Mutagenetix > Incidental Mutation

Incidental Mutation 'R8791:Clvs1'

670933

Institutional Source

Beutler Lab

Gene Symbol

Clvs1

Ensembl Gene

ENSMUSG00000041216

Gene Name

clavesin 1

Synonyms

4933402J24Rik, Rlbp1l1

MMRRC Submission

068609-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8791 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

9269293-9451691 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 9429807 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 270 (E270G)

Ref Sequence

ENSEMBL: ENSMUSP00000035649 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000038841] [ENSMUST00000108348]

AlphaFold

Q9D4C9

Predicted Effect

probably damaging
Transcript: ENSMUST00000038841
AA Change: E270G

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000035649
Gene: ENSMUSG00000041216
AA Change: E270G

Domain	Start	End	E-Value	Type
low complexity region	3	14	N/A	INTRINSIC
CRAL_TRIO_N	72	97	5.34e-6	SMART
SEC14	118	276	1.98e-36	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000108348
AA Change: E270G

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000103985
Gene: ENSMUSG00000041216
AA Change: E270G

Domain	Start	End	E-Value	Type
low complexity region	3	14	N/A	INTRINSIC
CRAL_TRIO_N	72	97	5.34e-6	SMART
SEC14	118	276	1.98e-36	SMART

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

100% (47/47)

Allele List at MGI

Other mutations in this stock

Total: 47 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4931422A03Rik	G	T	2: 103,823,022 (GRCm39)	T87K	possibly damaging	Het
Adar	G	A	3: 89,643,445 (GRCm39)	R442Q	probably benign	Het
Agtr1b	T	A	3: 20,370,280 (GRCm39)	S109C	probably damaging	Het
Akr1c6	T	A	13: 4,499,373 (GRCm39)	Y248N	probably benign	Het
Alpk2	A	T	18: 65,438,597 (GRCm39)	V932E	probably benign	Het
Apba3	T	A	10: 81,105,104 (GRCm39)	S126T	probably benign	Het
Brca2	T	A	5: 150,466,061 (GRCm39)	S1942T	possibly damaging	Het
Ccdc149	C	T	5: 52,596,552 (GRCm39)	C20Y	probably damaging	Het
Cd63	C	A	10: 128,748,071 (GRCm39)	N156K	probably benign	Het
Cplane1	A	G	15: 8,216,744 (GRCm39)	Y654C	probably damaging	Het
Dgki	A	T	6: 36,996,875 (GRCm39)	D574E	probably damaging	Het
Esrrb	A	G	12: 86,517,056 (GRCm39)	S63G	probably damaging	Het
Exoc1	C	T	5: 76,683,412 (GRCm39)	R46C	probably damaging	Het
Fcgr4	C	A	1: 170,847,477 (GRCm39)	A25D	probably damaging	Het
Fgf4	T	C	7: 144,415,408 (GRCm39)	V56A	probably benign	Het
Gfpt2	A	G	11: 49,714,043 (GRCm39)	I267V	probably benign	Het
Gm20939	A	C	17: 95,184,648 (GRCm39)	H432P	probably damaging	Het
Gpr179	A	T	11: 97,242,739 (GRCm39)	L35Q	probably damaging	Het
Idh1	CA	CAA	1: 65,204,347 (GRCm39)		probably null	Het
Ildr1	T	C	16: 36,528,762 (GRCm39)	I69T	probably damaging	Het
Lrfn1	A	G	7: 28,159,344 (GRCm39)	D421G	probably benign	Het
Mmp15	C	T	8: 96,096,288 (GRCm39)	Q360*	probably null	Het
Nfatc2	T	C	2: 168,378,214 (GRCm39)	K484E	probably damaging	Het
Nkpd1	G	C	7: 19,258,095 (GRCm39)	V625L	probably benign	Het
Nlrp4a	C	A	7: 26,143,561 (GRCm39)		probably benign	Het
Nme9	T	A	9: 99,350,301 (GRCm39)	I178N	probably damaging	Het
Nrp2	C	T	1: 62,788,356 (GRCm39)	T352I	probably damaging	Het
Ntrk1	T	C	3: 87,686,990 (GRCm39)	I723V	probably damaging	Het
Or5p50	C	T	7: 107,422,557 (GRCm39)	V40M	possibly damaging	Het
Pias3	C	A	3: 96,612,201 (GRCm39)	Q553K	probably benign	Het
Pnp2	T	G	14: 51,200,873 (GRCm39)	H119Q	probably benign	Het
Rapgef6	T	A	11: 54,459,295 (GRCm39)	D156E	probably benign	Het
Rint1	T	C	5: 24,005,594 (GRCm39)	V92A	probably damaging	Het
Rnf148	A	T	6: 23,654,993 (GRCm39)	M1K	probably null	Het
Rnh1	C	T	7: 140,742,346 (GRCm39)	R404H	probably benign	Het
Slc4a8	T	C	15: 100,705,134 (GRCm39)	V832A	possibly damaging	Het
Snx31	A	T	15: 36,537,678 (GRCm39)	C167S	probably benign	Het
Spart	A	G	3: 55,029,100 (GRCm39)	D297G	probably benign	Het
Spata13	C	T	14: 60,929,275 (GRCm39)	R278C	probably damaging	Het
Tmc1	T	C	19: 20,767,209 (GRCm39)	T716A	probably benign	Het
Tpi1	A	G	6: 124,789,483 (GRCm39)	V164A	probably damaging	Het
Trim17	A	G	11: 58,862,002 (GRCm39)	S345G	probably benign	Het
Vmn1r199	T	A	13: 22,567,687 (GRCm39)	L327Q	probably damaging	Het
Washc4	C	T	10: 83,386,748 (GRCm39)	T124I	probably benign	Het
Wdr76	C	T	2: 121,357,484 (GRCm39)	T180I	probably benign	Het
Zcchc8	T	C	5: 123,845,362 (GRCm39)	N333D	probably benign	Het
Zfp516	T	C	18: 82,975,460 (GRCm39)	S553P	probably damaging	Het

Other mutations in Clvs1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00233:Clvs1	APN	4	9,281,939 (GRCm39)	missense	probably damaging	1.00
IGL01293:Clvs1	APN	4	9,281,559 (GRCm39)	start codon destroyed	probably null
IGL01463:Clvs1	APN	4	9,429,818 (GRCm39)	missense	probably benign	0.27
IGL03031:Clvs1	APN	4	9,449,385 (GRCm39)	splice site	probably benign
R0472:Clvs1	UTSW	4	9,281,801 (GRCm39)	missense	probably damaging	1.00
R0496:Clvs1	UTSW	4	9,424,241 (GRCm39)	missense	probably damaging	1.00
R0848:Clvs1	UTSW	4	9,282,003 (GRCm39)	missense	possibly damaging	0.83
R1541:Clvs1	UTSW	4	9,281,814 (GRCm39)	missense	probably benign	0.00
R1992:Clvs1	UTSW	4	9,281,899 (GRCm39)	missense	probably benign	0.01
R2901:Clvs1	UTSW	4	9,281,972 (GRCm39)	missense	probably damaging	0.96
R2902:Clvs1	UTSW	4	9,281,972 (GRCm39)	missense	probably damaging	0.96
R4321:Clvs1	UTSW	4	9,282,029 (GRCm39)	intron	probably benign
R4934:Clvs1	UTSW	4	9,424,216 (GRCm39)	missense	possibly damaging	0.91
R4946:Clvs1	UTSW	4	9,281,831 (GRCm39)	nonsense	probably null
R4970:Clvs1	UTSW	4	9,350,857 (GRCm39)	intron	probably benign
R5187:Clvs1	UTSW	4	9,281,865 (GRCm39)	missense	possibly damaging	0.53
R5327:Clvs1	UTSW	4	9,424,261 (GRCm39)	missense	probably damaging	1.00
R5605:Clvs1	UTSW	4	9,281,751 (GRCm39)	missense	probably damaging	0.98
R5940:Clvs1	UTSW	4	9,449,443 (GRCm39)	missense	possibly damaging	0.96
R6818:Clvs1	UTSW	4	9,282,014 (GRCm39)	critical splice donor site	probably null
R6857:Clvs1	UTSW	4	9,449,433 (GRCm39)	missense	probably benign	0.00
R7692:Clvs1	UTSW	4	9,350,739 (GRCm39)	missense	probably benign	0.23
R8247:Clvs1	UTSW	4	9,281,885 (GRCm39)	missense	possibly damaging	0.77
R9500:Clvs1	UTSW	4	9,429,834 (GRCm39)	missense	probably damaging	0.98

Predicted Primers

PCR Primer
(F):5'- TTTGAACACCATGGCCACC -3'
(R):5'- GCCACAGTAAGATCTAACTAGAGGC -3'

Sequencing Primer
(F):5'- CACCAGAGGCATTTCCAATTTG -3'
(R):5'- GATCTAACTAGAGGCTCTCATGC -3'

Posted On

2021-04-30