Incidental Mutation 'IGL02207:Nlrp4a'
| ID |
284518 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Nlrp4a
|
| Ensembl Gene |
ENSMUSG00000040601 |
| Gene Name |
NLR family, pyrin domain containing 4A |
| Synonyms |
Nalp-eta, E330028A19Rik, Nalp4a |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.079)
|
| Stock # |
IGL02207
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
7 |
| Chromosomal Location |
26134538-26175100 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to T
at 26148703 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Lysine to Asparagine
at position 103
(K103N)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000146044
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000068767]
[ENSMUST00000119386]
[ENSMUST00000146907]
|
| AlphaFold |
Q8BU40 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000068767
AA Change: K103N
PolyPhen 2
Score 0.772 (Sensitivity: 0.85; Specificity: 0.92)
|
| SMART Domains |
Protein: ENSMUSP00000066841
Gene: ENSMUSG00000040601
AA Change: K103N
| Domain | Start | End | E-Value | Type |
|---|
|
PYRIN
|
6 |
89 |
6.48e-34 |
SMART |
|
Pfam:NACHT
|
148 |
317 |
4.9e-37 |
PFAM |
|
Blast:LRR
|
634 |
661 |
4e-6 |
BLAST |
|
low complexity region
|
666 |
677 |
N/A |
INTRINSIC |
|
LRR
|
689 |
716 |
5.96e0 |
SMART |
|
LRR
|
718 |
745 |
1.99e1 |
SMART |
|
LRR
|
746 |
772 |
1.02e0 |
SMART |
|
LRR
|
774 |
801 |
4.66e1 |
SMART |
|
LRR
|
802 |
829 |
1.18e-2 |
SMART |
|
LRR
|
831 |
858 |
2.2e-2 |
SMART |
|
LRR
|
859 |
886 |
5.59e-4 |
SMART |
|
LRR
|
888 |
915 |
9.41e0 |
SMART |
|
LRR
|
916 |
943 |
8.94e1 |
SMART |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000119386
AA Change: K103N
PolyPhen 2
Score 0.772 (Sensitivity: 0.85; Specificity: 0.92)
|
| SMART Domains |
Protein: ENSMUSP00000112441
Gene: ENSMUSG00000040601
AA Change: K103N
| Domain | Start | End | E-Value | Type |
|---|
|
PYRIN
|
6 |
89 |
6.48e-34 |
SMART |
|
Pfam:NACHT
|
148 |
317 |
1.3e-37 |
PFAM |
|
Blast:LRR
|
634 |
661 |
4e-6 |
BLAST |
|
low complexity region
|
666 |
677 |
N/A |
INTRINSIC |
|
LRR
|
689 |
716 |
5.96e0 |
SMART |
|
LRR
|
718 |
745 |
1.99e1 |
SMART |
|
LRR
|
746 |
772 |
1.02e0 |
SMART |
|
LRR
|
774 |
801 |
4.66e1 |
SMART |
|
LRR
|
802 |
829 |
1.18e-2 |
SMART |
|
LRR
|
831 |
858 |
2.2e-2 |
SMART |
|
LRR
|
859 |
886 |
5.59e-4 |
SMART |
|
LRR
|
888 |
915 |
9.41e0 |
SMART |
|
LRR
|
916 |
943 |
8.94e1 |
SMART |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000146534
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000146907
AA Change: K103N
PolyPhen 2
Score 0.772 (Sensitivity: 0.85; Specificity: 0.92)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 70 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adamtsl2 |
A |
G |
2: 26,992,993 (GRCm39) |
E702G |
probably damaging |
Het |
| Adgre5 |
T |
C |
8: 84,454,913 (GRCm39) |
T260A |
probably damaging |
Het |
| Agap3 |
A |
T |
5: 24,704,934 (GRCm39) |
T660S |
probably benign |
Het |
| Amotl2 |
A |
T |
9: 102,601,896 (GRCm39) |
E380V |
probably damaging |
Het |
| Ap4e1 |
A |
G |
2: 126,853,736 (GRCm39) |
E58G |
probably damaging |
Het |
| Arap3 |
G |
A |
18: 38,120,906 (GRCm39) |
A713V |
probably benign |
Het |
| B4galt2 |
T |
C |
4: 117,738,718 (GRCm39) |
D33G |
probably damaging |
Het |
| Bbs7 |
A |
T |
3: 36,658,639 (GRCm39) |
S212T |
probably benign |
Het |
| Ccl26 |
A |
G |
5: 135,592,224 (GRCm39) |
Y38H |
probably benign |
Het |
| Ccne2 |
A |
T |
4: 11,202,261 (GRCm39) |
S339C |
probably benign |
Het |
| Cd55 |
A |
G |
1: 130,380,156 (GRCm39) |
V274A |
possibly damaging |
Het |
| Cenpw |
T |
G |
10: 30,074,577 (GRCm39) |
|
probably null |
Het |
| Cert1 |
T |
C |
13: 96,761,300 (GRCm39) |
|
probably null |
Het |
| Chrnb4 |
T |
C |
9: 54,942,500 (GRCm39) |
D258G |
probably damaging |
Het |
| Commd3 |
T |
C |
2: 18,678,819 (GRCm39) |
|
probably null |
Het |
| Csgalnact1 |
C |
A |
8: 68,854,144 (GRCm39) |
G219V |
probably damaging |
Het |
| Cyp2b23 |
C |
A |
7: 26,381,180 (GRCm39) |
R59L |
probably damaging |
Het |
| Edar |
G |
T |
10: 58,446,343 (GRCm39) |
T194K |
probably damaging |
Het |
| Edem3 |
A |
G |
1: 151,684,111 (GRCm39) |
I733V |
possibly damaging |
Het |
| Elmod2 |
T |
C |
8: 84,048,135 (GRCm39) |
Y109C |
probably benign |
Het |
| Eps15 |
C |
T |
4: 109,161,945 (GRCm39) |
|
probably benign |
Het |
| Fat4 |
T |
C |
3: 39,005,412 (GRCm39) |
V1937A |
probably benign |
Het |
| Fdx2 |
T |
A |
9: 20,979,415 (GRCm39) |
|
probably null |
Het |
| Flg2 |
A |
T |
3: 93,127,435 (GRCm39) |
I2116F |
unknown |
Het |
| Gm15091 |
A |
G |
X: 148,760,462 (GRCm39) |
D424G |
possibly damaging |
Het |
| Gm16380 |
T |
A |
9: 53,791,823 (GRCm39) |
|
noncoding transcript |
Het |
| Gpn2 |
G |
A |
4: 133,311,947 (GRCm39) |
V60M |
possibly damaging |
Het |
| Grip1 |
G |
A |
10: 119,911,214 (GRCm39) |
R1044K |
probably damaging |
Het |
| H2-D1 |
T |
A |
17: 35,482,390 (GRCm39) |
S37T |
possibly damaging |
Het |
| Havcr1 |
C |
T |
11: 46,669,403 (GRCm39) |
A294V |
probably benign |
Het |
| Herc4 |
G |
A |
10: 63,135,023 (GRCm39) |
|
probably null |
Het |
| Ift140 |
A |
G |
17: 25,274,572 (GRCm39) |
Y748C |
probably benign |
Het |
| Il20ra |
A |
G |
10: 19,627,326 (GRCm39) |
T242A |
probably damaging |
Het |
| Ilvbl |
G |
A |
10: 78,419,536 (GRCm39) |
|
probably null |
Het |
| Kif18a |
A |
T |
2: 109,127,052 (GRCm39) |
I329L |
probably damaging |
Het |
| Kmt2a |
T |
A |
9: 44,758,979 (GRCm39) |
I957F |
probably damaging |
Het |
| Krt1 |
A |
G |
15: 101,757,051 (GRCm39) |
I282T |
possibly damaging |
Het |
| Lamb1 |
T |
G |
12: 31,379,434 (GRCm39) |
V1768G |
probably damaging |
Het |
| Nek9 |
A |
T |
12: 85,350,257 (GRCm39) |
L939* |
probably null |
Het |
| Nfe2l2 |
A |
G |
2: 75,508,869 (GRCm39) |
L122P |
probably damaging |
Het |
| Nin |
T |
C |
12: 70,103,431 (GRCm39) |
M270V |
probably damaging |
Het |
| Nrde2 |
T |
C |
12: 100,097,190 (GRCm39) |
Y870C |
probably benign |
Het |
| Nsmce2 |
A |
G |
15: 59,287,927 (GRCm39) |
M71V |
probably benign |
Het |
| Ocstamp |
T |
C |
2: 165,239,583 (GRCm39) |
H201R |
possibly damaging |
Het |
| Oog4 |
T |
C |
4: 143,165,510 (GRCm39) |
I212M |
probably benign |
Het |
| Or11g2 |
G |
A |
14: 50,856,015 (GRCm39) |
G112D |
probably damaging |
Het |
| Or12e7 |
A |
G |
2: 87,287,794 (GRCm39) |
D95G |
probably benign |
Het |
| Osmr |
T |
C |
15: 6,876,628 (GRCm39) |
T99A |
probably benign |
Het |
| Pdia4 |
A |
T |
6: 47,773,741 (GRCm39) |
M536K |
probably benign |
Het |
| Pdyn |
A |
T |
2: 129,530,438 (GRCm39) |
L77H |
probably damaging |
Het |
| Pikfyve |
T |
C |
1: 65,290,837 (GRCm39) |
|
probably null |
Het |
| Plcb1 |
A |
G |
2: 135,229,091 (GRCm39) |
E1105G |
probably damaging |
Het |
| Rb1 |
A |
T |
14: 73,443,525 (GRCm39) |
D743E |
probably damaging |
Het |
| Rdh14 |
G |
A |
12: 10,444,712 (GRCm39) |
V188I |
possibly damaging |
Het |
| Scd3 |
T |
C |
19: 44,204,028 (GRCm39) |
V72A |
possibly damaging |
Het |
| Shld1 |
A |
T |
2: 132,533,866 (GRCm39) |
|
probably benign |
Het |
| Slc25a27 |
G |
A |
17: 43,972,575 (GRCm39) |
R104W |
probably damaging |
Het |
| Slc29a4 |
A |
G |
5: 142,704,640 (GRCm39) |
D394G |
possibly damaging |
Het |
| Slco1a8 |
A |
T |
6: 141,936,158 (GRCm39) |
I309N |
possibly damaging |
Het |
| Snx29 |
T |
G |
16: 11,556,216 (GRCm39) |
M407R |
probably damaging |
Het |
| Syf2 |
A |
G |
4: 134,662,363 (GRCm39) |
|
probably null |
Het |
| Syn1 |
T |
C |
X: 20,731,376 (GRCm39) |
Q321R |
probably benign |
Het |
| Tbc1d12 |
A |
T |
19: 38,905,091 (GRCm39) |
D602V |
probably damaging |
Het |
| Tenm4 |
A |
T |
7: 96,523,323 (GRCm39) |
I1585F |
possibly damaging |
Het |
| Tgfbr1 |
A |
G |
4: 47,410,785 (GRCm39) |
|
probably benign |
Het |
| Trav6-2 |
G |
A |
14: 52,904,889 (GRCm39) |
V8M |
possibly damaging |
Het |
| Unc119b |
A |
G |
5: 115,272,813 (GRCm39) |
S53P |
probably benign |
Het |
| Vmp1 |
T |
A |
11: 86,498,019 (GRCm39) |
I299F |
possibly damaging |
Het |
| Xpot |
T |
C |
10: 121,449,485 (GRCm39) |
Y194C |
probably damaging |
Het |
| Zbtb10 |
T |
A |
3: 9,345,525 (GRCm39) |
|
probably null |
Het |
|
| Other mutations in Nlrp4a |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00487:Nlrp4a
|
APN |
7 |
26,149,410 (GRCm39) |
missense |
possibly damaging |
0.51 |
|
IGL00972:Nlrp4a
|
APN |
7 |
26,156,473 (GRCm39) |
missense |
probably benign |
|
|
IGL01081:Nlrp4a
|
APN |
7 |
26,149,254 (GRCm39) |
missense |
probably benign |
0.06 |
|
IGL01788:Nlrp4a
|
APN |
7 |
26,153,492 (GRCm39) |
missense |
probably benign |
0.17 |
|
IGL02001:Nlrp4a
|
APN |
7 |
26,149,394 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL02070:Nlrp4a
|
APN |
7 |
26,148,703 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
IGL02175:Nlrp4a
|
APN |
7 |
26,174,522 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02193:Nlrp4a
|
APN |
7 |
26,148,703 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
IGL02193:Nlrp4a
|
APN |
7 |
26,159,117 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02197:Nlrp4a
|
APN |
7 |
26,148,703 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
IGL02200:Nlrp4a
|
APN |
7 |
26,148,703 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
IGL02202:Nlrp4a
|
APN |
7 |
26,148,703 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
IGL02237:Nlrp4a
|
APN |
7 |
26,148,703 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
IGL02240:Nlrp4a
|
APN |
7 |
26,148,703 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
IGL02658:Nlrp4a
|
APN |
7 |
26,149,138 (GRCm39) |
missense |
probably benign |
0.43 |
|
IGL02743:Nlrp4a
|
APN |
7 |
26,159,240 (GRCm39) |
splice site |
probably benign |
|
|
IGL02960:Nlrp4a
|
APN |
7 |
26,149,155 (GRCm39) |
missense |
probably benign |
0.05 |
|
IGL03064:Nlrp4a
|
APN |
7 |
26,148,934 (GRCm39) |
missense |
probably benign |
0.23 |
|
IGL03276:Nlrp4a
|
APN |
7 |
26,163,615 (GRCm39) |
missense |
probably damaging |
1.00 |
|
BB002:Nlrp4a
|
UTSW |
7 |
26,150,011 (GRCm39) |
missense |
probably benign |
0.10 |
|
BB012:Nlrp4a
|
UTSW |
7 |
26,150,011 (GRCm39) |
missense |
probably benign |
0.10 |
|
D3080:Nlrp4a
|
UTSW |
7 |
26,143,766 (GRCm39) |
missense |
probably benign |
0.22 |
|
P0019:Nlrp4a
|
UTSW |
7 |
26,149,062 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0020:Nlrp4a
|
UTSW |
7 |
26,149,797 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0240:Nlrp4a
|
UTSW |
7 |
26,161,941 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0240:Nlrp4a
|
UTSW |
7 |
26,161,941 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0372:Nlrp4a
|
UTSW |
7 |
26,148,657 (GRCm39) |
splice site |
probably benign |
|
|
R0466:Nlrp4a
|
UTSW |
7 |
26,162,045 (GRCm39) |
splice site |
probably benign |
|
|
R0544:Nlrp4a
|
UTSW |
7 |
26,156,555 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1006:Nlrp4a
|
UTSW |
7 |
26,152,892 (GRCm39) |
missense |
probably benign |
0.30 |
|
R1072:Nlrp4a
|
UTSW |
7 |
26,143,860 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1432:Nlrp4a
|
UTSW |
7 |
26,163,622 (GRCm39) |
frame shift |
probably null |
|
|
R1655:Nlrp4a
|
UTSW |
7 |
26,149,076 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
R1696:Nlrp4a
|
UTSW |
7 |
26,149,959 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2041:Nlrp4a
|
UTSW |
7 |
26,149,611 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R2091:Nlrp4a
|
UTSW |
7 |
26,149,578 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2163:Nlrp4a
|
UTSW |
7 |
26,152,822 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2174:Nlrp4a
|
UTSW |
7 |
26,148,849 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2319:Nlrp4a
|
UTSW |
7 |
26,149,319 (GRCm39) |
missense |
probably benign |
0.10 |
|
R2358:Nlrp4a
|
UTSW |
7 |
26,163,623 (GRCm39) |
missense |
probably benign |
0.03 |
|
R2680:Nlrp4a
|
UTSW |
7 |
26,148,655 (GRCm39) |
splice site |
probably null |
|
|
R3812:Nlrp4a
|
UTSW |
7 |
26,149,118 (GRCm39) |
missense |
probably benign |
|
|
R4114:Nlrp4a
|
UTSW |
7 |
26,149,365 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4664:Nlrp4a
|
UTSW |
7 |
26,148,943 (GRCm39) |
nonsense |
probably null |
|
|
R4676:Nlrp4a
|
UTSW |
7 |
26,149,654 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4708:Nlrp4a
|
UTSW |
7 |
26,163,533 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4728:Nlrp4a
|
UTSW |
7 |
26,174,515 (GRCm39) |
missense |
probably benign |
0.24 |
|
R4815:Nlrp4a
|
UTSW |
7 |
26,150,233 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4831:Nlrp4a
|
UTSW |
7 |
26,149,844 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R5007:Nlrp4a
|
UTSW |
7 |
26,161,905 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5253:Nlrp4a
|
UTSW |
7 |
26,149,917 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5262:Nlrp4a
|
UTSW |
7 |
26,159,236 (GRCm39) |
critical splice donor site |
probably null |
|
|
R5441:Nlrp4a
|
UTSW |
7 |
26,153,578 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5639:Nlrp4a
|
UTSW |
7 |
26,156,455 (GRCm39) |
missense |
probably benign |
0.02 |
|
R5641:Nlrp4a
|
UTSW |
7 |
26,149,589 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5771:Nlrp4a
|
UTSW |
7 |
26,152,814 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6312:Nlrp4a
|
UTSW |
7 |
26,148,821 (GRCm39) |
missense |
probably benign |
0.11 |
|
R7131:Nlrp4a
|
UTSW |
7 |
26,149,258 (GRCm39) |
missense |
probably benign |
0.21 |
|
R7149:Nlrp4a
|
UTSW |
7 |
26,149,863 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7348:Nlrp4a
|
UTSW |
7 |
26,143,698 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7384:Nlrp4a
|
UTSW |
7 |
26,148,963 (GRCm39) |
missense |
not run |
|
|
R7548:Nlrp4a
|
UTSW |
7 |
26,149,604 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7566:Nlrp4a
|
UTSW |
7 |
26,148,670 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R7646:Nlrp4a
|
UTSW |
7 |
26,148,987 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R7692:Nlrp4a
|
UTSW |
7 |
26,148,690 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7902:Nlrp4a
|
UTSW |
7 |
26,149,482 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
R7925:Nlrp4a
|
UTSW |
7 |
26,150,011 (GRCm39) |
missense |
probably benign |
0.10 |
|
R7937:Nlrp4a
|
UTSW |
7 |
26,163,571 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7992:Nlrp4a
|
UTSW |
7 |
26,150,070 (GRCm39) |
missense |
possibly damaging |
0.51 |
|
R8205:Nlrp4a
|
UTSW |
7 |
26,150,219 (GRCm39) |
missense |
probably benign |
|
|
R8477:Nlrp4a
|
UTSW |
7 |
26,159,219 (GRCm39) |
missense |
probably benign |
|
|
R8704:Nlrp4a
|
UTSW |
7 |
26,156,563 (GRCm39) |
missense |
probably benign |
0.02 |
|
R8791:Nlrp4a
|
UTSW |
7 |
26,143,561 (GRCm39) |
splice site |
probably benign |
|
|
R9220:Nlrp4a
|
UTSW |
7 |
26,149,523 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R9332:Nlrp4a
|
UTSW |
7 |
26,159,077 (GRCm39) |
missense |
probably damaging |
0.99 |
|
T0975:Nlrp4a
|
UTSW |
7 |
26,149,062 (GRCm39) |
missense |
probably damaging |
1.00 |
|
X0022:Nlrp4a
|
UTSW |
7 |
26,143,767 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Z1088:Nlrp4a
|
UTSW |
7 |
26,153,588 (GRCm39) |
missense |
probably benign |
0.01 |
|
| Posted On |
2015-04-16 |
Incidental Mutation