Incidental Mutation 'PIT4354001:Vmn1r68'
ID |
554819 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r68
|
Ensembl Gene |
ENSMUSG00000047031 |
Gene Name |
vomeronasal 1 receptor 68 |
Synonyms |
Gm6898 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.055)
|
Stock # |
PIT4354001 (G1)
|
Quality Score |
170.009 |
Status
|
Not validated
|
Chromosome |
7 |
Chromosomal Location |
10261137-10262096 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 10261958 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Asparagine to Tyrosine
at position 47
(N47Y)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000050927
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000058362]
|
AlphaFold |
E9Q0V3 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000058362
AA Change: N47Y
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000050927 Gene: ENSMUSG00000047031 AA Change: N47Y
Domain | Start | End | E-Value | Type |
Pfam:V1R
|
49 |
306 |
2e-33 |
PFAM |
|
Coding Region Coverage |
- 1x: 92.5%
- 3x: 90.1%
- 10x: 83.2%
- 20x: 69.0%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 38 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Arap2 |
A |
T |
5: 62,811,392 (GRCm39) |
Y1140N |
probably damaging |
Het |
Ccdc83 |
A |
T |
7: 89,873,182 (GRCm39) |
M391K |
probably benign |
Het |
Cntnap1 |
A |
T |
11: 101,072,123 (GRCm39) |
I459F |
probably damaging |
Het |
Cr2 |
T |
A |
1: 194,848,617 (GRCm39) |
Y302F |
probably damaging |
Het |
Ctu2 |
A |
T |
8: 123,205,714 (GRCm39) |
D179V |
probably damaging |
Het |
Cubn |
G |
A |
2: 13,473,663 (GRCm39) |
Q427* |
probably null |
Het |
Depdc7 |
A |
G |
2: 104,558,533 (GRCm39) |
S163P |
probably benign |
Het |
Eif2s3y |
C |
T |
Y: 1,020,126 (GRCm39) |
R385C |
probably benign |
Het |
Gigyf1 |
A |
G |
5: 137,522,366 (GRCm39) |
K728R |
unknown |
Het |
Gm1587 |
G |
A |
14: 78,034,473 (GRCm39) |
R32* |
probably null |
Het |
Hjv |
T |
C |
3: 96,435,761 (GRCm39) |
C340R |
probably damaging |
Het |
Isy1 |
A |
G |
6: 87,810,653 (GRCm39) |
I53T |
possibly damaging |
Het |
Myh8 |
A |
T |
11: 67,180,456 (GRCm39) |
N564I |
probably benign |
Het |
Neb |
A |
T |
2: 52,135,330 (GRCm39) |
I3260N |
probably damaging |
Het |
Npc1 |
C |
T |
18: 12,344,592 (GRCm39) |
G426E |
probably benign |
Het |
Nrdc |
G |
A |
4: 108,911,222 (GRCm39) |
|
probably null |
Het |
Or2v1 |
G |
A |
11: 49,025,132 (GRCm39) |
V38M |
probably damaging |
Het |
Or4c10b |
T |
A |
2: 89,711,852 (GRCm39) |
S227R |
probably benign |
Het |
Or4c116 |
C |
A |
2: 88,942,830 (GRCm39) |
E9* |
probably null |
Het |
Pate8 |
T |
A |
9: 36,492,597 (GRCm39) |
S103C |
possibly damaging |
Het |
Prss51 |
T |
A |
14: 64,334,546 (GRCm39) |
V91D |
probably damaging |
Het |
Qpct |
A |
C |
17: 79,389,188 (GRCm39) |
Y280S |
probably benign |
Het |
Rbpms |
A |
G |
8: 34,296,866 (GRCm39) |
V137A |
possibly damaging |
Het |
Rgl2 |
T |
A |
17: 34,152,914 (GRCm39) |
M441K |
possibly damaging |
Het |
Sdhaf3 |
A |
T |
6: 6,956,072 (GRCm39) |
I16F |
possibly damaging |
Het |
Slc38a3 |
T |
G |
9: 107,534,848 (GRCm39) |
N176H |
probably benign |
Het |
Sos1 |
T |
C |
17: 80,756,785 (GRCm39) |
S256G |
possibly damaging |
Het |
Spg11 |
A |
T |
2: 121,918,666 (GRCm39) |
C988S |
probably damaging |
Het |
Sync |
A |
T |
4: 129,200,447 (GRCm39) |
Q451L |
possibly damaging |
Het |
Tbc1d31 |
A |
G |
15: 57,831,329 (GRCm39) |
Y929C |
probably benign |
Het |
Thbs2 |
G |
A |
17: 14,910,230 (GRCm39) |
T123I |
probably damaging |
Het |
Thsd7a |
A |
C |
6: 12,331,926 (GRCm39) |
|
probably null |
Het |
Tnfrsf11a |
T |
C |
1: 105,749,242 (GRCm39) |
L220P |
probably damaging |
Het |
Trbv13-2 |
G |
A |
6: 41,098,752 (GRCm39) |
C109Y |
probably damaging |
Het |
Ugt3a1 |
G |
A |
15: 9,306,446 (GRCm39) |
W198* |
probably null |
Het |
Usp14 |
G |
A |
18: 9,996,189 (GRCm39) |
R464W |
probably damaging |
Het |
Vmn1r2 |
C |
T |
4: 3,172,162 (GRCm39) |
S27L |
probably benign |
Het |
Zfc3h1 |
T |
A |
10: 115,262,944 (GRCm39) |
Y1719* |
probably null |
Het |
|
Other mutations in Vmn1r68 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01892:Vmn1r68
|
APN |
7 |
10,261,334 (GRCm39) |
missense |
possibly damaging |
0.76 |
IGL02051:Vmn1r68
|
APN |
7 |
10,261,948 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02112:Vmn1r68
|
APN |
7 |
10,261,787 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02619:Vmn1r68
|
APN |
7 |
10,261,603 (GRCm39) |
missense |
probably benign |
0.14 |
IGL03033:Vmn1r68
|
APN |
7 |
10,262,074 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03184:Vmn1r68
|
APN |
7 |
10,261,799 (GRCm39) |
missense |
probably benign |
0.16 |
R0141:Vmn1r68
|
UTSW |
7 |
10,261,252 (GRCm39) |
missense |
possibly damaging |
0.69 |
R0359:Vmn1r68
|
UTSW |
7 |
10,261,201 (GRCm39) |
missense |
probably damaging |
1.00 |
R0634:Vmn1r68
|
UTSW |
7 |
10,261,162 (GRCm39) |
missense |
probably benign |
0.00 |
R1731:Vmn1r68
|
UTSW |
7 |
10,261,802 (GRCm39) |
missense |
probably damaging |
1.00 |
R2021:Vmn1r68
|
UTSW |
7 |
10,261,918 (GRCm39) |
missense |
probably damaging |
1.00 |
R2022:Vmn1r68
|
UTSW |
7 |
10,261,918 (GRCm39) |
missense |
probably damaging |
1.00 |
R2243:Vmn1r68
|
UTSW |
7 |
10,262,089 (GRCm39) |
missense |
probably damaging |
0.98 |
R2262:Vmn1r68
|
UTSW |
7 |
10,261,372 (GRCm39) |
missense |
probably damaging |
1.00 |
R3877:Vmn1r68
|
UTSW |
7 |
10,261,408 (GRCm39) |
missense |
probably damaging |
1.00 |
R4470:Vmn1r68
|
UTSW |
7 |
10,261,275 (GRCm39) |
missense |
probably benign |
0.23 |
R4843:Vmn1r68
|
UTSW |
7 |
10,261,904 (GRCm39) |
missense |
probably benign |
0.00 |
R5198:Vmn1r68
|
UTSW |
7 |
10,261,723 (GRCm39) |
missense |
probably benign |
0.00 |
R5835:Vmn1r68
|
UTSW |
7 |
10,261,747 (GRCm39) |
missense |
possibly damaging |
0.68 |
R5906:Vmn1r68
|
UTSW |
7 |
10,261,550 (GRCm39) |
missense |
probably benign |
0.02 |
R6015:Vmn1r68
|
UTSW |
7 |
10,261,616 (GRCm39) |
missense |
probably benign |
0.31 |
R7073:Vmn1r68
|
UTSW |
7 |
10,261,778 (GRCm39) |
missense |
probably benign |
0.00 |
R7614:Vmn1r68
|
UTSW |
7 |
10,261,553 (GRCm39) |
missense |
probably benign |
0.05 |
R7699:Vmn1r68
|
UTSW |
7 |
10,261,559 (GRCm39) |
missense |
probably benign |
0.15 |
R7700:Vmn1r68
|
UTSW |
7 |
10,261,559 (GRCm39) |
missense |
probably benign |
0.15 |
R7912:Vmn1r68
|
UTSW |
7 |
10,261,237 (GRCm39) |
missense |
probably benign |
0.01 |
R8166:Vmn1r68
|
UTSW |
7 |
10,261,888 (GRCm39) |
missense |
probably benign |
0.10 |
R8426:Vmn1r68
|
UTSW |
7 |
10,261,382 (GRCm39) |
missense |
probably benign |
0.02 |
R9466:Vmn1r68
|
UTSW |
7 |
10,261,417 (GRCm39) |
missense |
probably damaging |
1.00 |
R9466:Vmn1r68
|
UTSW |
7 |
10,261,317 (GRCm39) |
nonsense |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- GATGTACTTCGGCCAACTCTTTG -3'
(R):5'- CCACTGTGATCCCATCTGATTTAG -3'
Sequencing Primer
(F):5'- CGGCCAACTCTTTGAATGTAC -3'
(R):5'- TAGCCAATGAGAAGCTCTTCAG -3'
|
Posted On |
2019-06-07 |