Incidental Mutation 'R9130:Rb1cc1'
ID 693508
Institutional Source Beutler Lab
Gene Symbol Rb1cc1
Ensembl Gene ENSMUSG00000025907
Gene Name RB1-inducible coiled-coil 1
Synonyms Fip200, 2900055E04Rik, 5930404L04Rik, Cc1, LaXp180
MMRRC Submission 068928-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R9130 (G1)
Quality Score 225.009
Status Validated
Chromosome 1
Chromosomal Location 6284858-6346599 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 6315109 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Valine at position 421 (I421V)
Ref Sequence ENSEMBL: ENSMUSP00000027040 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000027040] [ENSMUST00000162795]
AlphaFold Q9ESK9
Predicted Effect probably damaging
Transcript: ENSMUST00000027040
AA Change: I421V

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000027040
Gene: ENSMUSG00000025907
AA Change: I421V

DomainStartEndE-ValueType
SCOP:d1euvb_ 1 51 7e-4 SMART
Blast:UBQ 3 76 8e-12 BLAST
low complexity region 471 486 N/A INTRINSIC
low complexity region 643 653 N/A INTRINSIC
low complexity region 658 674 N/A INTRINSIC
coiled coil region 859 921 N/A INTRINSIC
low complexity region 1033 1045 N/A INTRINSIC
low complexity region 1055 1066 N/A INTRINSIC
SCOP:d1eq1a_ 1159 1305 1e-3 SMART
low complexity region 1374 1388 N/A INTRINSIC
Pfam:ATG11 1447 1583 5.6e-28 PFAM
Predicted Effect
SMART Domains Protein: ENSMUSP00000125348
Gene: ENSMUSG00000025907
AA Change: I300V

DomainStartEndE-ValueType
low complexity region 351 366 N/A INTRINSIC
low complexity region 523 533 N/A INTRINSIC
low complexity region 538 554 N/A INTRINSIC
coiled coil region 738 800 N/A INTRINSIC
low complexity region 913 925 N/A INTRINSIC
low complexity region 935 946 N/A INTRINSIC
SCOP:d1eq1a_ 1039 1174 3e-3 SMART
low complexity region 1254 1268 N/A INTRINSIC
Pfam:ATG11 1327 1463 6.7e-28 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000162257
SMART Domains Protein: ENSMUSP00000125334
Gene: ENSMUSG00000025907

DomainStartEndE-ValueType
coiled coil region 33 331 N/A INTRINSIC
low complexity region 335 355 N/A INTRINSIC
coiled coil region 363 483 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000162795
AA Change: I421V

PolyPhen 2 Score 0.049 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000124676
Gene: ENSMUSG00000025907
AA Change: I421V

DomainStartEndE-ValueType
SCOP:d1euvb_ 1 51 2e-4 SMART
Blast:UBQ 3 76 4e-12 BLAST
low complexity region 454 469 N/A INTRINSIC
low complexity region 626 636 N/A INTRINSIC
low complexity region 641 657 N/A INTRINSIC
coiled coil region 842 865 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.2%
Validation Efficiency 99% (87/88)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene interacts with signaling pathways to coordinately regulate cell growth, cell proliferation, apoptosis, autophagy, and cell migration. This tumor suppressor also enhances retinoblastoma 1 gene expression in cancer cells. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Nov 2009]
PHENOTYPE: Homozygous mutation of this gene results in embryonic lethality at mid/late gestation associated with heart failure and liver degeneration. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 90 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abr A G 11: 76,342,753 (GRCm39) C585R possibly damaging Het
Acaca T C 11: 84,202,145 (GRCm39) L1380S probably damaging Het
Aifm2 A C 10: 61,563,505 (GRCm39) Q125P probably null Het
Ak5 A T 3: 152,178,569 (GRCm39) L482* probably null Het
Aldh3a2 T C 11: 61,139,758 (GRCm39) Q458R probably benign Het
Ank2 G A 3: 126,810,565 (GRCm39) T524I Het
Apoc3 A T 9: 46,146,481 (GRCm39) S25T unknown Het
Ash1l A T 3: 88,965,848 (GRCm39) R2417* probably null Het
Bbs12 A G 3: 37,373,205 (GRCm39) probably benign Het
Birc6 T A 17: 74,919,146 (GRCm39) I1992N Het
Brd9 G A 13: 74,092,906 (GRCm39) V299M probably damaging Het
Brwd1 A T 16: 95,866,130 (GRCm39) N217K probably damaging Het
C3 T C 17: 57,518,678 (GRCm39) Y1235C probably damaging Het
Cacna1c T C 6: 118,590,907 (GRCm39) Y1538C Het
Ccdc172 T A 19: 58,525,779 (GRCm39) H212Q possibly damaging Het
Cdc6 A G 11: 98,802,999 (GRCm39) D313G probably damaging Het
Cyp2e1 T C 7: 140,353,022 (GRCm39) V353A probably damaging Het
Dlg2 G T 7: 92,080,258 (GRCm39) V711F probably damaging Het
Dmac2 T C 7: 25,320,448 (GRCm39) F49S probably damaging Het
Dnah7b A G 1: 46,173,674 (GRCm39) K660E probably benign Het
Dusp8 A T 7: 141,642,155 (GRCm39) S106T probably benign Het
Dynll1 T A 5: 115,438,604 (GRCm39) I34F probably benign Het
Epb41l4b A G 4: 57,103,447 (GRCm39) F130L possibly damaging Het
Erc2 T C 14: 27,751,418 (GRCm39) Y705H probably benign Het
Exosc8 T A 3: 54,638,503 (GRCm39) L160F probably damaging Het
F5 A G 1: 164,001,830 (GRCm39) T178A probably benign Het
F7 C A 8: 13,085,059 (GRCm39) P362T probably damaging Het
Fkbp3 T C 12: 65,112,567 (GRCm39) K156E possibly damaging Het
Folh1 G A 7: 86,368,913 (GRCm39) T738I probably benign Het
Gatad2b C T 3: 90,255,936 (GRCm39) A134V probably benign Het
Glud1 T A 14: 34,057,349 (GRCm39) W338R Het
Gm21149 T C 5: 15,680,261 (GRCm39) K62E possibly damaging Het
Gm32742 A G 9: 51,050,049 (GRCm39) Y1517H probably damaging Het
Grik5 G A 7: 24,767,429 (GRCm39) probably benign Het
Gse1 A T 8: 121,295,052 (GRCm39) E391V unknown Het
Gxylt2 C T 6: 100,710,329 (GRCm39) Q157* probably null Het
Hbq1b C T 11: 32,237,092 (GRCm39) T27I probably damaging Het
Hoxd13 T A 2: 74,499,382 (GRCm39) D243E probably benign Het
Hsd3b3 T A 3: 98,651,211 (GRCm39) I80F possibly damaging Het
Hsf2bp A T 17: 32,230,082 (GRCm39) probably benign Het
Itch G A 2: 155,052,045 (GRCm39) probably benign Het
Kat14 T C 2: 144,215,742 (GRCm39) F76L probably benign Het
Kdm6b T C 11: 69,295,424 (GRCm39) T948A unknown Het
Kmt2c A T 5: 25,516,102 (GRCm39) H2580Q probably benign Het
Lrp1 T C 10: 127,382,281 (GRCm39) T3727A probably benign Het
Lrrc8a A G 2: 30,147,042 (GRCm39) I619V possibly damaging Het
Mansc1 C A 6: 134,586,951 (GRCm39) G409W probably damaging Het
Map3k11 C A 19: 5,746,038 (GRCm39) L418I possibly damaging Het
Mettl4 T A 17: 95,042,913 (GRCm39) I308L possibly damaging Het
Myo9a A G 9: 59,739,514 (GRCm39) D742G probably damaging Het
Mypn T C 10: 63,028,652 (GRCm39) Q137R probably benign Het
Neurod4 A T 10: 130,106,427 (GRCm39) Y282* probably null Het
Nup210 A G 6: 91,020,799 (GRCm39) F965S probably benign Het
Oplah T C 15: 76,185,098 (GRCm39) T872A possibly damaging Het
Or1ab2 G T 8: 72,863,697 (GRCm39) G96C probably damaging Het
Or4b12 A G 2: 90,096,358 (GRCm39) C139R probably damaging Het
Or5m8 T G 2: 85,822,819 (GRCm39) Y219* probably null Het
Or6c68 A G 10: 129,157,897 (GRCm39) N135S probably benign Het
Pkn2 A T 3: 142,515,245 (GRCm39) D696E possibly damaging Het
Pla2r1 A T 2: 60,325,729 (GRCm39) probably benign Het
Plpp1 A T 13: 112,988,038 (GRCm39) I54L Het
Ppp4r2 T G 6: 100,842,113 (GRCm39) N191K probably damaging Het
Ptpdc1 G T 13: 48,739,655 (GRCm39) P592Q probably benign Het
Qrich2 A T 11: 116,347,692 (GRCm39) L1044* probably null Het
Ripor3 A T 2: 167,823,267 (GRCm39) C881* probably null Het
Rreb1 T C 13: 38,114,282 (GRCm39) F547S probably benign Het
Scel T C 14: 103,770,746 (GRCm39) V60A probably benign Het
Shank3 G A 15: 89,442,419 (GRCm39) A1771T probably benign Het
Slc6a20a A G 9: 123,469,631 (GRCm39) probably null Het
Slfn5 C T 11: 82,851,446 (GRCm39) T581I probably damaging Het
Ssh3 A C 19: 4,314,113 (GRCm39) V412G probably damaging Het
Stx17 T G 4: 48,159,071 (GRCm39) probably benign Het
Sun3 T G 11: 8,968,170 (GRCm39) T274P probably benign Het
Tm9sf1 T C 14: 55,875,464 (GRCm39) T427A probably damaging Het
Tmem114 T A 16: 8,229,983 (GRCm39) I140F Het
Tmem40 T C 6: 115,710,980 (GRCm39) R167G possibly damaging Het
Top3a C A 11: 60,641,401 (GRCm39) probably null Het
Trafd1 A G 5: 121,516,573 (GRCm39) V210A probably benign Het
Trim66 T C 7: 109,076,896 (GRCm39) I348V possibly damaging Het
Ttn G A 2: 76,679,172 (GRCm39) A10850V unknown Het
Unc80 G A 1: 66,677,244 (GRCm39) A2058T possibly damaging Het
Upp2 T C 2: 58,668,020 (GRCm39) Y238H probably damaging Het
Vmn1r224 T A 17: 20,640,242 (GRCm39) I273N probably damaging Het
Vps13c T C 9: 67,836,805 (GRCm39) S1768P probably damaging Het
Zfp26 G A 9: 20,348,723 (GRCm39) H614Y probably damaging Het
Zfp263 C T 16: 3,567,701 (GRCm39) T672I probably benign Het
Zfp641 T A 15: 98,186,732 (GRCm39) Q297L probably benign Het
Zfp944 T C 17: 22,560,031 (GRCm39) E25G probably damaging Het
Zfp994 T C 17: 22,418,981 (GRCm39) E656G unknown Het
Zfyve19 A G 2: 119,045,330 (GRCm39) D206G probably damaging Het
Other mutations in Rb1cc1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00489:Rb1cc1 APN 1 6,319,730 (GRCm39) missense probably damaging 0.97
IGL00590:Rb1cc1 APN 1 6,308,520 (GRCm39) missense probably damaging 1.00
IGL00678:Rb1cc1 APN 1 6,304,309 (GRCm39) missense probably damaging 1.00
IGL00705:Rb1cc1 APN 1 6,314,357 (GRCm39) missense probably benign 0.00
IGL00957:Rb1cc1 APN 1 6,319,763 (GRCm39) missense probably damaging 1.00
IGL01363:Rb1cc1 APN 1 6,320,333 (GRCm39) missense probably benign 0.06
IGL01599:Rb1cc1 APN 1 6,318,995 (GRCm39) nonsense probably null
IGL01610:Rb1cc1 APN 1 6,318,705 (GRCm39) missense probably benign 0.03
IGL01929:Rb1cc1 APN 1 6,310,383 (GRCm39) missense possibly damaging 0.82
IGL01978:Rb1cc1 APN 1 6,308,592 (GRCm39) missense probably damaging 1.00
IGL02312:Rb1cc1 APN 1 6,335,847 (GRCm39) critical splice donor site probably null
IGL02471:Rb1cc1 APN 1 6,310,275 (GRCm39) missense probably benign 0.01
IGL02677:Rb1cc1 APN 1 6,319,643 (GRCm39) missense probably benign
IGL02702:Rb1cc1 APN 1 6,310,247 (GRCm39) missense probably damaging 0.99
IGL02816:Rb1cc1 APN 1 6,333,052 (GRCm39) splice site probably benign
IGL02899:Rb1cc1 APN 1 6,334,807 (GRCm39) missense probably damaging 1.00
fingerling UTSW 1 6,331,256 (GRCm39) missense probably damaging 1.00
tots UTSW 1 6,315,861 (GRCm39) missense probably damaging 0.99
IGL02988:Rb1cc1 UTSW 1 6,318,035 (GRCm39) critical splice donor site probably null
R0020:Rb1cc1 UTSW 1 6,334,772 (GRCm39) missense possibly damaging 0.86
R0254:Rb1cc1 UTSW 1 6,333,071 (GRCm39) missense probably damaging 1.00
R0390:Rb1cc1 UTSW 1 6,318,858 (GRCm39) missense probably damaging 1.00
R0466:Rb1cc1 UTSW 1 6,333,491 (GRCm39) splice site probably null
R0482:Rb1cc1 UTSW 1 6,310,547 (GRCm39) missense probably damaging 1.00
R0510:Rb1cc1 UTSW 1 6,319,395 (GRCm39) missense probably benign 0.00
R0512:Rb1cc1 UTSW 1 6,318,767 (GRCm39) missense probably damaging 1.00
R0616:Rb1cc1 UTSW 1 6,314,486 (GRCm39) missense possibly damaging 0.80
R0617:Rb1cc1 UTSW 1 6,319,014 (GRCm39) missense possibly damaging 0.83
R0837:Rb1cc1 UTSW 1 6,304,495 (GRCm39) splice site probably null
R1399:Rb1cc1 UTSW 1 6,320,042 (GRCm39) missense probably benign 0.00
R1532:Rb1cc1 UTSW 1 6,319,958 (GRCm39) missense probably benign 0.00
R1542:Rb1cc1 UTSW 1 6,314,473 (GRCm39) missense possibly damaging 0.82
R1746:Rb1cc1 UTSW 1 6,333,237 (GRCm39) splice site probably null
R1764:Rb1cc1 UTSW 1 6,284,904 (GRCm39) intron probably benign
R1968:Rb1cc1 UTSW 1 6,318,419 (GRCm39) splice site probably null
R2025:Rb1cc1 UTSW 1 6,315,533 (GRCm39) missense probably damaging 1.00
R2076:Rb1cc1 UTSW 1 6,320,262 (GRCm39) missense possibly damaging 0.82
R2101:Rb1cc1 UTSW 1 6,319,559 (GRCm39) missense probably benign
R2249:Rb1cc1 UTSW 1 6,342,948 (GRCm39) missense probably damaging 1.00
R3176:Rb1cc1 UTSW 1 6,319,590 (GRCm39) missense probably benign
R3276:Rb1cc1 UTSW 1 6,319,590 (GRCm39) missense probably benign
R3716:Rb1cc1 UTSW 1 6,340,914 (GRCm39) critical splice acceptor site probably null
R3747:Rb1cc1 UTSW 1 6,318,966 (GRCm39) missense possibly damaging 0.92
R3850:Rb1cc1 UTSW 1 6,320,337 (GRCm39) missense probably benign 0.22
R3967:Rb1cc1 UTSW 1 6,318,494 (GRCm39) splice site probably benign
R3969:Rb1cc1 UTSW 1 6,318,494 (GRCm39) splice site probably benign
R3972:Rb1cc1 UTSW 1 6,319,224 (GRCm39) missense probably benign 0.00
R4166:Rb1cc1 UTSW 1 6,335,887 (GRCm39) intron probably benign
R4168:Rb1cc1 UTSW 1 6,300,248 (GRCm39) missense probably damaging 1.00
R4358:Rb1cc1 UTSW 1 6,315,861 (GRCm39) missense probably damaging 0.99
R4370:Rb1cc1 UTSW 1 6,318,771 (GRCm39) missense probably damaging 1.00
R4869:Rb1cc1 UTSW 1 6,285,245 (GRCm39) intron probably benign
R4945:Rb1cc1 UTSW 1 6,319,851 (GRCm39) missense probably benign 0.24
R5111:Rb1cc1 UTSW 1 6,284,858 (GRCm39) intron probably benign
R5175:Rb1cc1 UTSW 1 6,318,545 (GRCm39) missense probably benign
R5196:Rb1cc1 UTSW 1 6,304,454 (GRCm39) missense probably damaging 0.99
R5271:Rb1cc1 UTSW 1 6,319,417 (GRCm39) nonsense probably null
R5341:Rb1cc1 UTSW 1 6,285,266 (GRCm39) intron probably benign
R5952:Rb1cc1 UTSW 1 6,318,406 (GRCm39) missense probably benign
R5992:Rb1cc1 UTSW 1 6,304,220 (GRCm39) missense probably damaging 1.00
R6054:Rb1cc1 UTSW 1 6,320,058 (GRCm39) missense probably benign 0.01
R6064:Rb1cc1 UTSW 1 6,319,958 (GRCm39) missense probably benign 0.00
R6313:Rb1cc1 UTSW 1 6,314,357 (GRCm39) missense probably benign 0.00
R6345:Rb1cc1 UTSW 1 6,333,481 (GRCm39) missense probably benign 0.00
R6488:Rb1cc1 UTSW 1 6,340,951 (GRCm39) missense probably damaging 0.97
R6566:Rb1cc1 UTSW 1 6,319,316 (GRCm39) missense probably benign 0.15
R6739:Rb1cc1 UTSW 1 6,304,454 (GRCm39) missense probably damaging 0.99
R6829:Rb1cc1 UTSW 1 6,319,488 (GRCm39) missense probably benign 0.04
R6945:Rb1cc1 UTSW 1 6,331,256 (GRCm39) missense probably damaging 1.00
R6976:Rb1cc1 UTSW 1 6,333,126 (GRCm39) missense probably benign 0.01
R7031:Rb1cc1 UTSW 1 6,308,690 (GRCm39) critical splice donor site probably null
R7066:Rb1cc1 UTSW 1 6,320,229 (GRCm39) missense possibly damaging 0.69
R7185:Rb1cc1 UTSW 1 6,308,607 (GRCm39) missense probably damaging 1.00
R7276:Rb1cc1 UTSW 1 6,319,416 (GRCm39) missense probably benign 0.13
R7448:Rb1cc1 UTSW 1 6,315,727 (GRCm39) missense probably damaging 1.00
R7463:Rb1cc1 UTSW 1 6,319,404 (GRCm39) missense probably benign
R7484:Rb1cc1 UTSW 1 6,344,441 (GRCm39) missense probably damaging 1.00
R7496:Rb1cc1 UTSW 1 6,318,415 (GRCm39) missense probably null 0.02
R7618:Rb1cc1 UTSW 1 6,335,782 (GRCm39) splice site probably null
R7681:Rb1cc1 UTSW 1 6,310,547 (GRCm39) missense probably damaging 1.00
R7774:Rb1cc1 UTSW 1 6,318,309 (GRCm39) missense possibly damaging 0.63
R7780:Rb1cc1 UTSW 1 6,319,138 (GRCm39) nonsense probably null
R7947:Rb1cc1 UTSW 1 6,318,786 (GRCm39) missense probably damaging 1.00
R8057:Rb1cc1 UTSW 1 6,315,443 (GRCm39) missense probably damaging 1.00
R8094:Rb1cc1 UTSW 1 6,333,448 (GRCm39) nonsense probably null
R8527:Rb1cc1 UTSW 1 6,315,099 (GRCm39) missense probably damaging 1.00
R8758:Rb1cc1 UTSW 1 6,310,451 (GRCm39) missense probably benign 0.10
R8843:Rb1cc1 UTSW 1 6,315,395 (GRCm39) missense probably damaging 1.00
R8922:Rb1cc1 UTSW 1 6,319,194 (GRCm39) missense probably benign
R8937:Rb1cc1 UTSW 1 6,333,441 (GRCm39) missense probably benign
R9018:Rb1cc1 UTSW 1 6,319,490 (GRCm39) missense probably benign
R9106:Rb1cc1 UTSW 1 6,319,109 (GRCm39) missense
R9127:Rb1cc1 UTSW 1 6,333,073 (GRCm39) missense probably damaging 1.00
R9311:Rb1cc1 UTSW 1 6,310,539 (GRCm39) missense probably damaging 1.00
R9365:Rb1cc1 UTSW 1 6,315,117 (GRCm39) missense probably damaging 1.00
R9563:Rb1cc1 UTSW 1 6,314,339 (GRCm39) missense probably benign
R9598:Rb1cc1 UTSW 1 6,310,189 (GRCm39) missense probably damaging 1.00
R9608:Rb1cc1 UTSW 1 6,318,528 (GRCm39) missense probably benign 0.02
R9659:Rb1cc1 UTSW 1 6,318,673 (GRCm39) missense probably benign 0.33
R9799:Rb1cc1 UTSW 1 6,315,126 (GRCm39) missense probably damaging 1.00
Z1088:Rb1cc1 UTSW 1 6,319,242 (GRCm39) frame shift probably null
Predicted Primers PCR Primer
(F):5'- CACCCGCCTTTAATGGGAGATAG -3'
(R):5'- ATCAAGGCTCTATAAAGTCTAACCC -3'

Sequencing Primer
(F):5'- GTCATTTTCCTTCCCAAAGG -3'
(R):5'- GGCTCTATAAAGTCTAACCCTAGAG -3'
Posted On 2022-01-20