Mutagenetix > Incidental Mutations

Incidental Mutation 'R2507:Stk35'

251279

Institutional Source

Beutler Lab

Gene Symbol

Stk35

Ensembl Gene

ENSMUSG00000037885

Gene Name

serine/threonine kinase 35

Synonyms

1700054C12Rik, CLIK1, CLP-36 interacting kinase

MMRRC Submission

040413-MU

Accession Numbers

Is this an essential gene?

Non essential (E-score: 0.000) question?

Stock #

R2507 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

129800517-129832287 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 129801515 bp

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 140 (T140A)

Ref Sequence

ENSEMBL: ENSMUSP00000132862 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000165413] [ENSMUST00000166282]

Predicted Effect

probably damaging
Transcript: ENSMUST00000165413
AA Change: T140A

PolyPhen 2 Score 0.966 (Sensitivity: 0.77; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000126541
Gene: ENSMUSG00000037885
AA Change: T140A

Domain	Start	End	E-Value	Type
low complexity region	51	69	N/A	INTRINSIC
low complexity region	115	137	N/A	INTRINSIC
low complexity region	190	206	N/A	INTRINSIC
Pfam:Pkinase_Tyr	207	295	2e-6	PFAM
Pfam:Pkinase	207	531	8.6e-51	PFAM
Pfam:Pkinase_Tyr	304	532	2.1e-23	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000166282
AA Change: T140A

PolyPhen 2 Score 0.966 (Sensitivity: 0.77; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000132862
Gene: ENSMUSG00000037885
AA Change: T140A

Domain	Start	End	E-Value	Type
low complexity region	51	69	N/A	INTRINSIC
low complexity region	115	137	N/A	INTRINSIC
low complexity region	190	206	N/A	INTRINSIC
Pfam:Pkinase_Tyr	207	300	5.9e-7	PFAM
Pfam:Pkinase	207	311	1e-9	PFAM

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.2%
20x: 94.7%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a kinase that is predominantly found in the nucleus. However, it can interact with PDLIM1/CLP-36 in the cytoplasm and localize to actin stress fibers. The encoded protein may be a regulator of actin stress fibers in nonmuscle cells. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 77 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700020N01Rik	A	G	10: 21,621,782		probably benign	Het
4930535I16Rik	G	A	4: 123,917,947		probably benign	Het
Akr1b3	C	T	6: 34,310,064	E186K	probably damaging	Het
Apc	A	T	18: 34,316,537	N2128I	possibly damaging	Het
Api5	T	C	2: 94,429,817	I31M	probably damaging	Het
Armcx4	T	G	X: 134,695,379	V2012G	possibly damaging	Het
Aurka	T	C	2: 172,370,445	E4G	probably benign	Het
B4galt5	T	A	2: 167,306,638	M187L	probably benign	Het
Bsn	T	C	9: 108,116,114	D813G	probably damaging	Het
Bub1	A	T	2: 127,801,423	D1000E	probably benign	Het
C87499	T	A	4: 88,629,211	K161N	possibly damaging	Het
Cacna1f	T	G	X: 7,626,448		probably null	Het
Cdh6	A	G	15: 13,041,361	I539T	probably benign	Het
Cdhr3	T	C	12: 33,038,915	D756G	probably benign	Het
Cenph	A	T	13: 100,771,236	D85E	probably benign	Het
Chd9	C	T	8: 91,033,987	P2120L	probably benign	Het
Clec2h	A	G	6: 128,673,982	N75S	probably benign	Het
Cnga1	C	T	5: 72,619,061	V20I	possibly damaging	Het
Cox4i1	T	A	8: 120,673,290	V51E	possibly damaging	Het
Cpne3	A	T	4: 19,553,871	N53K	probably damaging	Het
Cpt1b	A	G	15: 89,419,098	F585L	probably benign	Het
Daam1	G	A	12: 71,975,223	D732N	probably damaging	Het
Dner	A	T	1: 84,583,080	C115S	probably damaging	Het
Dopey1	T	A	9: 86,513,117	F759Y	probably damaging	Het
Dst	T	C	1: 34,011,909	Y29H	probably damaging	Het
Dst	T	C	1: 34,188,417	V1875A	possibly damaging	Het
Duox1	A	G	2: 122,333,138	D817G	probably benign	Het
Emc2	A	T	15: 43,511,698		probably null	Het
Erich3	A	T	3: 154,698,659	E51V	probably null	Het
Exoc2	A	G	13: 30,882,365	Y443H	possibly damaging	Het
Fbf1	T	C	11: 116,155,426	R200G	probably benign	Het
Fdxr	G	A	11: 115,271,980	T100I	probably damaging	Het
Galnt11	C	G	5: 25,247,612	P41A	probably damaging	Het
Galnt4	A	G	10: 99,109,286	K291R	possibly damaging	Het
Gm12695	T	A	4: 96,754,189	E301V	probably damaging	Het
Gopc	C	T	10: 52,353,326		probably null	Het
Gria1	A	T	11: 57,289,320	T699S	probably null	Het
Gsr	T	G	8: 33,680,288	D200E	probably benign	Het
Ikzf2	G	A	1: 69,539,288	A282V	probably benign	Het
Irak2	T	C	6: 113,647,678	I45T	probably damaging	Het
Irx1	T	C	13: 71,959,820	K248E	probably damaging	Het
Kcns3	A	C	12: 11,092,086	V204G	possibly damaging	Het
Lmo1	C	A	7: 109,140,641	M91I	probably damaging	Het
Map3k21	A	G	8: 125,939,938	D623G	possibly damaging	Het
Map4	A	G	9: 110,037,483		probably benign	Het
Mark3	T	A	12: 111,627,242	V236E	probably damaging	Het
Med23	A	G	10: 24,910,813	D939G	probably damaging	Het
Mrgpra9	A	G	7: 47,235,494	C142R	possibly damaging	Het
N4bp2	T	A	5: 65,790,061	D11E	probably benign	Het
Ntng2	T	C	2: 29,207,519	N310S	probably damaging	Het
Olfr1328	T	C	4: 118,933,925	M308V	probably benign	Het
Olfr1414	A	G	1: 92,511,378	S217P	probably damaging	Het
Pcolce	A	G	5: 137,607,051	V260A	possibly damaging	Het
Pds5b	C	A	5: 150,756,428	T533K	possibly damaging	Het
Pecr	A	G	1: 72,261,976	Y268H	probably benign	Het
Phax	T	A	18: 56,586,884	F299Y	probably damaging	Het
Phip	T	C	9: 82,915,339	H537R	possibly damaging	Het
Prpf39	T	A	12: 65,057,815	F551L	probably benign	Het
Ptch1	T	G	13: 63,524,959	E944A	probably benign	Het
Ralgapa1	G	A	12: 55,718,201	P889S	probably damaging	Het
Rpap1	A	G	2: 119,780,054		probably null	Het
Rufy3	T	C	5: 88,649,898	S645P	probably damaging	Het
Samd1	CGAGGAGGAGGAGGAGGAGGA	CGAGGAGGAGGAGGAGGA	8: 83,998,996		probably benign	Het
Spata7	G	T	12: 98,658,450	A172S	probably benign	Het
Thop1	T	G	10: 81,070,264	M1R	probably null	Het
Tlr1	T	C	5: 64,925,296	Y646C	probably damaging	Het
Tpp2	A	G	1: 44,001,449	Y290C	probably benign	Het
Tpr	A	G	1: 150,392,944	M1V	probably null	Het
Trim6	T	C	7: 104,228,185	F161L	probably damaging	Het
Ubash3b	T	C	9: 41,157,354	K25E	possibly damaging	Het
Unc45b	G	A	11: 82,940,137		probably null	Het
Unc80	A	G	1: 66,612,107	N1537S	possibly damaging	Het
Usb1	T	C	8: 95,343,124	F100S	probably damaging	Het
Vmn1r17	C	A	6: 57,361,259	L40F	probably damaging	Het
Vmn1r233	A	T	17: 20,993,848	M280K	probably benign	Het
Zfp37	A	T	4: 62,191,256	C524S	probably damaging	Het
Zfp426	T	C	9: 20,470,431	K420R	probably benign	Het

Other mutations in Stk35

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00850:Stk35	APN	2	129801992	missense	probably damaging	1.00
IGL02609:Stk35	APN	2	129801801	missense	probably damaging	1.00
fingernails	UTSW	2	129810935	missense	probably damaging	1.00
skinned	UTSW	2	129811235	intron	probably benign
R0045:Stk35	UTSW	2	129800568	nonsense	probably null
R0306:Stk35	UTSW	2	129801763	nonsense	probably null
R0784:Stk35	UTSW	2	129810802	nonsense	probably null
R1536:Stk35	UTSW	2	129811235	intron	probably benign
R2256:Stk35	UTSW	2	129810507	nonsense	probably null
R2508:Stk35	UTSW	2	129801515	missense	probably damaging	0.97
R3848:Stk35	UTSW	2	129800736	missense	probably benign	0.13
R3872:Stk35	UTSW	2	129810575	missense	possibly damaging	0.82
R4466:Stk35	UTSW	2	129801516	missense	probably damaging	0.99
R5144:Stk35	UTSW	2	129810935	missense	probably damaging	1.00
R6267:Stk35	UTSW	2	129810888	nonsense	probably null
R6296:Stk35	UTSW	2	129810888	nonsense	probably null
R6480:Stk35	UTSW	2	129810687	missense	possibly damaging	0.95
R6807:Stk35	UTSW	2	129801653	missense	probably damaging	0.97
R7203:Stk35	UTSW	2	129801593	missense	probably benign
R7476:Stk35	UTSW	2	129810725	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CCGGACGCTTTAAGTTCCTC -3'
(R):5'- ATAAACCACGCCGTAGCTG -3'

Sequencing Primer
(F):5'- GGACGCTTTAAGTTCCTCATCTAC -3'
(R):5'- TGCAGGAACATCCCCGC -3'

Posted On

2014-12-04