Incidental Mutation 'R0730:Cntn4'
| ID |
67456 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Cntn4
|
| Ensembl Gene |
ENSMUSG00000064293 |
| Gene Name |
contactin 4 |
| Synonyms |
BIG-2A, Axcam |
| MMRRC Submission |
038911-MU
|
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.318)
|
| Stock # |
R0730 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
6 |
| Chromosomal Location |
105654621-106676271 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to C
at 106527447 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Lysine to Threonine
at position 443
(K443T)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000078385
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000079416]
[ENSMUST00000089208]
[ENSMUST00000113258]
[ENSMUST00000113260]
[ENSMUST00000113261]
[ENSMUST00000113264]
|
| AlphaFold |
Q69Z26 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000079416
AA Change: K443T
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000078385
Gene: ENSMUSG00000064293
AA Change: K443T
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
IGc2
|
41 |
107 |
2.32e-8 |
SMART |
|
IG
|
129 |
215 |
3.4e-6 |
SMART |
|
IGc2
|
238 |
302 |
8.76e-18 |
SMART |
|
IGc2
|
328 |
391 |
2.91e-14 |
SMART |
|
IGc2
|
420 |
484 |
1.58e-10 |
SMART |
|
IG
|
504 |
594 |
9.55e-10 |
SMART |
|
FN3
|
597 |
683 |
1.54e-11 |
SMART |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000089208
AA Change: K443T
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000086616
Gene: ENSMUSG00000064293
AA Change: K443T
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
IGc2
|
41 |
107 |
2.32e-8 |
SMART |
|
IG
|
129 |
215 |
3.4e-6 |
SMART |
|
IGc2
|
238 |
302 |
8.76e-18 |
SMART |
|
IGc2
|
328 |
391 |
2.91e-14 |
SMART |
|
IGc2
|
420 |
484 |
1.58e-10 |
SMART |
|
IG
|
504 |
594 |
9.55e-10 |
SMART |
|
FN3
|
597 |
683 |
1.54e-11 |
SMART |
|
FN3
|
700 |
786 |
8.39e0 |
SMART |
|
FN3
|
801 |
886 |
1.33e-6 |
SMART |
|
FN3
|
901 |
981 |
9.85e-1 |
SMART |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000113258
AA Change: K443T
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000108883
Gene: ENSMUSG00000064293
AA Change: K443T
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
IGc2
|
41 |
107 |
2.32e-8 |
SMART |
|
IG
|
129 |
215 |
3.4e-6 |
SMART |
|
IGc2
|
238 |
302 |
8.76e-18 |
SMART |
|
IGc2
|
328 |
391 |
2.91e-14 |
SMART |
|
IGc2
|
420 |
484 |
1.58e-10 |
SMART |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000113260
AA Change: K443T
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000108885
Gene: ENSMUSG00000064293
AA Change: K443T
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
IGc2
|
41 |
107 |
2.32e-8 |
SMART |
|
IG
|
129 |
215 |
3.4e-6 |
SMART |
|
IGc2
|
238 |
302 |
8.76e-18 |
SMART |
|
IGc2
|
328 |
391 |
2.91e-14 |
SMART |
|
IGc2
|
420 |
484 |
1.58e-10 |
SMART |
|
IG
|
504 |
594 |
9.55e-10 |
SMART |
|
FN3
|
597 |
683 |
1.54e-11 |
SMART |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000113261
AA Change: K443T
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000108886
Gene: ENSMUSG00000064293
AA Change: K443T
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
IGc2
|
41 |
107 |
2.32e-8 |
SMART |
|
IG
|
129 |
215 |
3.4e-6 |
SMART |
|
IGc2
|
238 |
302 |
8.76e-18 |
SMART |
|
IGc2
|
328 |
391 |
2.91e-14 |
SMART |
|
IGc2
|
420 |
484 |
1.58e-10 |
SMART |
|
IG
|
504 |
594 |
9.55e-10 |
SMART |
|
FN3
|
597 |
683 |
1.54e-11 |
SMART |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000113264
AA Change: K443T
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000108889
Gene: ENSMUSG00000064293
AA Change: K443T
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
IGc2
|
41 |
107 |
2.32e-8 |
SMART |
|
IG
|
129 |
215 |
3.4e-6 |
SMART |
|
IGc2
|
238 |
302 |
8.76e-18 |
SMART |
|
IGc2
|
328 |
391 |
2.91e-14 |
SMART |
|
IGc2
|
420 |
484 |
1.58e-10 |
SMART |
|
IG
|
504 |
594 |
9.55e-10 |
SMART |
|
FN3
|
597 |
683 |
1.54e-11 |
SMART |
|
FN3
|
700 |
786 |
8.39e0 |
SMART |
|
FN3
|
801 |
886 |
1.33e-6 |
SMART |
|
FN3
|
901 |
981 |
9.85e-1 |
SMART |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000132395
|
| Meta Mutation Damage Score |
0.2906 |
| Coding Region Coverage |
- 1x: 99.4%
- 3x: 98.9%
- 10x: 97.8%
- 20x: 96.1%
|
| Validation Efficiency |
99% (99/100) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the contactin family of immunoglobulins. Contactins are axon-associated cell adhesion molecules that function in neuronal network formation and plasticity. The encoded protein is a glycosylphosphatidylinositol-anchored neuronal membrane protein that may play a role in the formation of axon connections in the developing nervous system. Deletion or mutation of this gene may play a role in 3p deletion syndrome and autism spectrum disorders. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2011]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit aberrant projection of olfactory axons to multiple glomeruli in the olfactory bulb. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 99 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adam9 |
A |
T |
8: 25,486,774 (GRCm39) |
I168N |
probably benign |
Het |
| Adamts20 |
G |
A |
15: 94,245,571 (GRCm39) |
A577V |
probably benign |
Het |
| Agtr1a |
A |
T |
13: 30,565,279 (GRCm39) |
S115C |
probably damaging |
Het |
| Ankrd11 |
T |
C |
8: 123,618,692 (GRCm39) |
Y1720C |
probably damaging |
Het |
| Ano6 |
A |
T |
15: 95,818,252 (GRCm39) |
T353S |
probably damaging |
Het |
| App |
A |
G |
16: 84,876,840 (GRCm39) |
F184L |
probably damaging |
Het |
| Arhgef38 |
T |
A |
3: 132,843,232 (GRCm39) |
Y446F |
probably benign |
Het |
| Aspg |
T |
A |
12: 112,078,693 (GRCm39) |
Y57* |
probably null |
Het |
| Atp1a4 |
G |
A |
1: 172,067,774 (GRCm39) |
|
probably benign |
Het |
| Bdp1 |
G |
A |
13: 100,195,459 (GRCm39) |
|
probably benign |
Het |
| Bicd2 |
T |
A |
13: 49,531,717 (GRCm39) |
S246T |
possibly damaging |
Het |
| Brd10 |
T |
A |
19: 29,695,381 (GRCm39) |
I1438F |
probably benign |
Het |
| Bsn |
T |
A |
9: 107,984,011 (GRCm39) |
M3348L |
unknown |
Het |
| Cacna1c |
C |
T |
6: 118,589,586 (GRCm39) |
R1446H |
probably damaging |
Het |
| Cacna2d3 |
T |
C |
14: 28,704,322 (GRCm39) |
I820V |
probably benign |
Het |
| Cdc40 |
A |
G |
10: 40,720,952 (GRCm39) |
|
probably benign |
Het |
| Cdh23 |
T |
C |
10: 60,159,493 (GRCm39) |
E2094G |
probably damaging |
Het |
| Celsr2 |
T |
A |
3: 108,305,922 (GRCm39) |
N2061Y |
probably damaging |
Het |
| Cfap206 |
G |
A |
4: 34,711,391 (GRCm39) |
A502V |
probably benign |
Het |
| Cfap54 |
T |
C |
10: 92,870,599 (GRCm39) |
T29A |
probably benign |
Het |
| Cfap57 |
T |
C |
4: 118,470,117 (GRCm39) |
|
probably null |
Het |
| Chd5 |
A |
G |
4: 152,432,441 (GRCm39) |
E43G |
possibly damaging |
Het |
| Clk1 |
G |
A |
1: 58,453,558 (GRCm39) |
H343Y |
probably benign |
Het |
| Csn2 |
G |
A |
5: 87,842,811 (GRCm39) |
A72V |
possibly damaging |
Het |
| Ctdp1 |
T |
A |
18: 80,493,457 (GRCm39) |
H346L |
probably benign |
Het |
| Ctif |
A |
T |
18: 75,698,083 (GRCm39) |
N192K |
probably damaging |
Het |
| Ddr2 |
G |
A |
1: 169,823,135 (GRCm39) |
A383V |
probably benign |
Het |
| Derl3 |
C |
T |
10: 75,731,076 (GRCm39) |
|
probably benign |
Het |
| Dgkh |
T |
C |
14: 78,821,919 (GRCm39) |
I865V |
probably damaging |
Het |
| Dip2b |
C |
T |
15: 100,069,532 (GRCm39) |
A619V |
probably damaging |
Het |
| Elapor1 |
T |
A |
3: 108,376,851 (GRCm39) |
H509L |
probably benign |
Het |
| Eml1 |
A |
G |
12: 108,496,585 (GRCm39) |
T614A |
possibly damaging |
Het |
| Eogt |
G |
C |
6: 97,092,970 (GRCm39) |
Y402* |
probably null |
Het |
| Erbb4 |
A |
G |
1: 68,298,449 (GRCm39) |
V647A |
probably damaging |
Het |
| Esm1 |
G |
T |
13: 113,350,036 (GRCm39) |
|
probably null |
Het |
| Fbxo31 |
A |
G |
8: 122,282,103 (GRCm39) |
|
probably benign |
Het |
| Fbxw5 |
T |
A |
2: 25,394,630 (GRCm39) |
D201E |
possibly damaging |
Het |
| Fgfr1 |
G |
A |
8: 26,045,760 (GRCm39) |
D123N |
probably benign |
Het |
| G530012D18Rik |
A |
C |
1: 85,504,757 (GRCm39) |
|
probably benign |
Het |
| Gnat1 |
G |
A |
9: 107,556,662 (GRCm39) |
T29I |
probably damaging |
Het |
| Gtf2ird2 |
A |
T |
5: 134,221,597 (GRCm39) |
R67* |
probably null |
Het |
| Il22b |
A |
T |
10: 118,130,142 (GRCm39) |
D87E |
probably benign |
Het |
| Kcnq3 |
T |
C |
15: 65,867,457 (GRCm39) |
T729A |
probably benign |
Het |
| Klrc2 |
A |
T |
6: 129,635,659 (GRCm39) |
S156R |
probably damaging |
Het |
| Krt76 |
A |
T |
15: 101,795,784 (GRCm39) |
L462Q |
probably damaging |
Het |
| Lama3 |
C |
A |
18: 12,589,907 (GRCm39) |
|
probably benign |
Het |
| Lin28a |
A |
T |
4: 133,735,319 (GRCm39) |
S56T |
probably damaging |
Het |
| Macf1 |
A |
G |
4: 123,276,323 (GRCm39) |
|
probably benign |
Het |
| Macrod2 |
C |
T |
2: 142,059,594 (GRCm39) |
|
probably benign |
Het |
| Mansc1 |
C |
T |
6: 134,594,424 (GRCm39) |
|
probably benign |
Het |
| Map1b |
G |
T |
13: 99,566,274 (GRCm39) |
S2149* |
probably null |
Het |
| Mgst1 |
A |
T |
6: 138,124,667 (GRCm39) |
T34S |
probably benign |
Het |
| Mlf2 |
C |
T |
6: 124,911,354 (GRCm39) |
T123M |
probably damaging |
Het |
| Mospd2 |
C |
T |
X: 163,731,253 (GRCm39) |
|
probably benign |
Het |
| Mrpl15 |
A |
T |
1: 4,847,834 (GRCm39) |
V155E |
probably damaging |
Het |
| Mstn |
A |
T |
1: 53,100,953 (GRCm39) |
Y10F |
possibly damaging |
Het |
| Myo1g |
C |
T |
11: 6,470,794 (GRCm39) |
V21M |
probably damaging |
Het |
| Myom2 |
T |
C |
8: 15,149,326 (GRCm39) |
I599T |
probably benign |
Het |
| Ndc80 |
A |
T |
17: 71,803,241 (GRCm39) |
N633K |
probably benign |
Het |
| Nhs |
C |
A |
X: 160,620,296 (GRCm39) |
V1487L |
possibly damaging |
Het |
| Npc1 |
T |
C |
18: 12,352,382 (GRCm39) |
T106A |
probably benign |
Het |
| Nup133 |
C |
T |
8: 124,675,747 (GRCm39) |
V57M |
probably benign |
Het |
| Nup98 |
T |
A |
7: 101,809,923 (GRCm39) |
T536S |
probably damaging |
Het |
| Oprm1 |
T |
C |
10: 6,782,652 (GRCm39) |
|
probably benign |
Het |
| Or5j1 |
T |
C |
2: 86,879,492 (GRCm39) |
I29M |
probably benign |
Het |
| Or6c219 |
T |
A |
10: 129,780,980 (GRCm39) |
H317L |
probably benign |
Het |
| Or8j3 |
A |
G |
2: 86,029,069 (GRCm39) |
V9A |
probably benign |
Het |
| Ostf1 |
C |
T |
19: 18,581,571 (GRCm39) |
V14I |
unknown |
Het |
| Pcdhb14 |
C |
A |
18: 37,581,921 (GRCm39) |
D342E |
probably damaging |
Het |
| Pdia3 |
G |
A |
2: 121,262,858 (GRCm39) |
G275S |
probably damaging |
Het |
| Pdpr |
T |
C |
8: 111,852,387 (GRCm39) |
|
probably null |
Het |
| Plce1 |
G |
A |
19: 38,705,135 (GRCm39) |
V847M |
probably damaging |
Het |
| Pon3 |
A |
G |
6: 5,230,444 (GRCm39) |
M288T |
probably benign |
Het |
| Psd2 |
A |
T |
18: 36,111,627 (GRCm39) |
D84V |
possibly damaging |
Het |
| Ptpro |
T |
A |
6: 137,420,592 (GRCm39) |
V1007D |
probably damaging |
Het |
| Ralgapa1 |
T |
C |
12: 55,712,448 (GRCm39) |
K1808E |
probably damaging |
Het |
| Ramp3 |
T |
C |
11: 6,626,476 (GRCm39) |
|
probably benign |
Het |
| Rasgrf1 |
T |
A |
9: 89,833,062 (GRCm39) |
|
probably benign |
Het |
| Rictor |
A |
G |
15: 6,803,467 (GRCm39) |
|
probably benign |
Het |
| Rptor |
A |
T |
11: 119,775,780 (GRCm39) |
I984F |
probably benign |
Het |
| Slc1a6 |
C |
T |
10: 78,631,842 (GRCm39) |
P223S |
probably benign |
Het |
| Taar8b |
A |
C |
10: 23,967,924 (GRCm39) |
V90G |
probably damaging |
Het |
| Tbc1d21 |
A |
G |
9: 58,267,160 (GRCm39) |
V327A |
probably benign |
Het |
| Tex21 |
T |
C |
12: 76,250,940 (GRCm39) |
T499A |
probably benign |
Het |
| Tg |
A |
T |
15: 66,550,638 (GRCm39) |
D256V |
probably damaging |
Het |
| Tmf1 |
A |
G |
6: 97,153,453 (GRCm39) |
S207P |
probably benign |
Het |
| Tpr |
A |
G |
1: 150,269,158 (GRCm39) |
|
probably benign |
Het |
| Ufd1 |
A |
G |
16: 18,633,637 (GRCm39) |
T21A |
probably damaging |
Het |
| Unc13a |
T |
C |
8: 72,108,929 (GRCm39) |
D115G |
possibly damaging |
Het |
| Usb1 |
T |
A |
8: 96,070,669 (GRCm39) |
F198L |
probably damaging |
Het |
| Utrn |
A |
T |
10: 12,573,902 (GRCm39) |
|
probably benign |
Het |
| Vars1 |
A |
G |
17: 35,233,276 (GRCm39) |
N954S |
probably damaging |
Het |
| Wdr17 |
C |
T |
8: 55,146,131 (GRCm39) |
A90T |
possibly damaging |
Het |
| Wdr33 |
C |
T |
18: 31,968,429 (GRCm39) |
|
probably benign |
Het |
| Zfp236 |
A |
G |
18: 82,658,369 (GRCm39) |
|
probably benign |
Het |
| Zfp445 |
A |
T |
9: 122,690,823 (GRCm39) |
V124E |
probably damaging |
Het |
| Zfp616 |
A |
T |
11: 73,975,648 (GRCm39) |
H639L |
probably damaging |
Het |
| Zfyve16 |
C |
A |
13: 92,657,985 (GRCm39) |
S642I |
probably damaging |
Het |
| Zswim5 |
C |
T |
4: 116,842,943 (GRCm39) |
T896I |
possibly damaging |
Het |
|
| Other mutations in Cntn4 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00092:Cntn4
|
APN |
6 |
106,483,186 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00725:Cntn4
|
APN |
6 |
106,639,616 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01062:Cntn4
|
APN |
6 |
106,595,239 (GRCm39) |
splice site |
probably benign |
|
|
IGL01432:Cntn4
|
APN |
6 |
106,655,295 (GRCm39) |
splice site |
probably benign |
|
|
IGL01585:Cntn4
|
APN |
6 |
106,595,289 (GRCm39) |
nonsense |
probably null |
|
|
IGL01710:Cntn4
|
APN |
6 |
106,527,392 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
IGL01870:Cntn4
|
APN |
6 |
106,466,676 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
IGL01933:Cntn4
|
APN |
6 |
106,671,345 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL01937:Cntn4
|
APN |
6 |
106,414,865 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01945:Cntn4
|
APN |
6 |
106,414,865 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02007:Cntn4
|
APN |
6 |
106,632,490 (GRCm39) |
missense |
probably benign |
0.03 |
|
IGL02506:Cntn4
|
APN |
6 |
106,595,349 (GRCm39) |
missense |
probably benign |
0.24 |
|
IGL02561:Cntn4
|
APN |
6 |
106,500,470 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03080:Cntn4
|
APN |
6 |
106,632,500 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03338:Cntn4
|
APN |
6 |
106,632,550 (GRCm39) |
missense |
probably damaging |
0.98 |
|
IGL03097:Cntn4
|
UTSW |
6 |
106,330,673 (GRCm39) |
missense |
probably benign |
0.10 |
|
LCD18:Cntn4
|
UTSW |
6 |
106,530,901 (GRCm39) |
intron |
probably benign |
|
|
R0083:Cntn4
|
UTSW |
6 |
106,502,330 (GRCm39) |
missense |
possibly damaging |
0.79 |
|
R0098:Cntn4
|
UTSW |
6 |
106,595,385 (GRCm39) |
splice site |
probably benign |
|
|
R0501:Cntn4
|
UTSW |
6 |
106,595,296 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0626:Cntn4
|
UTSW |
6 |
106,639,539 (GRCm39) |
missense |
probably benign |
0.07 |
|
R0633:Cntn4
|
UTSW |
6 |
106,656,209 (GRCm39) |
splice site |
probably null |
|
|
R0849:Cntn4
|
UTSW |
6 |
106,644,418 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0883:Cntn4
|
UTSW |
6 |
106,644,501 (GRCm39) |
splice site |
probably benign |
|
|
R0926:Cntn4
|
UTSW |
6 |
106,632,542 (GRCm39) |
missense |
probably benign |
0.21 |
|
R1199:Cntn4
|
UTSW |
6 |
106,330,558 (GRCm39) |
splice site |
probably benign |
|
|
R1293:Cntn4
|
UTSW |
6 |
106,330,685 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1296:Cntn4
|
UTSW |
6 |
106,486,363 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1344:Cntn4
|
UTSW |
6 |
106,321,831 (GRCm39) |
splice site |
probably null |
|
|
R1418:Cntn4
|
UTSW |
6 |
106,321,831 (GRCm39) |
splice site |
probably null |
|
|
R1660:Cntn4
|
UTSW |
6 |
106,656,258 (GRCm39) |
missense |
probably benign |
0.35 |
|
R1751:Cntn4
|
UTSW |
6 |
106,595,371 (GRCm39) |
critical splice donor site |
probably null |
|
|
R1883:Cntn4
|
UTSW |
6 |
106,656,353 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1884:Cntn4
|
UTSW |
6 |
106,656,353 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1899:Cntn4
|
UTSW |
6 |
106,652,774 (GRCm39) |
missense |
probably benign |
0.21 |
|
R1906:Cntn4
|
UTSW |
6 |
106,330,607 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2048:Cntn4
|
UTSW |
6 |
106,414,825 (GRCm39) |
splice site |
probably benign |
|
|
R2113:Cntn4
|
UTSW |
6 |
106,466,658 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3177:Cntn4
|
UTSW |
6 |
106,414,925 (GRCm39) |
critical splice donor site |
probably null |
|
|
R3277:Cntn4
|
UTSW |
6 |
106,414,925 (GRCm39) |
critical splice donor site |
probably null |
|
|
R3944:Cntn4
|
UTSW |
6 |
106,595,375 (GRCm39) |
missense |
probably benign |
0.10 |
|
R4401:Cntn4
|
UTSW |
6 |
106,466,625 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R4540:Cntn4
|
UTSW |
6 |
106,652,709 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4688:Cntn4
|
UTSW |
6 |
106,414,910 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4697:Cntn4
|
UTSW |
6 |
106,502,446 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4810:Cntn4
|
UTSW |
6 |
106,632,572 (GRCm39) |
missense |
probably benign |
0.04 |
|
R4816:Cntn4
|
UTSW |
6 |
106,527,458 (GRCm39) |
missense |
probably benign |
|
|
R4873:Cntn4
|
UTSW |
6 |
106,414,874 (GRCm39) |
missense |
possibly damaging |
0.61 |
|
R4875:Cntn4
|
UTSW |
6 |
106,414,874 (GRCm39) |
missense |
possibly damaging |
0.61 |
|
R4953:Cntn4
|
UTSW |
6 |
106,502,379 (GRCm39) |
missense |
probably benign |
0.01 |
|
R5288:Cntn4
|
UTSW |
6 |
106,158,765 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
R5336:Cntn4
|
UTSW |
6 |
106,639,595 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
R5386:Cntn4
|
UTSW |
6 |
106,158,765 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
R5477:Cntn4
|
UTSW |
6 |
106,650,911 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R5514:Cntn4
|
UTSW |
6 |
106,649,844 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5668:Cntn4
|
UTSW |
6 |
106,656,397 (GRCm39) |
splice site |
silent |
|
|
R6334:Cntn4
|
UTSW |
6 |
106,321,747 (GRCm39) |
missense |
probably benign |
|
|
R6334:Cntn4
|
UTSW |
6 |
106,483,153 (GRCm39) |
missense |
probably benign |
0.29 |
|
R6904:Cntn4
|
UTSW |
6 |
106,674,544 (GRCm39) |
missense |
probably benign |
0.03 |
|
R6985:Cntn4
|
UTSW |
6 |
106,656,378 (GRCm39) |
missense |
probably benign |
0.03 |
|
R7246:Cntn4
|
UTSW |
6 |
106,483,180 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7282:Cntn4
|
UTSW |
6 |
106,502,421 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7585:Cntn4
|
UTSW |
6 |
106,466,572 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7667:Cntn4
|
UTSW |
6 |
106,656,856 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R7781:Cntn4
|
UTSW |
6 |
106,500,575 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7882:Cntn4
|
UTSW |
6 |
106,330,684 (GRCm39) |
missense |
probably benign |
|
|
R8081:Cntn4
|
UTSW |
6 |
106,651,568 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R8105:Cntn4
|
UTSW |
6 |
106,330,567 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8221:Cntn4
|
UTSW |
6 |
106,486,471 (GRCm39) |
missense |
probably benign |
0.17 |
|
R8910:Cntn4
|
UTSW |
6 |
106,632,497 (GRCm39) |
missense |
probably benign |
0.10 |
|
R8911:Cntn4
|
UTSW |
6 |
106,330,743 (GRCm39) |
critical splice donor site |
probably null |
|
|
R8916:Cntn4
|
UTSW |
6 |
106,652,915 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9249:Cntn4
|
UTSW |
6 |
106,466,722 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R9376:Cntn4
|
UTSW |
6 |
106,639,591 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9616:Cntn4
|
UTSW |
6 |
106,674,525 (GRCm39) |
nonsense |
probably null |
|
|
R9767:Cntn4
|
UTSW |
6 |
106,655,395 (GRCm39) |
missense |
probably benign |
0.40 |
|
Z1176:Cntn4
|
UTSW |
6 |
106,500,524 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1176:Cntn4
|
UTSW |
6 |
106,486,425 (GRCm39) |
missense |
probably benign |
0.28 |
|
Z1177:Cntn4
|
UTSW |
6 |
106,639,579 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1177:Cntn4
|
UTSW |
6 |
106,527,386 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- AATCAGGAAACTTGCCAAATGCAGC -3'
(R):5'- ACATGGAGGTCAGAGTTACCATTGTCT -3'
Sequencing Primer
(F):5'- ACAGGGGGCTAAGAATGTTTCTATC -3'
(R):5'- ATACCTTCTGGATTTGATTATTTGCT -3'
|
| Posted On |
2013-09-03 |
Incidental Mutation