Incidental Mutation 'R1653:Casd1'
| ID |
188848 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Casd1
|
| Ensembl Gene |
ENSMUSG00000015189 |
| Gene Name |
CAS1 domain containing 1 |
| Synonyms |
Cast1 |
| MMRRC Submission |
039689-MU
|
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.312)
|
| Stock # |
R1653 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
6 |
| Chromosomal Location |
4600839-4643355 bp(+) (GRCm38) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 4624134 bp (GRCm38)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Leucine to Proline
at position 309
(L309P)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000015333
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000015333]
[ENSMUST00000181734]
|
| AlphaFold |
Q7TN73 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000015333
AA Change: L309P
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| SMART Domains |
Protein: ENSMUSP00000015333
Gene: ENSMUSG00000015189
AA Change: L309P
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
22 |
39 |
N/A |
INTRINSIC |
|
Pfam:PC-Esterase
|
71 |
292 |
6.3e-33 |
PFAM |
|
Pfam:Cas1_AcylT
|
295 |
776 |
9.4e-220 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000141359
|
| SMART Domains |
Protein: ENSMUSP00000115427
Gene: ENSMUSG00000015189
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
30 |
N/A |
INTRINSIC |
|
Pfam:PC-Esterase
|
60 |
113 |
1.5e-13 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000181734
|
| SMART Domains |
Protein: ENSMUSP00000137822
Gene: ENSMUSG00000015189
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
22 |
39 |
N/A |
INTRINSIC |
|
Pfam:PC-Esterase
|
74 |
271 |
2.9e-18 |
PFAM |
|
Pfam:Cas1_AcylT
|
272 |
402 |
3.4e-45 |
PFAM |
|
Pfam:Cas1_AcylT
|
399 |
484 |
3.4e-37 |
PFAM |
|
Pfam:Cas1_AcylT
|
480 |
527 |
4.4e-11 |
PFAM |
|
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.4%
- 20x: 92.7%
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 51 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 9130019O22Rik |
G |
T |
7: 127,384,480 |
H483Q |
possibly damaging |
Het |
| Adam34 |
A |
T |
8: 43,650,645 |
C654* |
probably null |
Het |
| Adamts19 |
T |
A |
18: 58,890,293 |
N253K |
probably benign |
Het |
| Adgrb3 |
A |
G |
1: 25,101,503 |
L1162S |
probably benign |
Het |
| Ap2b1 |
T |
A |
11: 83,346,831 |
Y574N |
probably damaging |
Het |
| Atrn |
A |
G |
2: 130,935,624 |
I198V |
probably benign |
Het |
| Bcan |
T |
A |
3: 87,994,196 |
I400F |
probably damaging |
Het |
| Capn10 |
A |
G |
1: 92,946,898 |
Y617C |
probably damaging |
Het |
| Capn8 |
A |
G |
1: 182,623,951 |
N578D |
probably benign |
Het |
| Ccser1 |
T |
A |
6: 61,311,465 |
I204K |
probably benign |
Het |
| Cd276 |
T |
C |
9: 58,537,449 |
T80A |
probably benign |
Het |
| Cdh3 |
T |
C |
8: 106,539,068 |
S248P |
probably damaging |
Het |
| Celsr2 |
T |
C |
3: 108,413,520 |
T659A |
possibly damaging |
Het |
| Col6a4 |
C |
T |
9: 106,072,409 |
V676I |
probably damaging |
Het |
| Crmp1 |
T |
A |
5: 37,286,468 |
V575D |
probably damaging |
Het |
| Ep400 |
G |
A |
5: 110,693,174 |
Q1795* |
probably null |
Het |
| Gcnt3 |
A |
G |
9: 70,035,077 |
C70R |
probably damaging |
Het |
| Gm12258 |
T |
C |
11: 58,858,287 |
I96T |
possibly damaging |
Het |
| Gpr183 |
A |
G |
14: 121,954,263 |
F282S |
probably damaging |
Het |
| Igfals |
T |
C |
17: 24,881,078 |
V381A |
probably benign |
Het |
| Irs3 |
C |
A |
5: 137,644,521 |
L218F |
probably damaging |
Het |
| Kdm5b |
T |
C |
1: 134,602,481 |
F410S |
probably damaging |
Het |
| Klc4 |
T |
C |
17: 46,631,859 |
Y593C |
possibly damaging |
Het |
| Lce1h |
T |
A |
3: 92,763,443 |
Q134L |
unknown |
Het |
| Lyst |
T |
C |
13: 13,635,226 |
S494P |
probably damaging |
Het |
| March3 |
A |
G |
18: 56,811,895 |
M42T |
probably benign |
Het |
| Myh7 |
A |
G |
14: 54,990,789 |
I250T |
probably benign |
Het |
| N4bp1 |
G |
T |
8: 86,844,948 |
H807Q |
probably benign |
Het |
| Ndn |
C |
T |
7: 62,348,508 |
P34L |
probably benign |
Het |
| Nfs1 |
C |
T |
2: 156,125,336 |
G44D |
probably damaging |
Het |
| Nrg1 |
C |
T |
8: 31,818,653 |
R445H |
probably damaging |
Het |
| Olfr1507 |
A |
T |
14: 52,490,772 |
F64Y |
probably damaging |
Het |
| Olfr299 |
T |
C |
7: 86,466,212 |
V267A |
probably benign |
Het |
| Olfr683 |
T |
A |
7: 105,143,870 |
D141V |
possibly damaging |
Het |
| Pak7 |
C |
T |
2: 136,116,887 |
V94M |
probably damaging |
Het |
| Pdk1 |
G |
A |
2: 71,888,995 |
|
probably null |
Het |
| Sin3b |
G |
T |
8: 72,741,519 |
V290L |
probably benign |
Het |
| Sirt1 |
T |
C |
10: 63,321,809 |
T609A |
probably benign |
Het |
| Skint5 |
A |
T |
4: 113,490,678 |
S1289T |
unknown |
Het |
| Slc32a1 |
A |
T |
2: 158,614,889 |
H488L |
probably benign |
Het |
| Slc35b3 |
A |
G |
13: 38,955,798 |
S18P |
probably benign |
Het |
| Spaca7 |
T |
A |
8: 12,586,501 |
I109K |
possibly damaging |
Het |
| Tmem204 |
A |
G |
17: 25,080,527 |
L6P |
possibly damaging |
Het |
| Tubgcp6 |
G |
A |
15: 89,107,442 |
R651C |
probably damaging |
Het |
| Vps13b |
T |
A |
15: 35,607,272 |
L1117* |
probably null |
Het |
| Wdcp |
T |
C |
12: 4,851,815 |
L557P |
probably damaging |
Het |
| Wwp2 |
T |
C |
8: 107,483,410 |
F140S |
possibly damaging |
Het |
| Zfp429 |
C |
T |
13: 67,389,924 |
R467H |
possibly damaging |
Het |
| Zfp839 |
T |
A |
12: 110,855,250 |
M166K |
probably benign |
Het |
| Zfyve9 |
G |
A |
4: 108,660,577 |
Q1106* |
probably null |
Het |
| Zrsr1 |
T |
A |
11: 22,974,158 |
C311S |
probably damaging |
Het |
|
| Other mutations in Casd1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00704:Casd1
|
APN |
6 |
4,607,979 (GRCm38) |
splice site |
probably benign |
|
|
IGL00788:Casd1
|
APN |
6 |
4,624,400 (GRCm38) |
missense |
probably benign |
0.30 |
|
IGL01161:Casd1
|
APN |
6 |
4,619,833 (GRCm38) |
missense |
possibly damaging |
0.68 |
|
IGL01558:Casd1
|
APN |
6 |
4,624,143 (GRCm38) |
missense |
possibly damaging |
0.56 |
|
IGL02124:Casd1
|
APN |
6 |
4,624,142 (GRCm38) |
missense |
probably benign |
0.26 |
|
IGL02550:Casd1
|
APN |
6 |
4,642,009 (GRCm38) |
missense |
probably benign |
0.03 |
|
IGL02822:Casd1
|
APN |
6 |
4,630,017 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL02957:Casd1
|
APN |
6 |
4,634,068 (GRCm38) |
missense |
possibly damaging |
0.84 |
|
IGL03113:Casd1
|
APN |
6 |
4,640,951 (GRCm38) |
missense |
probably damaging |
0.99 |
|
IGL03138:Casd1
|
UTSW |
6 |
4,613,236 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R0653:Casd1
|
UTSW |
6 |
4,608,075 (GRCm38) |
missense |
probably benign |
0.00 |
|
R0673:Casd1
|
UTSW |
6 |
4,624,440 (GRCm38) |
missense |
possibly damaging |
0.68 |
|
R0729:Casd1
|
UTSW |
6 |
4,619,753 (GRCm38) |
splice site |
probably benign |
|
|
R0742:Casd1
|
UTSW |
6 |
4,635,888 (GRCm38) |
critical splice donor site |
probably null |
|
|
R0941:Casd1
|
UTSW |
6 |
4,635,848 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R1056:Casd1
|
UTSW |
6 |
4,641,967 (GRCm38) |
missense |
probably benign |
0.03 |
|
R1390:Casd1
|
UTSW |
6 |
4,641,859 (GRCm38) |
missense |
probably benign |
0.04 |
|
R1394:Casd1
|
UTSW |
6 |
4,624,117 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R1643:Casd1
|
UTSW |
6 |
4,621,243 (GRCm38) |
missense |
probably benign |
0.06 |
|
R1713:Casd1
|
UTSW |
6 |
4,624,104 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R1861:Casd1
|
UTSW |
6 |
4,640,951 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R1906:Casd1
|
UTSW |
6 |
4,641,979 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R2094:Casd1
|
UTSW |
6 |
4,608,705 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R3793:Casd1
|
UTSW |
6 |
4,619,876 (GRCm38) |
missense |
possibly damaging |
0.90 |
|
R3896:Casd1
|
UTSW |
6 |
4,640,980 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R4519:Casd1
|
UTSW |
6 |
4,621,102 (GRCm38) |
missense |
probably benign |
0.00 |
|
R4610:Casd1
|
UTSW |
6 |
4,631,165 (GRCm38) |
critical splice donor site |
probably null |
|
|
R4673:Casd1
|
UTSW |
6 |
4,629,975 (GRCm38) |
missense |
probably damaging |
0.97 |
|
R4819:Casd1
|
UTSW |
6 |
4,621,225 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R5920:Casd1
|
UTSW |
6 |
4,641,853 (GRCm38) |
missense |
probably null |
1.00 |
|
R5929:Casd1
|
UTSW |
6 |
4,629,993 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6130:Casd1
|
UTSW |
6 |
4,641,948 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6181:Casd1
|
UTSW |
6 |
4,619,331 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6291:Casd1
|
UTSW |
6 |
4,619,834 (GRCm38) |
missense |
probably damaging |
0.96 |
|
R6305:Casd1
|
UTSW |
6 |
4,641,892 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R7147:Casd1
|
UTSW |
6 |
4,624,187 (GRCm38) |
missense |
probably benign |
0.07 |
|
R7150:Casd1
|
UTSW |
6 |
4,624,211 (GRCm38) |
missense |
probably benign |
0.01 |
|
R7657:Casd1
|
UTSW |
6 |
4,619,773 (GRCm38) |
missense |
probably benign |
0.00 |
|
R7983:Casd1
|
UTSW |
6 |
4,624,472 (GRCm38) |
nonsense |
probably null |
|
|
R8033:Casd1
|
UTSW |
6 |
4,619,773 (GRCm38) |
missense |
probably benign |
0.00 |
|
R8234:Casd1
|
UTSW |
6 |
4,601,209 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R8748:Casd1
|
UTSW |
6 |
4,608,634 (GRCm38) |
missense |
probably benign |
0.02 |
|
R8985:Casd1
|
UTSW |
6 |
4,624,399 (GRCm38) |
nonsense |
probably null |
|
|
X0021:Casd1
|
UTSW |
6 |
4,641,935 (GRCm38) |
missense |
probably damaging |
1.00 |
|
Z1177:Casd1
|
UTSW |
6 |
4,631,531 (GRCm38) |
missense |
possibly damaging |
0.72 |
|
| Predicted Primers |
PCR Primer
(F):5'- AGTCAGAATCTCAGCGGTAGCCAC -3'
(R):5'- CATAAACAGGTTTGCACGGTCACAC -3'
Sequencing Primer
(F):5'- CAGCGGTAGCCACAGGAG -3'
(R):5'- GGTTTGCACGGTCACACATATAG -3'
|
| Posted On |
2014-05-09 |
Incidental Mutation