Mutagenetix > Incidental Mutation

Incidental Mutation 'R9360:Zfp563'

708662

Institutional Source

Beutler Lab

Gene Symbol

Zfp563

Ensembl Gene

ENSMUSG00000067424

Gene Name

zinc finger protein 563

Synonyms

zinc finger protein, Zfp413

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.059) question?

Stock #

R9360 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

33308284-33329679 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 33324428 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 341 (E341G)

Ref Sequence

ENSEMBL: ENSMUSP00000118809 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000131722] [ENSMUST00000140829]

AlphaFold

B8JJZ9

Predicted Effect

probably benign
Transcript: ENSMUST00000131722
AA Change: E341G

PolyPhen 2 Score 0.377 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000118809
Gene: ENSMUSG00000067424
AA Change: E341G

Domain	Start	End	E-Value	Type
KRAB	4	61	5.45e-16	SMART
ZnF_C2H2	141	163	2.63e2	SMART
ZnF_C2H2	169	191	9.08e-4	SMART
ZnF_C2H2	197	219	9.88e-5	SMART
ZnF_C2H2	225	247	3.16e-3	SMART
ZnF_C2H2	253	275	5.81e-2	SMART
ZnF_C2H2	281	303	2.4e-3	SMART
ZnF_C2H2	309	331	1.82e-3	SMART
ZnF_C2H2	337	359	1.72e-4	SMART
ZnF_C2H2	365	387	4.54e-4	SMART
ZnF_C2H2	393	415	7.78e-3	SMART
ZnF_C2H2	421	443	3.63e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000140829

SMART Domains

Protein: ENSMUSP00000121678
Gene: ENSMUSG00000067424

Domain	Start	End	E-Value	Type
KRAB	4	61	5.45e-16	SMART
ZnF_C2H2	141	163	2.63e2	SMART
ZnF_C2H2	169	191	9.08e-4	SMART
Pfam:zf-C2H2_4	197	209	9.4e-2	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000153072

SMART Domains

Protein: ENSMUSP00000119142
Gene: ENSMUSG00000067424

Domain	Start	End	E-Value	Type
low complexity region	30	41	N/A	INTRINSIC
KRAB	45	102	5.45e-16	SMART

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.5%
20x: 98.1%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 60 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adam4	A	G	12: 81,468,261 (GRCm39)	L120P	probably damaging	Het
Asb6	A	G	2: 30,714,334 (GRCm39)	S259P	probably damaging	Het
Atp6v0a2	C	A	5: 124,767,259 (GRCm39)	S7R	possibly damaging	Het
Btbd16	C	T	7: 130,417,516 (GRCm39)	R344C	probably damaging	Het
Cacna1h	G	A	17: 25,594,336 (GRCm39)	A2274V	probably benign	Het
Caml	A	C	13: 55,771,030 (GRCm39)	N43H	probably damaging	Het
Ccar2	A	G	14: 70,379,445 (GRCm39)	S518P	probably damaging	Het
Cdkl3	A	G	11: 51,924,349 (GRCm39)	I546V	probably null	Het
Chac1	C	T	2: 119,182,854 (GRCm39)	T84I	probably damaging	Het
Col6a6	T	C	9: 105,644,686 (GRCm39)	T1201A	probably benign	Het
Csf1	T	C	3: 107,661,158 (GRCm39)	T120A	possibly damaging	Het
Ctsj	T	A	13: 61,151,634 (GRCm39)	I95F	probably benign	Het
Cyp4f17	C	T	17: 32,743,880 (GRCm39)	R353C	probably benign	Het
Depdc1a	A	G	3: 159,232,168 (GRCm39)	M640V	possibly damaging	Het
Dgkq	A	G	5: 108,798,469 (GRCm39)	V633A	probably damaging	Het
Fdft1	A	T	14: 63,415,189 (GRCm39)	Y14*	probably null	Het
Fktn	G	A	4: 53,734,854 (GRCm39)	G125D	probably benign	Het
Ftdc1	T	C	16: 58,434,234 (GRCm39)	D161G	probably benign	Het
Gfm2	T	A	13: 97,289,752 (GRCm39)	V179E	probably damaging	Het
Gpr12	A	G	5: 146,520,299 (GRCm39)	F208L	probably benign	Het
Greb1	A	G	12: 16,790,037 (GRCm39)	S4P	probably damaging	Het
Hlcs	A	T	16: 93,932,672 (GRCm39)	I717N	probably damaging	Het
Hormad1	G	A	3: 95,483,622 (GRCm39)	A145T	probably benign	Het
Kcmf1	A	T	6: 72,838,826 (GRCm39)	C33*	probably null	Het
Kif13a	A	T	13: 46,962,472 (GRCm39)	S561T	probably benign	Het
Klhl20	G	T	1: 160,921,269 (GRCm39)	P571Q	probably benign	Het
Kpna6	A	T	4: 129,547,635 (GRCm39)	M304K	probably benign	Het
Krt75	T	C	15: 101,476,729 (GRCm39)	K387E	probably damaging	Het
Lum	A	T	10: 97,404,752 (GRCm39)	K216*	probably null	Het
Meioc	A	G	11: 102,565,779 (GRCm39)	N409S	probably benign	Het
Mrpl20	T	C	4: 155,888,402 (GRCm39)		probably null	Het
Naa16	A	T	14: 79,593,943 (GRCm39)	I374N	probably benign	Het
Nbea	A	G	3: 55,943,319 (GRCm39)	I652T	possibly damaging	Het
Nhsl1	G	A	10: 18,194,898 (GRCm39)	G56R	probably damaging	Het
Obscn	T	C	11: 58,973,650 (GRCm39)	I1894V	probably benign	Het
Olig2	A	C	16: 91,023,774 (GRCm39)	T163P	probably damaging	Het
Or13c7c	A	G	4: 43,835,765 (GRCm39)	S242P	probably benign	Het
Or4g7	T	C	2: 111,309,684 (GRCm39)	I185T	probably benign	Het
Or5p81	T	A	7: 108,266,977 (GRCm39)	L118Q	probably damaging	Het
Or7e168	T	A	9: 19,720,529 (GRCm39)	V305D	possibly damaging	Het
Parp4	G	A	14: 56,878,775 (GRCm39)		probably null	Het
Pcdhb2	T	C	18: 37,429,551 (GRCm39)	I508T	probably damaging	Het
Pcdhga8	T	C	18: 37,859,787 (GRCm39)	F281S	probably damaging	Het
Pom121l12	T	A	11: 14,549,516 (GRCm39)	M74K	possibly damaging	Het
Pramel39-ps	G	T	5: 94,451,001 (GRCm39)	P375H	probably damaging	Het
Prpf8	T	C	11: 75,381,156 (GRCm39)	Y219H	possibly damaging	Het
Rhag	T	C	17: 41,142,548 (GRCm39)	V251A	possibly damaging	Het
Rrs1	A	G	1: 9,616,845 (GRCm39)	*366W	probably null	Het
Sgpp2	A	G	1: 78,367,143 (GRCm39)	D92G	probably damaging	Het
Slc44a3	C	A	3: 121,325,908 (GRCm39)		probably benign	Het
Smg8	T	C	11: 86,968,956 (GRCm39)	M257V	probably benign	Het
Taar7e	T	A	10: 23,913,949 (GRCm39)	Y146*	probably null	Het
Tet2	G	T	3: 133,192,903 (GRCm39)	N510K	possibly damaging	Het
Tgfbr3	T	C	5: 107,257,550 (GRCm39)	I836M	unknown	Het
Thada	A	G	17: 84,499,410 (GRCm39)	V1929A	probably benign	Het
Tram1l1	A	T	3: 124,115,899 (GRCm39)	D353V	probably damaging	Het
Trf	T	A	9: 103,094,734 (GRCm39)		probably null	Het
Trim15	A	T	17: 37,177,942 (GRCm39)	C18S	probably damaging	Het
Vmn1r62	T	C	7: 5,678,952 (GRCm39)	I211T	probably damaging	Het
Zdhhc17	A	G	10: 110,783,165 (GRCm39)	V501A	probably benign	Het

Other mutations in Zfp563

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01629:Zfp563	APN	17	33,323,600 (GRCm39)	missense	probably damaging	1.00
IGL01981:Zfp563	APN	17	33,324,383 (GRCm39)	missense	probably benign	0.16
IGL02407:Zfp563	APN	17	33,323,795 (GRCm39)	missense	probably benign	0.00
IGL02662:Zfp563	APN	17	33,321,253 (GRCm39)	missense	probably damaging	1.00
IGL03220:Zfp563	APN	17	33,323,661 (GRCm39)	missense	probably benign	0.44
R0241:Zfp563	UTSW	17	33,323,659 (GRCm39)	missense	possibly damaging	0.61
R0241:Zfp563	UTSW	17	33,323,659 (GRCm39)	missense	possibly damaging	0.61
R0537:Zfp563	UTSW	17	33,323,659 (GRCm39)	missense	possibly damaging	0.61
R0552:Zfp563	UTSW	17	33,323,659 (GRCm39)	missense	possibly damaging	0.61
R1544:Zfp563	UTSW	17	33,324,187 (GRCm39)	missense	probably benign	0.01
R3763:Zfp563	UTSW	17	33,323,902 (GRCm39)	nonsense	probably null
R3979:Zfp563	UTSW	17	33,324,701 (GRCm39)	missense	probably benign	0.03
R4938:Zfp563	UTSW	17	33,324,683 (GRCm39)	missense	probably damaging	1.00
R5280:Zfp563	UTSW	17	33,323,812 (GRCm39)	missense	probably damaging	0.99
R5383:Zfp563	UTSW	17	33,323,681 (GRCm39)	missense	probably benign
R5485:Zfp563	UTSW	17	33,308,540 (GRCm39)	unclassified	probably benign
R5524:Zfp563	UTSW	17	33,321,515 (GRCm39)	critical splice acceptor site	probably null
R5567:Zfp563	UTSW	17	33,308,431 (GRCm39)	unclassified	probably benign
R5736:Zfp563	UTSW	17	33,323,960 (GRCm39)	missense	possibly damaging	0.91
R5758:Zfp563	UTSW	17	33,323,894 (GRCm39)	missense	probably damaging	1.00
R6034:Zfp563	UTSW	17	33,323,935 (GRCm39)	missense	probably damaging	0.96
R6034:Zfp563	UTSW	17	33,323,935 (GRCm39)	missense	probably damaging	0.96
R6532:Zfp563	UTSW	17	33,324,672 (GRCm39)	missense	probably benign	0.21
R9241:Zfp563	UTSW	17	33,321,520 (GRCm39)	missense	probably benign	0.10
R9410:Zfp563	UTSW	17	33,321,320 (GRCm39)	missense	probably damaging	1.00
R9453:Zfp563	UTSW	17	33,308,565 (GRCm39)	missense
RF007:Zfp563	UTSW	17	33,323,999 (GRCm39)	missense	probably benign
X0023:Zfp563	UTSW	17	33,324,695 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TCTTCTTCAAGTAAGGTTCGAAGA -3'
(R):5'- AGTCCTTCCCACATTTTATGCTTAG -3'

Sequencing Primer
(F):5'- TCGACGTCATGACAGGATTC -3'
(R):5'- CACACTGCTTACATATGTAGGGC -3'

Posted On

2022-04-18