026 (GRCm39)	missense	possibly damaging	0.46
R1509:Cspg4b	UTSW	13	113,504,790 (GRCm39)	missense	probably damaging	0.99
R1738:Cspg4b	UTSW	13	113,504,034 (GRCm39)	missense	possibly damaging	0.69
R1758:Cspg4b	UTSW	13	113,505,266 (GRCm39)	missense	possibly damaging	0.78
R1828:Cspg4b	UTSW	13	113,505,342 (GRCm39)	missense	probably damaging	1.00
R2061:Cspg4b	UTSW	13	113,454,628 (GRCm39)	missense	probably damaging	0.99
R2570:Cspg4b	UTSW	13	113,455,121 (GRCm39)	missense	probably benign	0.34
R2884:Cspg4b	UTSW	13	113,457,216 (GRCm39)	missense	probably damaging	1.00
R2884:Cspg4b	UTSW	13	113,505,725 (GRCm39)	missense	probably benign	0.00
R3004:Cspg4b	UTSW	13	113,502,688 (GRCm39)	missense	probably damaging	1.00
R3150:Cspg4b	UTSW	13	113,488,294 (GRCm39)	missense	probably damaging	1.00
R3773:Cspg4b	UTSW	13	113,454,743 (GRCm39)	missense	probably benign	0.12
R3864:Cspg4b	UTSW	13	113,459,485 (GRCm39)	missense	possibly damaging	0.64
R3971:Cspg4b	UTSW	13	113,453,660 (GRCm39)	missense	probably damaging	1.00
R4004:Cspg4b	UTSW	13	113,454,914 (GRCm39)	missense	probably benign	0.00
R4271:Cspg4b	UTSW	13	113,478,904 (GRCm39)	missense	possibly damaging	0.76
R4382:Cspg4b	UTSW	13	113,459,288 (GRCm39)	missense	probably benign	0.10
R4484:Cspg4b	UTSW	13	113,455,733 (GRCm39)	missense	probably damaging	0.98
R4570:Cspg4b	UTSW	13	113,454,725 (GRCm39)	missense	probably damaging	1.00
R4600:Cspg4b	UTSW	13	113,455,783 (GRCm39)	missense	possibly damaging	0.95
R4622:Cspg4b	UTSW	13	113,456,615 (GRCm39)	missense	probably benign	0.00
R4676:Cspg4b	UTSW	13	113,505,342 (GRCm39)	missense	probably damaging	1.00
R4676:Cspg4b	UTSW	13	113,505,341 (GRCm39)	missense	probably damaging	0.98
R4677:Cspg4b	UTSW	13	113,516,020 (GRCm39)	missense	unknown
R4775:Cspg4b	UTSW	13	113,454,229 (GRCm39)	missense	possibly damaging	0.91
R4779:Cspg4b	UTSW	13	113,504,870 (GRCm39)	missense	possibly damaging	0.87
R4780:Cspg4b	UTSW	13	113,454,392 (GRCm39)	missense	probably damaging	1.00
R4829:Cspg4b	UTSW	13	113,504,696 (GRCm39)	missense	probably benign	0.05
R4841:Cspg4b	UTSW	13	113,502,724 (GRCm39)	missense	probably benign	0.00
R4879:Cspg4b	UTSW	13	113,456,321 (GRCm39)	missense	probably benign	0.03
R4930:Cspg4b	UTSW	13	113,464,196 (GRCm39)	missense	probably damaging	1.00
R4934:Cspg4b	UTSW	13	113,504,882 (GRCm39)	missense	probably damaging	1.00
R4987:Cspg4b	UTSW	13	113,454,635 (GRCm39)	missense	probably benign	0.07
R5065:Cspg4b	UTSW	13	113,457,453 (GRCm39)	missense	probably benign	0.01
R5216:Cspg4b	UTSW	13	113,478,947 (GRCm39)	missense	probably benign	0.20
R5236:Cspg4b	UTSW	13	113,502,754 (GRCm39)	missense	probably benign	0.14
R5247:Cspg4b	UTSW	13	113,455,993 (GRCm39)	missense	probably damaging	1.00
R5250:Cspg4b	UTSW	13	113,456,305 (GRCm39)	missense	possibly damaging	0.95
R5337:Cspg4b	UTSW	13	113,455,299 (GRCm39)	missense	probably damaging	1.00
R5342:Cspg4b	UTSW	13	113,502,803 (GRCm39)	critical splice donor site	probably null
R5426:Cspg4b	UTSW	13	113,505,587 (GRCm39)	missense	probably benign	0.01
R5472:Cspg4b	UTSW	13	113,455,703 (GRCm39)	missense	probably benign	0.12
R5526:Cspg4b	UTSW	13	113,504,427 (GRCm39)	missense	probably benign	0.22
R5543:Cspg4b	UTSW	13	113,457,407 (GRCm39)	missense	probably damaging	0.96
R5589:Cspg4b	UTSW	13	113,454,484 (GRCm39)	missense	possibly damaging	0.95
R5623:Cspg4b	UTSW	13	113,483,168 (GRCm39)	missense	possibly damaging	0.95
R5668:Cspg4b	UTSW	13	113,453,701 (GRCm39)	missense	possibly damaging	0.55
R5793:Cspg4b	UTSW	13	113,457,556 (GRCm39)	missense	possibly damaging	0.75
R5824:Cspg4b	UTSW	13	113,505,154 (GRCm39)	missense	probably damaging	1.00
R6038:Cspg4b	UTSW	13	113,455,153 (GRCm39)	missense	possibly damaging	0.49
R6038:Cspg4b	UTSW	13	113,455,153 (GRCm39)	missense	possibly damaging	0.49
R6053:Cspg4b	UTSW	13	113,457,260 (GRCm39)	missense	possibly damaging	0.51
R6125:Cspg4b	UTSW	13	113,454,217 (GRCm39)	missense	probably benign	0.00
R6129:Cspg4b	UTSW	13	113,505,340 (GRCm39)	nonsense	probably null
R6290:Cspg4b	UTSW	13	113,456,492 (GRCm39)	missense	probably damaging	0.97
R6291:Cspg4b	UTSW	13	113,456,981 (GRCm39)	missense	possibly damaging	0.85
R6302:Cspg4b	UTSW	13	113,504,646 (GRCm39)	missense	probably damaging	1.00
R6317:Cspg4b	UTSW	13	113,504,802 (GRCm39)	missense	probably benign	0.09
R6395:Cspg4b	UTSW	13	113,506,003 (GRCm39)	missense	probably damaging	1.00
R6673:Cspg4b	UTSW	13	113,504,366 (GRCm39)	nonsense	probably null
R6783:Cspg4b	UTSW	13	113,456,743 (GRCm39)	nonsense	probably null
R6800:Cspg4b	UTSW	13	113,504,686 (GRCm39)	missense	probably benign	0.02
R6857:Cspg4b	UTSW	13	113,456,492 (GRCm39)	missense	probably damaging	0.97
R6889:Cspg4b	UTSW	13	113,454,912 (GRCm39)	missense	probably damaging	0.99
R6934:Cspg4b	UTSW	13	113,505,800 (GRCm39)	missense	probably benign
R7019:Cspg4b	UTSW	13	113,488,284 (GRCm39)	missense	probably benign	0.01
R7100:Cspg4b	UTSW	13	113,455,501 (GRCm39)	missense
R7115:Cspg4b	UTSW	13	113,457,310 (GRCm39)	missense
R7152:Cspg4b	UTSW	13	113,455,384 (GRCm39)	missense
R7195:Cspg4b	UTSW	13	113,504,463 (GRCm39)	missense
R7213:Cspg4b	UTSW	13	113,454,475 (GRCm39)	missense
R7250:Cspg4b	UTSW	13	113,455,349 (GRCm39)	missense
R7341:Cspg4b	UTSW	13	113,454,706 (GRCm39)	missense
R7358:Cspg4b	UTSW	13	113,456,501 (GRCm39)	missense
R7359:Cspg4b	UTSW	13	113,478,964 (GRCm39)	missense
R7396:Cspg4b	UTSW	13	113,455,524 (GRCm39)	missense
R7632:Cspg4b	UTSW	13	113,457,420 (GRCm39)	missense
R7713:Cspg4b	UTSW	13	113,483,075 (GRCm39)	missense
R7892:Cspg4b	UTSW	13	113,456,140 (GRCm39)	missense
R7975:Cspg4b	UTSW	13	113,455,841 (GRCm39)	missense
R8017:Cspg4b	UTSW	13	113,456,157 (GRCm39)	missense
R8019:Cspg4b	UTSW	13	113,456,157 (GRCm39)	missense
R8034:Cspg4b	UTSW	13	113,479,045 (GRCm39)	missense
R8101:Cspg4b	UTSW	13	113,457,425 (GRCm39)	missense
R8104:Cspg4b	UTSW	13	113,456,263 (GRCm39)	missense
R8122:Cspg4b	UTSW	13	113,455,442 (GRCm39)	missense
R8126:Cspg4b	UTSW	13	113,504,697 (GRCm39)	missense
R8272:Cspg4b	UTSW	13	113,504,889 (GRCm39)	missense
R8679:Cspg4b	UTSW	13	113,488,163 (GRCm39)	missense
R8973:Cspg4b	UTSW	13	113,456,293 (GRCm39)	missense
R9123:Cspg4b	UTSW	13	113,505,374 (GRCm39)	missense
R9125:Cspg4b	UTSW	13	113,505,374 (GRCm39)	missense
R9182:Cspg4b	UTSW	13	113,457,358 (GRCm39)	missense
R9233:Cspg4b	UTSW	13	113,502,754 (GRCm39)	missense
R9264:Cspg4b	UTSW	13	113,456,014 (GRCm39)	missense
R9306:Cspg4b	UTSW	13	113,506,010 (GRCm39)	missense	unknown
R9327:Cspg4b	UTSW	13	113,453,710 (GRCm39)	missense
R9411:Cspg4b	UTSW	13	113,504,767 (GRCm39)	missense
R9516:Cspg4b	UTSW	13	113,455,649 (GRCm39)	missense
R9562:Cspg4b	UTSW	13	113,504,574 (GRCm39)	missense
R9605:Cspg4b	UTSW	13	113,456,503 (GRCm39)	missense

Predicted Primers

PCR Primer
(F):5'- TCTGATCCAGTCCATTGCAAGC -3'
(R):5'- AGCAAGGCCACAAGGTATTG -3'

Sequencing Primer
(F):5'- AGTCCATTGCAAGCAGCCG -3'
(R):5'- AGATGGACTCTGGGCTTCTAGAC -3'

Posted On

2019-11-12