Incidental Mutation 'R8944:Shank2'
ID 681167
Institutional Source Beutler Lab
Gene Symbol Shank2
Ensembl Gene ENSMUSG00000037541
Gene Name SH3 and multiple ankyrin repeat domains 2
Synonyms ProSAP1
MMRRC Submission 068783-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R8944 (G1)
Quality Score 219.009
Status Validated
Chromosome 7
Chromosomal Location 143555665-143978231 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 143623927 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamine to Arginine at position 304 (Q304R)
Ref Sequence ENSEMBL: ENSMUSP00000101522 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000105902] [ENSMUST00000213146]
AlphaFold no structure available at present
Predicted Effect probably damaging
Transcript: ENSMUST00000105902
AA Change: Q304R

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000101522
Gene: ENSMUSG00000037541
AA Change: Q304R

DomainStartEndE-ValueType
low complexity region 15 28 N/A INTRINSIC
Pfam:FERM_f0 57 140 1.4e-21 PFAM
ANK 196 226 1.4e1 SMART
ANK 230 259 2.77e-3 SMART
ANK 263 293 1.42e0 SMART
ANK 297 326 1.25e-1 SMART
ANK 330 359 7.83e-3 SMART
ANK 363 391 1.29e2 SMART
SH3 529 584 1.04e-14 SMART
PDZ 635 720 1.75e-14 SMART
low complexity region 724 743 N/A INTRINSIC
low complexity region 878 893 N/A INTRINSIC
low complexity region 1031 1043 N/A INTRINSIC
low complexity region 1118 1129 N/A INTRINSIC
low complexity region 1149 1161 N/A INTRINSIC
low complexity region 1198 1216 N/A INTRINSIC
low complexity region 1393 1407 N/A INTRINSIC
low complexity region 1462 1473 N/A INTRINSIC
low complexity region 1494 1516 N/A INTRINSIC
low complexity region 1530 1546 N/A INTRINSIC
low complexity region 1568 1576 N/A INTRINSIC
low complexity region 1656 1670 N/A INTRINSIC
low complexity region 1713 1728 N/A INTRINSIC
low complexity region 1752 1766 N/A INTRINSIC
SAM 1775 1841 2.52e-23 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000213146
AA Change: Q304R

PolyPhen 2 Score 0.439 (Sensitivity: 0.89; Specificity: 0.90)
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency 100% (88/88)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein that is a member of the Shank family of synaptic proteins that may function as molecular scaffolds in the postsynaptic density of excitatory synapses. Shank proteins contain multiple domains for protein-protein interaction, including ankyrin repeats, and an SH3 domain. This particular family member contains a PDZ domain, a consensus sequence for cortactin SH3 domain-binding peptides and a sterile alpha motif. The alternative splicing demonstrated in Shank genes has been suggested as a mechanism for regulating the molecular structure of Shank and the spectrum of Shank-interacting proteins in the postsynaptic densities of the adult and developing brain. Alterations in the encoded protein may be associated with susceptibility to autism spectrum disorder. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2014]
PHENOTYPE: Mice homozygous for null mutations display hyperactivity and abnormal social behavior. Mice homozygous for one null allele also display partial postnal lethality and limb grasping. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 90 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4933427D14Rik A T 11: 72,049,851 (GRCm39) probably benign Het
A830018L16Rik A T 1: 11,484,706 (GRCm39) probably benign Het
Acox1 C T 11: 116,066,040 (GRCm39) R454H probably damaging Het
Acte1 G T 7: 143,434,902 (GRCm39) probably null Het
Adam18 A G 8: 25,164,703 (GRCm39) L4P probably damaging Het
AI182371 A C 2: 34,990,622 (GRCm39) L25R probably damaging Het
Ankrd12 A C 17: 66,277,195 (GRCm39) Y2026* probably null Het
Atad5 C T 11: 79,986,524 (GRCm39) T537M possibly damaging Het
Atosa A G 9: 74,911,562 (GRCm39) Y11C probably damaging Het
Avil G T 10: 126,846,455 (GRCm39) G420V probably damaging Het
Bche A T 3: 73,608,008 (GRCm39) F473I probably damaging Het
Borcs5 T C 6: 134,621,437 (GRCm39) probably null Het
C4b T C 17: 34,961,913 (GRCm39) Q111R probably benign Het
Carmil2 T A 8: 106,417,437 (GRCm39) I565N probably damaging Het
Cd74 T C 18: 60,943,127 (GRCm39) M155T probably damaging Het
Chrnd G T 1: 87,119,997 (GRCm39) R105L probably damaging Het
Clpp G T 17: 57,300,553 (GRCm39) E217* probably null Het
Cpq T A 15: 33,594,269 (GRCm39) Y427N probably damaging Het
Crxos G A 7: 15,636,900 (GRCm39) E54K possibly damaging Het
Dcaf13 A G 15: 39,001,612 (GRCm39) R307G possibly damaging Het
Ddx55 A G 5: 124,706,788 (GRCm39) D595G probably damaging Het
Dld T A 12: 31,390,868 (GRCm39) I193F possibly damaging Het
Dnah11 T G 12: 118,091,381 (GRCm39) E917A possibly damaging Het
Dnai2 T A 11: 114,641,302 (GRCm39) Y376N possibly damaging Het
Dock7 A G 4: 98,829,243 (GRCm39) Y2078H probably damaging Het
Dusp4 A T 8: 35,274,941 (GRCm39) N20I probably benign Het
Dzank1 A G 2: 144,333,729 (GRCm39) L367P probably benign Het
Eea1 T A 10: 95,832,822 (GRCm39) D222E probably damaging Het
Erich3 G C 3: 154,462,692 (GRCm39) R742S Het
Erich6 C T 3: 58,537,275 (GRCm39) M246I probably benign Het
Galnt16 T G 12: 80,623,314 (GRCm39) I158S probably damaging Het
Gm28363 A G 1: 117,655,080 (GRCm39) T100A possibly damaging Het
Gm8257 A T 14: 44,893,849 (GRCm39) Y36N probably damaging Het
Gmpr2 T C 14: 55,913,149 (GRCm39) V142A possibly damaging Het
Grid2ip T C 5: 143,366,260 (GRCm39) probably null Het
Hamp2 A G 7: 30,622,001 (GRCm39) F63L possibly damaging Het
Hmga2 T C 10: 120,309,159 (GRCm39) K66E probably damaging Het
Hspa1a T C 17: 35,190,019 (GRCm39) T295A probably benign Het
Ift74 G A 4: 94,510,128 (GRCm39) G53D probably damaging Het
Ighv6-7 T C 12: 114,419,703 (GRCm39) M1V probably null Het
Ints4 T A 7: 97,183,593 (GRCm39) D769E probably benign Het
Kif7 G A 7: 79,360,005 (GRCm39) R411C probably damaging Het
Klhl30 T A 1: 91,287,174 (GRCm39) Y487N probably damaging Het
Kras T C 6: 145,170,853 (GRCm39) E174G probably benign Het
Krt84 T C 15: 101,437,183 (GRCm39) I327V probably benign Het
Lamb3 T A 1: 193,014,525 (GRCm39) C561* probably null Het
Lmbrd1 A G 1: 24,767,407 (GRCm39) probably benign Het
Lmnb1 T A 18: 56,876,331 (GRCm39) S480T probably benign Het
Lrp2 C T 2: 69,341,348 (GRCm39) G944D probably damaging Het
Mta3 G A 17: 84,083,146 (GRCm39) E280K probably damaging Het
Muc5b A T 7: 141,421,115 (GRCm39) I4236F Het
Myh9 T C 15: 77,655,432 (GRCm39) T1175A probably benign Het
Myt1l T A 12: 29,861,564 (GRCm39) D115E unknown Het
Naa25 A G 5: 121,552,573 (GRCm39) N167D probably benign Het
Ncam1 G A 9: 49,431,493 (GRCm39) P648L probably damaging Het
Or2t26 T C 11: 49,039,266 (GRCm39) Y61H probably damaging Het
Or2t44 A T 11: 58,677,519 (GRCm39) D153V probably damaging Het
P3h3 G T 6: 124,832,196 (GRCm39) A230E possibly damaging Het
Pacs2 A G 12: 113,020,476 (GRCm39) E253G probably damaging Het
Pbld1 A T 10: 62,901,648 (GRCm39) D57V probably benign Het
Pcsk5 T C 19: 17,452,275 (GRCm39) T1077A probably damaging Het
Pou4f2 T A 8: 79,161,932 (GRCm39) M224L Het
Ppcdc C T 9: 57,342,265 (GRCm39) R19H probably benign Het
Ppp1r10 T A 17: 36,241,018 (GRCm39) M640K probably benign Het
Prdx6 A T 1: 161,069,432 (GRCm39) probably benign Het
Rab40b A G 11: 121,250,384 (GRCm39) probably null Het
Rassf9 T A 10: 102,381,329 (GRCm39) M237K probably benign Het
Rbbp8nl G T 2: 179,919,769 (GRCm39) Y604* probably null Het
Reep2 G T 18: 34,975,929 (GRCm39) W42L possibly damaging Het
Serpinb6e A T 13: 34,017,261 (GRCm39) M253K probably damaging Het
Slk T C 19: 47,600,057 (GRCm39) M120T probably damaging Het
Spata31e5 T C 1: 28,816,155 (GRCm39) I626V probably benign Het
Sphkap T A 1: 83,256,927 (GRCm39) H274L probably benign Het
Stc1 T G 14: 69,269,884 (GRCm39) F155V possibly damaging Het
Tbc1d12 A G 19: 38,899,510 (GRCm39) T477A probably damaging Het
Tmem19 T A 10: 115,183,671 (GRCm39) I54F possibly damaging Het
Tmem62 G A 2: 120,817,316 (GRCm39) probably null Het
Ttc6 A T 12: 57,689,826 (GRCm39) R505S Het
Ttn G T 2: 76,623,184 (GRCm39) R15418S probably damaging Het
Ugt2a3 C A 5: 87,473,417 (GRCm39) C500F possibly damaging Het
Ugt2b35 T C 5: 87,149,310 (GRCm39) F187S probably benign Het
Ung T A 5: 114,269,456 (GRCm39) I56N probably damaging Het
Vmn1r17 G T 6: 57,338,142 (GRCm39) F25L probably benign Het
Vmn1r29 C A 6: 58,284,274 (GRCm39) probably benign Het
Vps26c T A 16: 94,302,481 (GRCm39) I242F probably benign Het
Wdhd1 T C 14: 47,504,470 (GRCm39) D368G probably benign Het
Wdr3 A T 3: 100,057,259 (GRCm39) I448N probably damaging Het
Wdr47 T A 3: 108,550,480 (GRCm39) M835K possibly damaging Het
Wt1 G A 2: 104,957,584 (GRCm39) G10D possibly damaging Het
Zdhhc19 G A 16: 32,316,500 (GRCm39) G85D probably damaging Het
Other mutations in Shank2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00332:Shank2 APN 7 143,965,584 (GRCm39) missense probably damaging 1.00
IGL00516:Shank2 APN 7 143,964,512 (GRCm39) missense possibly damaging 0.96
IGL00919:Shank2 APN 7 143,965,008 (GRCm39) missense probably damaging 0.97
IGL01450:Shank2 APN 7 143,838,805 (GRCm39) nonsense probably null
IGL01996:Shank2 APN 7 143,965,230 (GRCm39) missense probably damaging 1.00
IGL02217:Shank2 APN 7 143,838,784 (GRCm39) missense possibly damaging 0.59
IGL02314:Shank2 APN 7 143,965,008 (GRCm39) missense probably benign 0.01
IGL02320:Shank2 APN 7 143,974,681 (GRCm39) missense probably damaging 1.00
IGL02948:Shank2 APN 7 143,963,373 (GRCm39) missense probably benign 0.03
IGL02997:Shank2 APN 7 143,635,610 (GRCm39) missense probably benign 0.16
R0077:Shank2 UTSW 7 143,746,204 (GRCm39) missense possibly damaging 0.85
R0109:Shank2 UTSW 7 143,964,314 (GRCm39) missense possibly damaging 0.81
R0126:Shank2 UTSW 7 143,585,092 (GRCm39) missense probably damaging 0.99
R0153:Shank2 UTSW 7 143,623,872 (GRCm39) missense probably benign 0.04
R0644:Shank2 UTSW 7 143,965,586 (GRCm39) missense probably benign
R1072:Shank2 UTSW 7 143,965,305 (GRCm39) missense probably damaging 1.00
R1245:Shank2 UTSW 7 143,965,457 (GRCm39) missense probably benign 0.00
R1424:Shank2 UTSW 7 143,606,109 (GRCm39) missense probably damaging 0.99
R1712:Shank2 UTSW 7 143,964,890 (GRCm39) missense probably damaging 1.00
R1739:Shank2 UTSW 7 143,733,590 (GRCm39) missense probably damaging 1.00
R1791:Shank2 UTSW 7 143,964,336 (GRCm39) missense probably damaging 1.00
R1889:Shank2 UTSW 7 143,740,595 (GRCm39) nonsense probably null
R2074:Shank2 UTSW 7 143,963,277 (GRCm39) missense probably damaging 1.00
R2135:Shank2 UTSW 7 143,964,971 (GRCm39) missense probably damaging 0.99
R2355:Shank2 UTSW 7 143,611,455 (GRCm39) missense possibly damaging 0.94
R2511:Shank2 UTSW 7 143,965,314 (GRCm39) missense probably damaging 1.00
R2517:Shank2 UTSW 7 143,606,042 (GRCm39) missense possibly damaging 0.89
R2570:Shank2 UTSW 7 143,622,507 (GRCm39) missense probably damaging 1.00
R2846:Shank2 UTSW 7 143,623,792 (GRCm39) missense probably damaging 1.00
R3159:Shank2 UTSW 7 143,635,611 (GRCm39) missense probably damaging 0.98
R3881:Shank2 UTSW 7 143,959,121 (GRCm39) missense probably benign
R3907:Shank2 UTSW 7 143,963,313 (GRCm39) missense probably damaging 1.00
R3938:Shank2 UTSW 7 143,682,112 (GRCm39) missense probably benign 0.20
R4151:Shank2 UTSW 7 143,608,565 (GRCm39) missense probably damaging 1.00
R4369:Shank2 UTSW 7 143,733,518 (GRCm39) missense probably damaging 0.99
R4372:Shank2 UTSW 7 143,964,599 (GRCm39) missense probably benign 0.09
R4519:Shank2 UTSW 7 143,963,942 (GRCm39) missense probably damaging 1.00
R4627:Shank2 UTSW 7 143,965,161 (GRCm39) missense probably damaging 1.00
R4645:Shank2 UTSW 7 143,964,159 (GRCm39) missense possibly damaging 0.65
R4647:Shank2 UTSW 7 143,965,566 (GRCm39) missense probably damaging 1.00
R4689:Shank2 UTSW 7 143,974,342 (GRCm39) missense probably benign 0.07
R4751:Shank2 UTSW 7 143,963,205 (GRCm39) missense probably damaging 1.00
R4816:Shank2 UTSW 7 143,606,043 (GRCm39) missense probably damaging 1.00
R4843:Shank2 UTSW 7 143,585,146 (GRCm39) missense probably benign 0.17
R4929:Shank2 UTSW 7 143,965,008 (GRCm39) missense probably benign 0.01
R5009:Shank2 UTSW 7 143,623,916 (GRCm39) missense probably benign 0.00
R5027:Shank2 UTSW 7 143,812,842 (GRCm39) nonsense probably null
R5165:Shank2 UTSW 7 143,963,373 (GRCm39) missense possibly damaging 0.62
R5278:Shank2 UTSW 7 143,622,612 (GRCm39) critical splice donor site probably null
R5332:Shank2 UTSW 7 143,965,029 (GRCm39) missense possibly damaging 0.82
R5497:Shank2 UTSW 7 143,963,271 (GRCm39) missense probably damaging 1.00
R5525:Shank2 UTSW 7 143,623,846 (GRCm39) missense probably damaging 1.00
R5575:Shank2 UTSW 7 143,963,871 (GRCm39) missense probably damaging 1.00
R5948:Shank2 UTSW 7 143,960,960 (GRCm39) missense probably damaging 0.98
R6024:Shank2 UTSW 7 143,733,768 (GRCm39) missense probably benign 0.12
R6306:Shank2 UTSW 7 143,963,417 (GRCm39) missense probably benign 0.00
R6317:Shank2 UTSW 7 143,838,821 (GRCm39) missense possibly damaging 0.89
R6358:Shank2 UTSW 7 143,585,034 (GRCm39) missense probably benign 0.25
R6364:Shank2 UTSW 7 143,964,146 (GRCm39) missense probably benign 0.14
R6413:Shank2 UTSW 7 143,963,955 (GRCm39) missense probably damaging 1.00
R6680:Shank2 UTSW 7 143,974,603 (GRCm39) missense probably damaging 1.00
R6834:Shank2 UTSW 7 143,963,631 (GRCm39) missense probably damaging 1.00
R6870:Shank2 UTSW 7 143,606,197 (GRCm39) missense probably damaging 0.99
R6933:Shank2 UTSW 7 143,645,515 (GRCm39) missense probably benign 0.19
R6983:Shank2 UTSW 7 143,635,585 (GRCm39) missense possibly damaging 0.94
R7082:Shank2 UTSW 7 143,964,096 (GRCm39) missense probably damaging 0.99
R7100:Shank2 UTSW 7 143,964,901 (GRCm39) missense possibly damaging 0.73
R7111:Shank2 UTSW 7 143,965,289 (GRCm39) missense probably benign 0.00
R7213:Shank2 UTSW 7 143,585,146 (GRCm39) missense probably benign 0.17
R7225:Shank2 UTSW 7 143,838,762 (GRCm39) missense probably benign 0.42
R7325:Shank2 UTSW 7 143,965,422 (GRCm39) missense probably benign 0.04
R7605:Shank2 UTSW 7 143,645,516 (GRCm39) missense possibly damaging 0.64
R7909:Shank2 UTSW 7 143,965,131 (GRCm39) missense probably damaging 1.00
R7976:Shank2 UTSW 7 143,964,798 (GRCm39) missense probably damaging 0.99
R8118:Shank2 UTSW 7 143,963,612 (GRCm39) missense probably benign 0.01
R8722:Shank2 UTSW 7 143,729,485 (GRCm39) intron probably benign
R8866:Shank2 UTSW 7 143,964,986 (GRCm39) missense probably benign
R8919:Shank2 UTSW 7 143,965,265 (GRCm39) missense probably damaging 1.00
R9033:Shank2 UTSW 7 143,965,236 (GRCm39) missense probably damaging 0.99
R9091:Shank2 UTSW 7 143,963,705 (GRCm39) missense possibly damaging 0.76
R9252:Shank2 UTSW 7 143,622,535 (GRCm39) missense possibly damaging 0.96
R9270:Shank2 UTSW 7 143,963,705 (GRCm39) missense possibly damaging 0.76
R9350:Shank2 UTSW 7 143,960,945 (GRCm39) missense probably benign 0.00
R9362:Shank2 UTSW 7 143,963,271 (GRCm39) missense probably damaging 1.00
R9471:Shank2 UTSW 7 143,964,752 (GRCm39) missense possibly damaging 0.77
R9524:Shank2 UTSW 7 143,964,183 (GRCm39) missense possibly damaging 0.71
R9557:Shank2 UTSW 7 143,963,847 (GRCm39) missense probably benign 0.00
R9559:Shank2 UTSW 7 143,585,041 (GRCm39) missense probably benign 0.30
R9574:Shank2 UTSW 7 143,622,462 (GRCm39) missense possibly damaging 0.90
R9680:Shank2 UTSW 7 143,964,837 (GRCm39) missense probably damaging 0.96
R9720:Shank2 UTSW 7 143,682,137 (GRCm39) missense probably damaging 0.99
RF009:Shank2 UTSW 7 143,965,308 (GRCm39) missense possibly damaging 0.81
Z1176:Shank2 UTSW 7 143,682,114 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- ACATGTGTATTCATTCCGTGTACG -3'
(R):5'- CTCACGTGGCCACTGAATTTC -3'

Sequencing Primer
(F):5'- GTATTCATTCCGTGTACGAGACCAG -3'
(R):5'- TTCTCCTGCACAGTGGGAAATAGC -3'
Posted On 2021-08-31