Mutagenetix > Incidental Mutation

Incidental Mutation 'R7637:Ndufb6'

628287

Institutional Source

Beutler Lab

Gene Symbol

Ndufb6

Ensembl Gene

ENSMUSG00000071014

Gene Name

NADH:ubiquinone oxidoreductase subunit B6

Synonyms

LOC230075

MMRRC Submission

045695-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.899) question?

Stock #

R7637 (G1)

Quality Score

109.008

Status

Validated

Chromosome

Chromosomal Location

40270591-40279421 bp(-) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

A to T at 40273080 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000103743 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000042575] [ENSMUST00000095128] [ENSMUST00000108108] [ENSMUST00000129758]

AlphaFold

Q3UIU2

Predicted Effect

probably benign
Transcript: ENSMUST00000042575

SMART Domains

Protein: ENSMUSP00000046843
Gene: ENSMUSG00000036822

Domain	Start	End	E-Value	Type
low complexity region	2	18	N/A	INTRINSIC
low complexity region	29	44	N/A	INTRINSIC
RING	104	142	7.27e-7	SMART
low complexity region	196	209	N/A	INTRINSIC
low complexity region	381	391	N/A	INTRINSIC
low complexity region	434	454	N/A	INTRINSIC
low complexity region	465	478	N/A	INTRINSIC
low complexity region	494	505	N/A	INTRINSIC
low complexity region	522	535	N/A	INTRINSIC
low complexity region	589	610	N/A	INTRINSIC
low complexity region	620	696	N/A	INTRINSIC
low complexity region	756	780	N/A	INTRINSIC
low complexity region	837	860	N/A	INTRINSIC
low complexity region	877	894	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000095128

SMART Domains

Protein: ENSMUSP00000092746
Gene: ENSMUSG00000071014

Domain	Start	End	E-Value	Type
Pfam:NDUF_B6	1	128	2e-52	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000108108

SMART Domains

Protein: ENSMUSP00000103743
Gene: ENSMUSG00000071014

Domain	Start	End	E-Value	Type
Pfam:NDUF_B6	1	62	1.5e-22	PFAM
Pfam:NDUF_B6	55	97	3.7e-13	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000129758

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.1%

Validation Efficiency

100% (51/51)

MGI Phenotype

FUNCTION: This gene encodes a subunit of complex I (NADH:ubiquinone oxidoreductase) of the mitochondrial respiratory chain. This complex functions in electron transport and generation of a proton gradient across the inner mitochondrial membrane to drive ATP synthesis. Data from human cell lines suggests that the encoded subunit may be required for electron transfer activity. [provided by RefSeq, Aug 2015]

Allele List at MGI

Other mutations in this stock

Total: 52 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca6	T	A	11: 110,109,778 (GRCm39)	Q651L	probably benign	Het
Adam8	C	T	7: 139,565,343 (GRCm39)	V624I	probably damaging	Het
Cltc	T	C	11: 86,621,158 (GRCm39)	H287R	probably damaging	Het
Cmya5	T	C	13: 93,219,720 (GRCm39)	K3243R	possibly damaging	Het
Dock5	G	A	14: 68,023,789 (GRCm39)	T1124M	possibly damaging	Het
Fam8a1	A	T	13: 46,824,723 (GRCm39)	M237L	probably benign	Het
Fars2	G	T	13: 36,388,758 (GRCm39)	K82N	probably benign	Het
Gm40460	ACCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAG	ACCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAGCCACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAGGAACTACAGCCTCCCTTGCAGCCCCCACAG	7: 141,794,450 (GRCm39)		probably benign	Het
Gm57858	T	A	3: 36,101,025 (GRCm39)	Q49L	probably damaging	Het
Gnat3	A	G	5: 18,208,770 (GRCm39)	D158G		Het
Grhl2	A	C	15: 37,328,574 (GRCm39)	N400T	probably damaging	Het
Grin2c	A	T	11: 115,147,085 (GRCm39)		probably null	Het
Hipk4	A	G	7: 27,222,973 (GRCm39)	Y11C	probably damaging	Het
Hspa9	G	T	18: 35,071,740 (GRCm39)	A620E	not run	Het
Igkv12-89	A	G	6: 68,812,083 (GRCm39)	S29P	probably benign	Het
Itga8	A	T	2: 12,113,998 (GRCm39)	D1039E	probably damaging	Het
Itgae	A	T	11: 73,004,457 (GRCm39)	D248V	probably damaging	Het
Kmt2c	T	C	5: 25,520,093 (GRCm39)	K2006E	probably damaging	Het
Litafd	C	T	16: 8,501,510 (GRCm39)	P59L	unknown	Het
Mdga1	C	T	17: 30,051,353 (GRCm39)	G934R	probably benign	Het
Mov10	T	C	3: 104,703,201 (GRCm39)	N896S	probably benign	Het
Nlk	T	C	11: 78,481,831 (GRCm39)		probably null	Het
Notch2	T	A	3: 98,053,939 (GRCm39)	S2201T	probably damaging	Het
Or5i1	A	T	2: 87,613,778 (GRCm39)	D298V	probably damaging	Het
Pank1	A	C	19: 34,799,388 (GRCm39)		probably null	Het
Pdlim3	T	C	8: 46,362,102 (GRCm39)	F126S	probably damaging	Het
Pds5a	C	A	5: 65,795,947 (GRCm39)	G648C	probably benign	Het
Plekhh3	T	C	11: 101,055,153 (GRCm39)	I567V	unknown	Het
Ppfia2	T	C	10: 106,701,264 (GRCm39)		probably null	Het
Prl3d1	A	G	13: 27,284,052 (GRCm39)	D207G	probably damaging	Het
Prss23	T	A	7: 89,159,454 (GRCm39)	D205V	probably benign	Het
Pygl	C	T	12: 70,244,569 (GRCm39)		probably null	Het
Qsox2	A	G	2: 26,111,032 (GRCm39)	F111S	probably damaging	Het
Sart3	T	C	5: 113,909,413 (GRCm39)	N95S	probably benign	Het
Scpep1	A	G	11: 88,820,046 (GRCm39)	F414S	probably damaging	Het
Selenbp1	C	A	3: 94,844,659 (GRCm39)	Y105*	probably null	Het
Sirpa	A	G	2: 129,458,365 (GRCm39)	D327G	probably benign	Het
Sowahc	G	A	10: 59,058,005 (GRCm39)	R47H	probably damaging	Het
Szt2	T	C	4: 118,251,025 (GRCm39)	Y361C	probably damaging	Het
Taf3	A	G	2: 9,945,804 (GRCm39)	V600A	probably benign	Het
Tie1	T	C	4: 118,330,175 (GRCm39)	I1042M	probably damaging	Het
Tmem132e	T	A	11: 82,325,342 (GRCm39)	L114Q	probably damaging	Het
Tmx3	A	G	18: 90,555,233 (GRCm39)	T317A	probably damaging	Het
Tppp3	A	G	8: 106,194,924 (GRCm39)	V69A	probably benign	Het
Tpr	T	C	1: 150,299,267 (GRCm39)	Y1156H	probably damaging	Het
Trank1	A	C	9: 111,194,364 (GRCm39)	D796A	possibly damaging	Het
Tsc2	G	A	17: 24,826,466 (GRCm39)	P928S	probably benign	Het
Unc80	G	T	1: 66,711,843 (GRCm39)	V2722F	possibly damaging	Het
Vmn1r199	G	T	13: 22,566,845 (GRCm39)	L46F	probably benign	Het
Vps13a	A	T	19: 16,727,513 (GRCm39)	H196Q	probably benign	Het
Wnt10a	T	A	1: 74,832,633 (GRCm39)	C75*	probably null	Het
Zfp335	A	G	2: 164,734,459 (GRCm39)		probably null	Het

Other mutations in Ndufb6

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R5748:Ndufb6	UTSW	4	40,279,234 (GRCm39)	missense	probably damaging	1.00
R7131:Ndufb6	UTSW	4	40,279,336 (GRCm39)	start codon destroyed	probably null	0.94
R7395:Ndufb6	UTSW	4	40,277,730 (GRCm39)	missense	probably damaging	0.99
R8165:Ndufb6	UTSW	4	40,270,665 (GRCm39)	splice site	probably null

Predicted Primers

PCR Primer
(F):5'- TCTGTGTAAGTTACAGGGTTAGAA -3'
(R):5'- TGCTATGTTTTACATCATGCCAG -3'

Sequencing Primer
(F):5'- GAACTCTGGGCGCATATT -3'
(R):5'- TTAATTGGACCTCTCTGCAGAG -3'

Posted On

2020-02-24