Mutagenetix > Incidental Mutation

Incidental Mutation 'R5834:Vmn1r238'

449511

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r238

Ensembl Gene

ENSMUSG00000091539

Gene Name

vomeronasal 1 receptor, 238

Synonyms

MMRRC Submission

044055-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.055) question?

Stock #

R5834 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

3122492-3123412 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 3123168 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 82 (E82G)

Ref Sequence

ENSEMBL: ENSMUSP00000129804 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000165255]

AlphaFold

E9Q373

Predicted Effect

probably benign
Transcript: ENSMUST00000165255
AA Change: E82G

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000129804
Gene: ENSMUSG00000091539
AA Change: E82G

Domain	Start	End	E-Value	Type
Pfam:TAS2R	7	302	5.3e-8	PFAM
Pfam:7tm_1	27	292	8.8e-7	PFAM
Pfam:V1R	34	298	1.9e-33	PFAM

Coding Region Coverage

1x: 99.9%
3x: 99.7%
10x: 98.8%
20x: 96.7%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 73 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4931428F04Rik	G	A	8: 105,282,123 (GRCm38)	Q421*	probably null	Het
Abca13	T	C	11: 9,277,974 (GRCm38)		probably null	Het
Adamts20	A	C	15: 94,353,584 (GRCm38)	S441A	probably damaging	Het
Aen	T	A	7: 78,907,301 (GRCm38)	M299K	probably damaging	Het
Akap3	T	C	6: 126,865,833 (GRCm38)	S472P	probably benign	Het
Ank3	T	G	10: 69,822,257 (GRCm38)	V158G	probably damaging	Het
Arfgap1	A	G	2: 180,981,162 (GRCm38)	D324G	probably benign	Het
Aste1	A	T	9: 105,403,415 (GRCm38)	R448S	probably benign	Het
Atp10a	T	A	7: 58,658,618 (GRCm38)	L55Q	probably benign	Het
C1qtnf9	G	A	14: 60,779,450 (GRCm38)	G143D	probably damaging	Het
Camsap2	A	G	1: 136,280,388 (GRCm38)	V1122A	probably benign	Het
Cbl	T	C	9: 44,233,779 (GRCm38)	H37R	probably damaging	Het
Cfap61	A	C	2: 146,129,149 (GRCm38)	D893A	probably benign	Het
Chd2	T	A	7: 73,478,715 (GRCm38)	I841F	probably damaging	Het
Chd9	A	G	8: 90,997,164 (GRCm38)	T622A	probably damaging	Het
Cntnap3	A	G	13: 64,748,577 (GRCm38)	Y1028H	probably benign	Het
Crybg2	A	G	4: 134,074,123 (GRCm38)	T865A	probably benign	Het
Cyp2c55	A	G	19: 39,042,067 (GRCm38)	I448V	probably benign	Het
Cyth1	T	A	11: 118,192,463 (GRCm38)		probably null	Het
Dcaf13	C	T	15: 39,143,642 (GRCm38)	R324*	probably null	Het
Dhx37	C	A	5: 125,425,730 (GRCm38)	R42L	probably damaging	Het
Dock1	T	A	7: 134,763,933 (GRCm38)	V450E	probably damaging	Het
Ednrb	A	G	14: 103,820,877 (GRCm38)	L330P	probably damaging	Het
Eml4	T	A	17: 83,477,741 (GRCm38)	H778Q	probably damaging	Het
Evx1	T	A	6: 52,315,990 (GRCm38)	I227N	probably damaging	Het
G3bp1	T	A	11: 55,497,940 (GRCm38)	V326E	probably benign	Het
Gata2	T	C	6: 88,200,747 (GRCm38)	V253A	probably benign	Het
Gbp2	A	G	3: 142,633,377 (GRCm38)	N397D	probably damaging	Het
Gm14401	C	A	2: 177,086,903 (GRCm38)	H261N	probably benign	Het
Hacd4	A	T	4: 88,398,152 (GRCm38)	H243Q	probably benign	Het
Hsd3b1	C	A	3: 98,852,939 (GRCm38)	K245N	possibly damaging	Het
Hyls1	G	A	9: 35,561,184 (GRCm38)	S312F	probably benign	Het
Ift27	A	T	15: 78,165,243 (GRCm38)	C86S	probably damaging	Het
Iqgap2	C	T	13: 95,675,372 (GRCm38)	R707H	probably damaging	Het
Irs3	T	A	5: 137,644,559 (GRCm38)	S206C	probably damaging	Het
Lefty2	C	T	1: 180,893,151 (GRCm38)		probably benign	Het
Mark3	A	G	12: 111,624,487 (GRCm38)	I162V	probably damaging	Het
Mefv	A	C	16: 3,716,046 (GRCm38)	D120E	probably damaging	Het
Mep1a	G	A	17: 43,478,164 (GRCm38)	H574Y	probably benign	Het
Mre11a	A	G	9: 14,799,657 (GRCm38)	I45V	probably benign	Het
Mtor	A	G	4: 148,536,536 (GRCm38)	N1797S	possibly damaging	Het
Nav1	A	C	1: 135,532,406 (GRCm38)	M393R	probably benign	Het
Nod2	T	C	8: 88,664,639 (GRCm38)	S510P	possibly damaging	Het
Nos2	C	T	11: 78,928,579 (GRCm38)	T39I	probably benign	Het
Olfr474	T	A	7: 107,954,906 (GRCm38)	H88Q	probably benign	Het
Olfr93	A	T	17: 37,151,799 (GRCm38)	Y58N	probably damaging	Het
Pcdh7	A	G	5: 57,721,628 (GRCm38)	S842G	possibly damaging	Het
Pcdha11	T	C	18: 37,012,623 (GRCm38)	V589A	probably damaging	Het
Plaa	A	C	4: 94,583,469 (GRCm38)	V10G	probably damaging	Het
Pprc1	T	A	19: 46,065,220 (GRCm38)		probably benign	Het
Ptprt	T	C	2: 161,560,269 (GRCm38)	Y994C	probably damaging	Het
Ripply2	T	A	9: 87,015,890 (GRCm38)	W37R	probably damaging	Het
Rpgrip1	A	G	14: 52,158,382 (GRCm38)	D1227G	probably damaging	Het
Scoc	C	T	8: 83,437,631 (GRCm38)	D10N	possibly damaging	Het
Sdk2	A	T	11: 113,854,273 (GRCm38)	I732N	probably damaging	Het
Six2	T	C	17: 85,687,664 (GRCm38)	K97E	probably damaging	Het
Slit2	A	C	5: 48,259,647 (GRCm38)	N1014H	probably damaging	Het
Smc1b	A	C	15: 85,089,665 (GRCm38)	L930R	probably damaging	Het
Spag16	T	A	1: 69,923,714 (GRCm38)	M340K	probably benign	Het
Spata31	C	T	13: 64,922,666 (GRCm38)	S876L	probably benign	Het
Spen	A	G	4: 141,471,843 (GRCm38)	Y3135H	possibly damaging	Het
Spta1	A	T	1: 174,184,797 (GRCm38)		probably null	Het
Stk3	G	A	15: 34,959,018 (GRCm38)	T336I	probably damaging	Het
Tas2r118	T	A	6: 23,969,877 (GRCm38)	T62S	probably benign	Het
Tmprss11d	A	G	5: 86,306,310 (GRCm38)	M212T	probably damaging	Het
Trpc7	A	G	13: 56,776,158 (GRCm38)	L738P	probably damaging	Het
Ttll8	A	G	15: 88,917,246 (GRCm38)	V413A	possibly damaging	Het
Usb1	G	A	8: 95,333,533 (GRCm38)		probably benign	Het
Vmn2r114	T	C	17: 23,310,625 (GRCm38)	T168A	possibly damaging	Het
Vmn2r60	C	A	7: 42,116,508 (GRCm38)	P13H	probably benign	Het
Wdr26	A	G	1: 181,203,147 (GRCm38)	L194P	probably damaging	Het
Zfhx2	G	A	14: 55,073,330 (GRCm38)	Q636*	probably null	Het
Zfyve26	A	G	12: 79,266,537 (GRCm38)	Y25H	probably benign	Het

Other mutations in Vmn1r238

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00427:Vmn1r238	APN	18	3,123,243 (GRCm38)	missense	probably benign	0.01
IGL01385:Vmn1r238	APN	18	3,122,770 (GRCm38)	missense	possibly damaging	0.83
IGL02716:Vmn1r238	APN	18	3,123,124 (GRCm38)	missense	probably damaging	1.00
R1219:Vmn1r238	UTSW	18	3,123,135 (GRCm38)	missense	possibly damaging	0.81
R1568:Vmn1r238	UTSW	18	3,123,358 (GRCm38)	missense	probably benign	0.00
R1864:Vmn1r238	UTSW	18	3,123,040 (GRCm38)	nonsense	probably null
R3024:Vmn1r238	UTSW	18	3,123,305 (GRCm38)	missense	probably benign	0.13
R4291:Vmn1r238	UTSW	18	3,123,214 (GRCm38)	nonsense	probably null
R4304:Vmn1r238	UTSW	18	3,123,040 (GRCm38)	nonsense	probably null
R4586:Vmn1r238	UTSW	18	3,123,294 (GRCm38)	missense	probably damaging	1.00
R4664:Vmn1r238	UTSW	18	3,123,300 (GRCm38)	missense	probably damaging	0.99
R5123:Vmn1r238	UTSW	18	3,123,243 (GRCm38)	missense	probably benign
R5430:Vmn1r238	UTSW	18	3,122,521 (GRCm38)	missense	possibly damaging	0.63
R7186:Vmn1r238	UTSW	18	3,122,661 (GRCm38)	missense	probably damaging	0.99
R7206:Vmn1r238	UTSW	18	3,122,623 (GRCm38)	missense	possibly damaging	0.94
R7308:Vmn1r238	UTSW	18	3,122,875 (GRCm38)	missense	probably benign	0.09
R7346:Vmn1r238	UTSW	18	3,123,151 (GRCm38)	missense	probably damaging	1.00
R7467:Vmn1r238	UTSW	18	3,123,393 (GRCm38)	missense	probably benign	0.10
R7571:Vmn1r238	UTSW	18	3,122,721 (GRCm38)	missense	probably damaging	1.00
R7808:Vmn1r238	UTSW	18	3,123,033 (GRCm38)	missense	probably benign	0.03
R8085:Vmn1r238	UTSW	18	3,123,151 (GRCm38)	missense	probably damaging	1.00
R8086:Vmn1r238	UTSW	18	3,123,250 (GRCm38)	missense	probably damaging	1.00
R8325:Vmn1r238	UTSW	18	3,122,529 (GRCm38)	missense	probably benign	0.00
R8423:Vmn1r238	UTSW	18	3,123,365 (GRCm38)	nonsense	probably null
R8747:Vmn1r238	UTSW	18	3,123,232 (GRCm38)	missense	possibly damaging	0.87
R8930:Vmn1r238	UTSW	18	3,123,127 (GRCm38)	missense	probably benign	0.03
R8932:Vmn1r238	UTSW	18	3,123,127 (GRCm38)	missense	probably benign	0.03
R9279:Vmn1r238	UTSW	18	3,122,994 (GRCm38)	missense	probably damaging	0.99
R9382:Vmn1r238	UTSW	18	3,122,676 (GRCm38)	missense	probably damaging	0.99
R9644:Vmn1r238	UTSW	18	3,122,635 (GRCm38)	missense	probably benign	0.10
R9725:Vmn1r238	UTSW	18	3,122,577 (GRCm38)	missense	probably benign	0.00
Z1177:Vmn1r238	UTSW	18	3,122,505 (GRCm38)	missense	probably benign	0.00

Predicted Primers

Posted On

2016-12-20