Incidental Mutation 'R9297:Ccdc162'
ID |
704675 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Ccdc162
|
Ensembl Gene |
ENSMUSG00000075225 |
Gene Name |
coiled-coil domain containing 162 |
Synonyms |
Gm29096, Gm6976, 5033413D22Rik |
MMRRC Submission |
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.070)
|
Stock # |
R9297 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
10 |
Chromosomal Location |
41414838-41592586 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to A
at 41506110 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Methionine to Isoleucine
at position 893
(M893I)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000140774
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000019955]
[ENSMUST00000099932]
[ENSMUST00000189488]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably benign
Transcript: ENSMUST00000019955
|
SMART Domains |
Protein: ENSMUSP00000019955 Gene: ENSMUSG00000075225
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
37 |
N/A |
INTRINSIC |
low complexity region
|
116 |
138 |
N/A |
INTRINSIC |
coiled coil region
|
177 |
217 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000099932
|
SMART Domains |
Protein: ENSMUSP00000097516 Gene: ENSMUSG00000075225
Domain | Start | End | E-Value | Type |
coiled coil region
|
327 |
366 |
N/A |
INTRINSIC |
low complexity region
|
490 |
512 |
N/A |
INTRINSIC |
coiled coil region
|
551 |
607 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000189488
AA Change: M893I
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000140774 Gene: ENSMUSG00000075225 AA Change: M893I
Domain | Start | End | E-Value | Type |
low complexity region
|
328 |
347 |
N/A |
INTRINSIC |
|
Meta Mutation Damage Score |
0.0846 |
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.7%
- 20x: 98.9%
|
Validation Efficiency |
99% (73/74) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 73 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adamts1 |
T |
C |
16: 85,599,534 (GRCm39) |
Q22R |
probably benign |
Het |
Adamts20 |
A |
G |
15: 94,301,321 (GRCm39) |
S68P |
possibly damaging |
Het |
Adcy6 |
A |
T |
15: 98,491,466 (GRCm39) |
N1044K |
possibly damaging |
Het |
Ak9 |
T |
G |
10: 41,299,081 (GRCm39) |
M1594R |
unknown |
Het |
Alkbh3 |
A |
G |
2: 93,835,082 (GRCm39) |
S88P |
probably damaging |
Het |
Angpt1 |
A |
G |
15: 42,301,751 (GRCm39) |
I419T |
probably benign |
Het |
Ankrd31 |
A |
T |
13: 97,015,085 (GRCm39) |
L1451F |
probably benign |
Het |
Ap1b1 |
T |
C |
11: 4,990,157 (GRCm39) |
I860T |
probably benign |
Het |
Apcdd1 |
C |
T |
18: 63,055,731 (GRCm39) |
|
probably benign |
Het |
Astn2 |
T |
C |
4: 65,460,960 (GRCm39) |
D1058G |
possibly damaging |
Het |
Atg3 |
A |
G |
16: 44,987,371 (GRCm39) |
H48R |
possibly damaging |
Het |
Bnc2 |
A |
C |
4: 84,474,136 (GRCm39) |
|
probably benign |
Het |
Cadps2 |
A |
G |
6: 23,496,887 (GRCm39) |
Y453H |
probably benign |
Het |
Catsperg1 |
T |
C |
7: 28,891,085 (GRCm39) |
T653A |
probably benign |
Het |
Ccdc102a |
A |
G |
8: 95,638,120 (GRCm39) |
S249P |
possibly damaging |
Het |
Ccdc125 |
A |
G |
13: 100,832,920 (GRCm39) |
Y499C |
probably damaging |
Het |
Ccdc141 |
A |
G |
2: 76,842,028 (GRCm39) |
F1468L |
probably benign |
Het |
Ccdc33 |
C |
A |
9: 57,993,876 (GRCm39) |
W335L |
possibly damaging |
Het |
Chn2 |
T |
A |
6: 54,272,840 (GRCm39) |
Y355N |
probably damaging |
Het |
Clec4g |
A |
G |
8: 3,766,500 (GRCm39) |
M267T |
probably damaging |
Het |
Cpa6 |
A |
T |
1: 10,554,273 (GRCm39) |
D111E |
possibly damaging |
Het |
Crlf3 |
A |
G |
11: 79,950,031 (GRCm39) |
C200R |
probably damaging |
Het |
Cyp4a10 |
T |
C |
4: 115,378,375 (GRCm39) |
S164P |
probably damaging |
Het |
Def6 |
A |
G |
17: 28,436,714 (GRCm39) |
N126S |
probably damaging |
Het |
Diaph1 |
G |
A |
18: 38,022,828 (GRCm39) |
T782I |
probably benign |
Het |
Dnah5 |
A |
C |
15: 28,204,054 (GRCm39) |
|
probably benign |
Het |
Eme1 |
A |
T |
11: 94,541,614 (GRCm39) |
S69R |
probably benign |
Het |
Fat3 |
A |
T |
9: 15,908,996 (GRCm39) |
D2335E |
probably damaging |
Het |
Fstl4 |
A |
G |
11: 53,024,973 (GRCm39) |
K282E |
possibly damaging |
Het |
Galnt7 |
T |
C |
8: 57,995,555 (GRCm39) |
E380G |
probably damaging |
Het |
Gm973 |
A |
T |
1: 59,583,829 (GRCm39) |
Y204F |
probably damaging |
Het |
Hace1 |
T |
A |
10: 45,528,769 (GRCm39) |
S337T |
probably benign |
Het |
Ipo8 |
C |
A |
6: 148,703,076 (GRCm39) |
C416F |
possibly damaging |
Het |
Kcnt2 |
T |
C |
1: 140,352,933 (GRCm39) |
I214T |
probably damaging |
Het |
Kdelr3 |
C |
A |
15: 79,411,275 (GRCm39) |
L203I |
probably benign |
Het |
Kif26b |
C |
T |
1: 178,543,374 (GRCm39) |
Q336* |
probably null |
Het |
Krt36 |
A |
G |
11: 99,994,271 (GRCm39) |
Y269H |
probably damaging |
Het |
Lamc1 |
G |
T |
1: 153,127,746 (GRCm39) |
R386S |
probably damaging |
Het |
Lipc |
T |
A |
9: 70,727,736 (GRCm39) |
D122V |
probably damaging |
Het |
Lrba |
A |
G |
3: 86,280,873 (GRCm39) |
T1841A |
probably damaging |
Het |
Lrit1 |
T |
A |
14: 36,783,993 (GRCm39) |
D440E |
probably damaging |
Het |
Map4 |
T |
C |
9: 109,882,480 (GRCm39) |
I448T |
probably benign |
Het |
Megf8 |
G |
T |
7: 25,030,511 (GRCm39) |
C488F |
probably damaging |
Het |
Mllt6 |
A |
G |
11: 97,563,314 (GRCm39) |
E299G |
probably damaging |
Het |
Mpst |
G |
T |
15: 78,294,642 (GRCm39) |
V125L |
probably damaging |
Het |
Msx1 |
G |
A |
5: 37,981,756 (GRCm39) |
|
probably benign |
Het |
Muc2 |
A |
G |
7: 141,302,759 (GRCm39) |
E473G |
|
Het |
Myo15a |
A |
G |
11: 60,385,899 (GRCm39) |
R602G |
probably null |
Het |
Myod1 |
A |
T |
7: 46,026,356 (GRCm39) |
H87L |
probably damaging |
Het |
Nid1 |
T |
C |
13: 13,650,897 (GRCm39) |
V478A |
possibly damaging |
Het |
Obscn |
A |
T |
11: 58,898,359 (GRCm39) |
I6634N |
unknown |
Het |
Or52ab7 |
T |
A |
7: 102,978,583 (GRCm39) |
Y297N |
probably damaging |
Het |
Or52e7 |
T |
C |
7: 104,684,830 (GRCm39) |
Y142H |
probably damaging |
Het |
Or8k22 |
A |
G |
2: 86,163,188 (GRCm39) |
Y171H |
probably benign |
Het |
Pdgfrl |
C |
T |
8: 41,391,268 (GRCm39) |
S66F |
probably damaging |
Het |
Phf20 |
G |
A |
2: 156,115,690 (GRCm39) |
R337H |
probably benign |
Het |
Pkhd1 |
T |
A |
1: 20,293,118 (GRCm39) |
Y2834F |
probably benign |
Het |
Plekhg4 |
A |
C |
8: 106,105,907 (GRCm39) |
E768A |
probably damaging |
Het |
Prss37 |
A |
T |
6: 40,491,909 (GRCm39) |
Y224N |
probably damaging |
Het |
Ptprs |
A |
T |
17: 56,765,257 (GRCm39) |
V9E |
probably damaging |
Het |
Ptprt |
A |
G |
2: 161,417,698 (GRCm39) |
L926S |
probably benign |
Het |
Rgl1 |
G |
A |
1: 152,400,454 (GRCm39) |
T649I |
possibly damaging |
Het |
Serpinf1 |
A |
G |
11: 75,307,251 (GRCm39) |
S29P |
probably damaging |
Het |
Skint6 |
A |
T |
4: 112,668,717 (GRCm39) |
D1119E |
probably benign |
Het |
Snw1 |
T |
C |
12: 87,505,674 (GRCm39) |
K255E |
probably damaging |
Het |
Sox6 |
T |
C |
7: 115,261,557 (GRCm39) |
I220V |
probably benign |
Het |
Stimate |
T |
A |
14: 30,588,639 (GRCm39) |
V122E |
probably damaging |
Het |
Tas2r114 |
A |
G |
6: 131,666,287 (GRCm39) |
I247T |
probably damaging |
Het |
Tmem145 |
C |
T |
7: 25,008,257 (GRCm39) |
T280M |
probably damaging |
Het |
Usp48 |
G |
A |
4: 137,340,996 (GRCm39) |
G332E |
probably benign |
Het |
Zfp219 |
T |
C |
14: 52,246,494 (GRCm39) |
H211R |
probably damaging |
Het |
Zfp42 |
T |
C |
8: 43,748,772 (GRCm39) |
N243S |
possibly damaging |
Het |
Zkscan4 |
T |
A |
13: 21,668,201 (GRCm39) |
S246R |
probably benign |
Het |
|
Other mutations in Ccdc162 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01013:Ccdc162
|
APN |
10 |
41,457,335 (GRCm39) |
missense |
probably benign |
0.01 |
IGL01366:Ccdc162
|
APN |
10 |
41,456,302 (GRCm39) |
missense |
possibly damaging |
0.49 |
IGL01924:Ccdc162
|
APN |
10 |
41,445,883 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02504:Ccdc162
|
APN |
10 |
41,428,384 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02678:Ccdc162
|
APN |
10 |
41,437,151 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02955:Ccdc162
|
APN |
10 |
41,437,123 (GRCm39) |
missense |
probably damaging |
1.00 |
beeswax
|
UTSW |
10 |
41,437,222 (GRCm39) |
missense |
possibly damaging |
0.57 |
honeycomb
|
UTSW |
10 |
41,520,637 (GRCm39) |
missense |
probably benign |
0.35 |
FR4304:Ccdc162
|
UTSW |
10 |
41,432,117 (GRCm39) |
missense |
possibly damaging |
0.49 |
R0432:Ccdc162
|
UTSW |
10 |
41,417,856 (GRCm39) |
missense |
probably benign |
0.01 |
R0585:Ccdc162
|
UTSW |
10 |
41,462,375 (GRCm39) |
missense |
probably benign |
0.03 |
R0645:Ccdc162
|
UTSW |
10 |
41,462,407 (GRCm39) |
splice site |
probably benign |
|
R0731:Ccdc162
|
UTSW |
10 |
41,455,139 (GRCm39) |
missense |
probably damaging |
1.00 |
R1426:Ccdc162
|
UTSW |
10 |
41,429,178 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1447:Ccdc162
|
UTSW |
10 |
41,456,243 (GRCm39) |
missense |
probably damaging |
1.00 |
R1712:Ccdc162
|
UTSW |
10 |
41,415,427 (GRCm39) |
missense |
probably benign |
0.35 |
R2138:Ccdc162
|
UTSW |
10 |
41,457,293 (GRCm39) |
missense |
probably benign |
0.15 |
R2351:Ccdc162
|
UTSW |
10 |
41,431,968 (GRCm39) |
critical splice donor site |
probably null |
|
R2394:Ccdc162
|
UTSW |
10 |
41,445,894 (GRCm39) |
missense |
probably damaging |
1.00 |
R2431:Ccdc162
|
UTSW |
10 |
41,445,841 (GRCm39) |
missense |
probably benign |
|
R2571:Ccdc162
|
UTSW |
10 |
41,428,393 (GRCm39) |
missense |
probably damaging |
1.00 |
R2873:Ccdc162
|
UTSW |
10 |
41,531,095 (GRCm39) |
missense |
possibly damaging |
0.68 |
R2926:Ccdc162
|
UTSW |
10 |
41,437,203 (GRCm39) |
start gained |
probably benign |
|
R2999:Ccdc162
|
UTSW |
10 |
41,456,286 (GRCm39) |
missense |
probably benign |
0.00 |
R3412:Ccdc162
|
UTSW |
10 |
41,415,545 (GRCm39) |
splice site |
probably benign |
|
R3712:Ccdc162
|
UTSW |
10 |
41,463,375 (GRCm39) |
missense |
probably benign |
|
R3736:Ccdc162
|
UTSW |
10 |
41,465,564 (GRCm39) |
splice site |
probably null |
|
R4112:Ccdc162
|
UTSW |
10 |
41,532,324 (GRCm39) |
missense |
possibly damaging |
0.77 |
R4557:Ccdc162
|
UTSW |
10 |
41,463,384 (GRCm39) |
missense |
probably benign |
0.01 |
R4580:Ccdc162
|
UTSW |
10 |
41,437,136 (GRCm39) |
missense |
probably benign |
0.02 |
R4685:Ccdc162
|
UTSW |
10 |
41,557,682 (GRCm39) |
missense |
possibly damaging |
0.89 |
R4837:Ccdc162
|
UTSW |
10 |
41,549,863 (GRCm39) |
missense |
probably benign |
0.00 |
R5155:Ccdc162
|
UTSW |
10 |
41,455,147 (GRCm39) |
missense |
probably damaging |
1.00 |
R5155:Ccdc162
|
UTSW |
10 |
41,429,576 (GRCm39) |
splice site |
probably null |
|
R5645:Ccdc162
|
UTSW |
10 |
41,428,352 (GRCm39) |
missense |
probably benign |
0.06 |
R5656:Ccdc162
|
UTSW |
10 |
41,445,930 (GRCm39) |
missense |
probably benign |
0.26 |
R5682:Ccdc162
|
UTSW |
10 |
41,432,799 (GRCm39) |
nonsense |
probably null |
|
R5808:Ccdc162
|
UTSW |
10 |
41,531,500 (GRCm39) |
missense |
possibly damaging |
0.62 |
R5909:Ccdc162
|
UTSW |
10 |
41,437,111 (GRCm39) |
missense |
probably damaging |
1.00 |
R6000:Ccdc162
|
UTSW |
10 |
41,437,159 (GRCm39) |
missense |
possibly damaging |
0.75 |
R6057:Ccdc162
|
UTSW |
10 |
41,510,037 (GRCm39) |
missense |
possibly damaging |
0.72 |
R6211:Ccdc162
|
UTSW |
10 |
41,506,141 (GRCm39) |
nonsense |
probably null |
|
R6264:Ccdc162
|
UTSW |
10 |
41,570,464 (GRCm39) |
missense |
probably benign |
0.31 |
R6329:Ccdc162
|
UTSW |
10 |
41,539,147 (GRCm39) |
missense |
possibly damaging |
0.76 |
R6349:Ccdc162
|
UTSW |
10 |
41,570,396 (GRCm39) |
missense |
probably damaging |
0.97 |
R6398:Ccdc162
|
UTSW |
10 |
41,503,145 (GRCm39) |
missense |
probably damaging |
1.00 |
R6453:Ccdc162
|
UTSW |
10 |
41,426,821 (GRCm39) |
missense |
probably damaging |
1.00 |
R6602:Ccdc162
|
UTSW |
10 |
41,491,976 (GRCm39) |
missense |
probably benign |
0.00 |
R6627:Ccdc162
|
UTSW |
10 |
41,539,181 (GRCm39) |
missense |
probably damaging |
1.00 |
R6722:Ccdc162
|
UTSW |
10 |
41,520,637 (GRCm39) |
missense |
probably benign |
0.35 |
R6750:Ccdc162
|
UTSW |
10 |
41,437,222 (GRCm39) |
missense |
possibly damaging |
0.57 |
R6968:Ccdc162
|
UTSW |
10 |
41,549,840 (GRCm39) |
missense |
possibly damaging |
0.55 |
R6970:Ccdc162
|
UTSW |
10 |
41,491,954 (GRCm39) |
missense |
probably benign |
0.03 |
R6989:Ccdc162
|
UTSW |
10 |
41,457,349 (GRCm39) |
missense |
probably damaging |
0.99 |
R7008:Ccdc162
|
UTSW |
10 |
41,428,411 (GRCm39) |
missense |
probably damaging |
1.00 |
R7135:Ccdc162
|
UTSW |
10 |
41,549,855 (GRCm39) |
missense |
probably benign |
0.00 |
R7139:Ccdc162
|
UTSW |
10 |
41,542,717 (GRCm39) |
missense |
possibly damaging |
0.49 |
R7224:Ccdc162
|
UTSW |
10 |
41,437,187 (GRCm39) |
missense |
probably damaging |
1.00 |
R7230:Ccdc162
|
UTSW |
10 |
41,554,809 (GRCm39) |
missense |
probably damaging |
1.00 |
R7256:Ccdc162
|
UTSW |
10 |
41,431,997 (GRCm39) |
missense |
probably damaging |
0.99 |
R7261:Ccdc162
|
UTSW |
10 |
41,437,136 (GRCm39) |
missense |
probably benign |
0.02 |
R7390:Ccdc162
|
UTSW |
10 |
41,510,044 (GRCm39) |
missense |
probably benign |
|
R7712:Ccdc162
|
UTSW |
10 |
41,503,223 (GRCm39) |
missense |
possibly damaging |
0.56 |
R7726:Ccdc162
|
UTSW |
10 |
41,429,071 (GRCm39) |
missense |
probably benign |
0.00 |
R7754:Ccdc162
|
UTSW |
10 |
41,463,371 (GRCm39) |
missense |
probably damaging |
1.00 |
R7764:Ccdc162
|
UTSW |
10 |
41,566,109 (GRCm39) |
missense |
possibly damaging |
0.95 |
R8053:Ccdc162
|
UTSW |
10 |
41,520,577 (GRCm39) |
missense |
probably benign |
|
R8088:Ccdc162
|
UTSW |
10 |
41,499,410 (GRCm39) |
missense |
possibly damaging |
0.68 |
R8094:Ccdc162
|
UTSW |
10 |
41,488,864 (GRCm39) |
missense |
probably benign |
0.02 |
R8097:Ccdc162
|
UTSW |
10 |
41,510,115 (GRCm39) |
missense |
probably benign |
0.03 |
R8321:Ccdc162
|
UTSW |
10 |
41,510,029 (GRCm39) |
missense |
probably damaging |
0.98 |
R8377:Ccdc162
|
UTSW |
10 |
41,457,306 (GRCm39) |
missense |
probably benign |
0.08 |
R8399:Ccdc162
|
UTSW |
10 |
41,415,517 (GRCm39) |
missense |
probably damaging |
1.00 |
R8669:Ccdc162
|
UTSW |
10 |
41,428,352 (GRCm39) |
missense |
probably benign |
0.06 |
R8772:Ccdc162
|
UTSW |
10 |
41,506,033 (GRCm39) |
missense |
probably damaging |
0.99 |
R8810:Ccdc162
|
UTSW |
10 |
41,542,737 (GRCm39) |
missense |
probably benign |
0.41 |
R8903:Ccdc162
|
UTSW |
10 |
41,531,440 (GRCm39) |
critical splice donor site |
probably null |
|
R8928:Ccdc162
|
UTSW |
10 |
41,462,245 (GRCm39) |
splice site |
probably benign |
|
R8950:Ccdc162
|
UTSW |
10 |
41,474,507 (GRCm39) |
missense |
probably benign |
0.00 |
R8960:Ccdc162
|
UTSW |
10 |
41,429,178 (GRCm39) |
missense |
probably damaging |
0.96 |
R8985:Ccdc162
|
UTSW |
10 |
41,432,102 (GRCm39) |
missense |
probably damaging |
1.00 |
R9071:Ccdc162
|
UTSW |
10 |
41,457,174 (GRCm39) |
nonsense |
probably null |
|
R9254:Ccdc162
|
UTSW |
10 |
41,488,944 (GRCm39) |
critical splice acceptor site |
probably null |
|
R9318:Ccdc162
|
UTSW |
10 |
41,506,110 (GRCm39) |
missense |
probably benign |
|
R9518:Ccdc162
|
UTSW |
10 |
41,465,572 (GRCm39) |
missense |
probably damaging |
1.00 |
R9525:Ccdc162
|
UTSW |
10 |
41,559,222 (GRCm39) |
missense |
probably damaging |
0.99 |
R9539:Ccdc162
|
UTSW |
10 |
41,463,407 (GRCm39) |
missense |
possibly damaging |
0.54 |
R9638:Ccdc162
|
UTSW |
10 |
41,437,159 (GRCm39) |
missense |
probably benign |
0.01 |
Z1176:Ccdc162
|
UTSW |
10 |
41,530,993 (GRCm39) |
missense |
possibly damaging |
0.84 |
Z1176:Ccdc162
|
UTSW |
10 |
41,481,104 (GRCm39) |
missense |
possibly damaging |
0.84 |
Z1176:Ccdc162
|
UTSW |
10 |
41,429,127 (GRCm39) |
missense |
probably benign |
0.00 |
Z1176:Ccdc162
|
UTSW |
10 |
41,566,088 (GRCm39) |
missense |
probably benign |
0.00 |
Z1177:Ccdc162
|
UTSW |
10 |
41,559,191 (GRCm39) |
missense |
probably benign |
0.00 |
|
Predicted Primers |
PCR Primer
(F):5'- ATGGATCTTCTGGTCCCCTGAC -3'
(R):5'- TATATTAGCCCTCATAACCCTCTGG -3'
Sequencing Primer
(F):5'- TGGTCCCCTGACTAACCCAG -3'
(R):5'- CCTCTGGGCAGTCCTATTAATTAGTG -3'
|
Posted On |
2022-03-25 |