Incidental Mutation 'R8944:Sphkap'
ID 681131
Institutional Source Beutler Lab
Gene Symbol Sphkap
Ensembl Gene ENSMUSG00000026163
Gene Name SPHK1 interactor, AKAP domain containing
Synonyms SKIP, A930009L15Rik, 4930544G21Rik
MMRRC Submission 068783-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.079) question?
Stock # R8944 (G1)
Quality Score 225.009
Status Validated
Chromosome 1
Chromosomal Location 83233163-83385853 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 83256927 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Histidine to Leucine at position 274 (H274L)
Ref Sequence ENSEMBL: ENSMUSP00000124872 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000159078] [ENSMUST00000160953]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000159078
SMART Domains Protein: ENSMUSP00000124384
Gene: ENSMUSG00000026163

DomainStartEndE-ValueType
low complexity region 303 314 N/A INTRINSIC
SCOP:d1ash__ 382 462 5e-3 SMART
low complexity region 809 819 N/A INTRINSIC
low complexity region 854 865 N/A INTRINSIC
low complexity region 1202 1221 N/A INTRINSIC
low complexity region 1243 1254 N/A INTRINSIC
Pfam:AKAP_110 1281 1398 7.5e-13 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000160953
AA Change: H274L

PolyPhen 2 Score 0.387 (Sensitivity: 0.90; Specificity: 0.89)
SMART Domains Protein: ENSMUSP00000124872
Gene: ENSMUSG00000026163
AA Change: H274L

DomainStartEndE-ValueType
low complexity region 590 601 N/A INTRINSIC
SCOP:d1ash__ 669 749 6e-3 SMART
low complexity region 1096 1106 N/A INTRINSIC
low complexity region 1141 1152 N/A INTRINSIC
low complexity region 1489 1508 N/A INTRINSIC
Pfam:AKAP_110 1540 1655 6.4e-12 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency 100% (88/88)
Allele List at MGI
Other mutations in this stock
Total: 90 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4933427D14Rik A T 11: 72,049,851 (GRCm39) probably benign Het
A830018L16Rik A T 1: 11,484,706 (GRCm39) probably benign Het
Acox1 C T 11: 116,066,040 (GRCm39) R454H probably damaging Het
Acte1 G T 7: 143,434,902 (GRCm39) probably null Het
Adam18 A G 8: 25,164,703 (GRCm39) L4P probably damaging Het
AI182371 A C 2: 34,990,622 (GRCm39) L25R probably damaging Het
Ankrd12 A C 17: 66,277,195 (GRCm39) Y2026* probably null Het
Atad5 C T 11: 79,986,524 (GRCm39) T537M possibly damaging Het
Atosa A G 9: 74,911,562 (GRCm39) Y11C probably damaging Het
Avil G T 10: 126,846,455 (GRCm39) G420V probably damaging Het
Bche A T 3: 73,608,008 (GRCm39) F473I probably damaging Het
Borcs5 T C 6: 134,621,437 (GRCm39) probably null Het
C4b T C 17: 34,961,913 (GRCm39) Q111R probably benign Het
Carmil2 T A 8: 106,417,437 (GRCm39) I565N probably damaging Het
Cd74 T C 18: 60,943,127 (GRCm39) M155T probably damaging Het
Chrnd G T 1: 87,119,997 (GRCm39) R105L probably damaging Het
Clpp G T 17: 57,300,553 (GRCm39) E217* probably null Het
Cpq T A 15: 33,594,269 (GRCm39) Y427N probably damaging Het
Crxos G A 7: 15,636,900 (GRCm39) E54K possibly damaging Het
Dcaf13 A G 15: 39,001,612 (GRCm39) R307G possibly damaging Het
Ddx55 A G 5: 124,706,788 (GRCm39) D595G probably damaging Het
Dld T A 12: 31,390,868 (GRCm39) I193F possibly damaging Het
Dnah11 T G 12: 118,091,381 (GRCm39) E917A possibly damaging Het
Dnai2 T A 11: 114,641,302 (GRCm39) Y376N possibly damaging Het
Dock7 A G 4: 98,829,243 (GRCm39) Y2078H probably damaging Het
Dusp4 A T 8: 35,274,941 (GRCm39) N20I probably benign Het
Dzank1 A G 2: 144,333,729 (GRCm39) L367P probably benign Het
Eea1 T A 10: 95,832,822 (GRCm39) D222E probably damaging Het
Erich3 G C 3: 154,462,692 (GRCm39) R742S Het
Erich6 C T 3: 58,537,275 (GRCm39) M246I probably benign Het
Galnt16 T G 12: 80,623,314 (GRCm39) I158S probably damaging Het
Gm28363 A G 1: 117,655,080 (GRCm39) T100A possibly damaging Het
Gm8257 A T 14: 44,893,849 (GRCm39) Y36N probably damaging Het
Gmpr2 T C 14: 55,913,149 (GRCm39) V142A possibly damaging Het
Grid2ip T C 5: 143,366,260 (GRCm39) probably null Het
Hamp2 A G 7: 30,622,001 (GRCm39) F63L possibly damaging Het
Hmga2 T C 10: 120,309,159 (GRCm39) K66E probably damaging Het
Hspa1a T C 17: 35,190,019 (GRCm39) T295A probably benign Het
Ift74 G A 4: 94,510,128 (GRCm39) G53D probably damaging Het
Ighv6-7 T C 12: 114,419,703 (GRCm39) M1V probably null Het
Ints4 T A 7: 97,183,593 (GRCm39) D769E probably benign Het
Kif7 G A 7: 79,360,005 (GRCm39) R411C probably damaging Het
Klhl30 T A 1: 91,287,174 (GRCm39) Y487N probably damaging Het
Kras T C 6: 145,170,853 (GRCm39) E174G probably benign Het
Krt84 T C 15: 101,437,183 (GRCm39) I327V probably benign Het
Lamb3 T A 1: 193,014,525 (GRCm39) C561* probably null Het
Lmbrd1 A G 1: 24,767,407 (GRCm39) probably benign Het
Lmnb1 T A 18: 56,876,331 (GRCm39) S480T probably benign Het
Lrp2 C T 2: 69,341,348 (GRCm39) G944D probably damaging Het
Mta3 G A 17: 84,083,146 (GRCm39) E280K probably damaging Het
Muc5b A T 7: 141,421,115 (GRCm39) I4236F Het
Myh9 T C 15: 77,655,432 (GRCm39) T1175A probably benign Het
Myt1l T A 12: 29,861,564 (GRCm39) D115E unknown Het
Naa25 A G 5: 121,552,573 (GRCm39) N167D probably benign Het
Ncam1 G A 9: 49,431,493 (GRCm39) P648L probably damaging Het
Or2t26 T C 11: 49,039,266 (GRCm39) Y61H probably damaging Het
Or2t44 A T 11: 58,677,519 (GRCm39) D153V probably damaging Het
P3h3 G T 6: 124,832,196 (GRCm39) A230E possibly damaging Het
Pacs2 A G 12: 113,020,476 (GRCm39) E253G probably damaging Het
Pbld1 A T 10: 62,901,648 (GRCm39) D57V probably benign Het
Pcsk5 T C 19: 17,452,275 (GRCm39) T1077A probably damaging Het
Pou4f2 T A 8: 79,161,932 (GRCm39) M224L Het
Ppcdc C T 9: 57,342,265 (GRCm39) R19H probably benign Het
Ppp1r10 T A 17: 36,241,018 (GRCm39) M640K probably benign Het
Prdx6 A T 1: 161,069,432 (GRCm39) probably benign Het
Rab40b A G 11: 121,250,384 (GRCm39) probably null Het
Rassf9 T A 10: 102,381,329 (GRCm39) M237K probably benign Het
Rbbp8nl G T 2: 179,919,769 (GRCm39) Y604* probably null Het
Reep2 G T 18: 34,975,929 (GRCm39) W42L possibly damaging Het
Serpinb6e A T 13: 34,017,261 (GRCm39) M253K probably damaging Het
Shank2 A G 7: 143,623,927 (GRCm39) Q304R probably damaging Het
Slk T C 19: 47,600,057 (GRCm39) M120T probably damaging Het
Spata31e5 T C 1: 28,816,155 (GRCm39) I626V probably benign Het
Stc1 T G 14: 69,269,884 (GRCm39) F155V possibly damaging Het
Tbc1d12 A G 19: 38,899,510 (GRCm39) T477A probably damaging Het
Tmem19 T A 10: 115,183,671 (GRCm39) I54F possibly damaging Het
Tmem62 G A 2: 120,817,316 (GRCm39) probably null Het
Ttc6 A T 12: 57,689,826 (GRCm39) R505S Het
Ttn G T 2: 76,623,184 (GRCm39) R15418S probably damaging Het
Ugt2a3 C A 5: 87,473,417 (GRCm39) C500F possibly damaging Het
Ugt2b35 T C 5: 87,149,310 (GRCm39) F187S probably benign Het
Ung T A 5: 114,269,456 (GRCm39) I56N probably damaging Het
Vmn1r17 G T 6: 57,338,142 (GRCm39) F25L probably benign Het
Vmn1r29 C A 6: 58,284,274 (GRCm39) probably benign Het
Vps26c T A 16: 94,302,481 (GRCm39) I242F probably benign Het
Wdhd1 T C 14: 47,504,470 (GRCm39) D368G probably benign Het
Wdr3 A T 3: 100,057,259 (GRCm39) I448N probably damaging Het
Wdr47 T A 3: 108,550,480 (GRCm39) M835K possibly damaging Het
Wt1 G A 2: 104,957,584 (GRCm39) G10D possibly damaging Het
Zdhhc19 G A 16: 32,316,500 (GRCm39) G85D probably damaging Het
Other mutations in Sphkap
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00332:Sphkap APN 1 83,258,237 (GRCm39) missense probably damaging 1.00
IGL00337:Sphkap APN 1 83,317,329 (GRCm39) missense probably damaging 1.00
IGL00470:Sphkap APN 1 83,255,631 (GRCm39) missense possibly damaging 0.87
IGL00577:Sphkap APN 1 83,256,565 (GRCm39) missense probably damaging 1.00
IGL00657:Sphkap APN 1 83,254,096 (GRCm39) missense probably damaging 1.00
IGL01868:Sphkap APN 1 83,258,120 (GRCm39) splice site probably null
IGL02101:Sphkap APN 1 83,268,708 (GRCm39) missense probably damaging 1.00
IGL02471:Sphkap APN 1 83,253,897 (GRCm39) missense probably damaging 1.00
IGL02943:Sphkap APN 1 83,254,552 (GRCm39) missense probably damaging 1.00
IGL02945:Sphkap APN 1 83,254,552 (GRCm39) missense probably damaging 1.00
IGL03008:Sphkap APN 1 83,254,552 (GRCm39) missense probably damaging 1.00
IGL03031:Sphkap APN 1 83,254,552 (GRCm39) missense probably damaging 1.00
IGL03059:Sphkap APN 1 83,234,963 (GRCm39) missense probably damaging 0.97
IGL03085:Sphkap APN 1 83,258,075 (GRCm39) missense possibly damaging 0.92
IGL03355:Sphkap APN 1 83,258,224 (GRCm39) missense probably damaging 1.00
IGL03356:Sphkap APN 1 83,254,552 (GRCm39) missense probably damaging 1.00
IGL03368:Sphkap APN 1 83,253,397 (GRCm39) missense probably benign 0.14
R0294:Sphkap UTSW 1 83,255,966 (GRCm39) missense possibly damaging 0.72
R0308:Sphkap UTSW 1 83,254,690 (GRCm39) missense probably damaging 1.00
R0478:Sphkap UTSW 1 83,256,432 (GRCm39) missense probably damaging 1.00
R0606:Sphkap UTSW 1 83,258,145 (GRCm39) missense probably damaging 1.00
R0678:Sphkap UTSW 1 83,256,349 (GRCm39) missense probably benign 0.03
R1216:Sphkap UTSW 1 83,268,698 (GRCm39) missense probably damaging 1.00
R1253:Sphkap UTSW 1 83,256,619 (GRCm39) missense possibly damaging 0.56
R1532:Sphkap UTSW 1 83,234,924 (GRCm39) missense probably damaging 1.00
R1635:Sphkap UTSW 1 83,256,121 (GRCm39) missense probably benign 0.03
R1655:Sphkap UTSW 1 83,255,236 (GRCm39) nonsense probably null
R1657:Sphkap UTSW 1 83,255,236 (GRCm39) nonsense probably null
R1700:Sphkap UTSW 1 83,255,236 (GRCm39) nonsense probably null
R1701:Sphkap UTSW 1 83,255,236 (GRCm39) nonsense probably null
R1734:Sphkap UTSW 1 83,255,236 (GRCm39) nonsense probably null
R1736:Sphkap UTSW 1 83,255,236 (GRCm39) nonsense probably null
R1743:Sphkap UTSW 1 83,255,236 (GRCm39) nonsense probably null
R1744:Sphkap UTSW 1 83,255,236 (GRCm39) nonsense probably null
R1760:Sphkap UTSW 1 83,255,265 (GRCm39) missense probably benign 0.29
R1893:Sphkap UTSW 1 83,256,687 (GRCm39) missense probably benign 0.02
R1937:Sphkap UTSW 1 83,245,162 (GRCm39) nonsense probably null
R1986:Sphkap UTSW 1 83,255,643 (GRCm39) missense probably damaging 1.00
R1993:Sphkap UTSW 1 83,255,236 (GRCm39) nonsense probably null
R1995:Sphkap UTSW 1 83,255,236 (GRCm39) nonsense probably null
R2001:Sphkap UTSW 1 83,254,383 (GRCm39) missense probably damaging 1.00
R2004:Sphkap UTSW 1 83,255,632 (GRCm39) missense probably benign 0.04
R2111:Sphkap UTSW 1 83,253,602 (GRCm39) missense probably benign 0.00
R2112:Sphkap UTSW 1 83,253,602 (GRCm39) missense probably benign 0.00
R2156:Sphkap UTSW 1 83,255,710 (GRCm39) missense probably benign 0.03
R2182:Sphkap UTSW 1 83,254,405 (GRCm39) missense probably damaging 1.00
R2271:Sphkap UTSW 1 83,234,942 (GRCm39) missense probably damaging 1.00
R3712:Sphkap UTSW 1 83,254,833 (GRCm39) missense probably benign 0.27
R3919:Sphkap UTSW 1 83,254,179 (GRCm39) missense probably damaging 1.00
R3980:Sphkap UTSW 1 83,245,215 (GRCm39) splice site probably null
R4130:Sphkap UTSW 1 83,255,619 (GRCm39) missense probably damaging 0.96
R4539:Sphkap UTSW 1 83,255,514 (GRCm39) missense probably benign 0.00
R4602:Sphkap UTSW 1 83,256,782 (GRCm39) nonsense probably null
R4735:Sphkap UTSW 1 83,256,838 (GRCm39) missense probably benign 0.01
R4793:Sphkap UTSW 1 83,255,805 (GRCm39) missense possibly damaging 0.77
R4849:Sphkap UTSW 1 83,255,105 (GRCm39) missense probably benign 0.03
R4880:Sphkap UTSW 1 83,266,538 (GRCm39) missense probably damaging 1.00
R5213:Sphkap UTSW 1 83,258,224 (GRCm39) missense probably damaging 1.00
R5277:Sphkap UTSW 1 83,253,885 (GRCm39) missense probably benign 0.04
R5331:Sphkap UTSW 1 83,254,503 (GRCm39) missense probably benign 0.08
R5632:Sphkap UTSW 1 83,256,006 (GRCm39) missense probably benign 0.01
R5647:Sphkap UTSW 1 83,385,720 (GRCm39) missense probably damaging 0.98
R5751:Sphkap UTSW 1 83,253,618 (GRCm39) missense probably benign 0.27
R5935:Sphkap UTSW 1 83,317,320 (GRCm39) missense probably damaging 1.00
R5999:Sphkap UTSW 1 83,245,126 (GRCm39) missense probably benign 0.02
R6232:Sphkap UTSW 1 83,258,200 (GRCm39) missense probably damaging 1.00
R6318:Sphkap UTSW 1 83,256,099 (GRCm39) missense probably damaging 1.00
R6474:Sphkap UTSW 1 83,256,544 (GRCm39) missense probably damaging 1.00
R6602:Sphkap UTSW 1 83,253,479 (GRCm39) missense possibly damaging 0.75
R6674:Sphkap UTSW 1 83,255,555 (GRCm39) missense probably benign 0.37
R6716:Sphkap UTSW 1 83,339,949 (GRCm39) critical splice donor site probably null
R6803:Sphkap UTSW 1 83,258,231 (GRCm39) missense probably damaging 1.00
R6880:Sphkap UTSW 1 83,234,978 (GRCm39) missense probably damaging 1.00
R6941:Sphkap UTSW 1 83,385,811 (GRCm39) start gained probably benign
R7170:Sphkap UTSW 1 83,243,706 (GRCm39) missense probably damaging 0.99
R7263:Sphkap UTSW 1 83,254,399 (GRCm39) missense probably damaging 1.00
R7422:Sphkap UTSW 1 83,241,547 (GRCm39) missense probably benign 0.02
R7640:Sphkap UTSW 1 83,256,649 (GRCm39) missense possibly damaging 0.94
R7722:Sphkap UTSW 1 83,256,642 (GRCm39) missense probably benign 0.00
R7810:Sphkap UTSW 1 83,254,021 (GRCm39) missense probably damaging 1.00
R7887:Sphkap UTSW 1 83,255,133 (GRCm39) missense probably benign 0.00
R7974:Sphkap UTSW 1 83,256,683 (GRCm39) missense probably damaging 1.00
R7990:Sphkap UTSW 1 83,245,066 (GRCm39) missense probably damaging 0.99
R8096:Sphkap UTSW 1 83,255,279 (GRCm39) missense probably damaging 0.98
R8110:Sphkap UTSW 1 83,256,492 (GRCm39) missense possibly damaging 0.82
R8125:Sphkap UTSW 1 83,241,303 (GRCm39) missense probably damaging 1.00
R8153:Sphkap UTSW 1 83,255,730 (GRCm39) missense possibly damaging 0.93
R8245:Sphkap UTSW 1 83,256,492 (GRCm39) missense probably benign 0.14
R8394:Sphkap UTSW 1 83,253,797 (GRCm39) missense probably benign 0.08
R8443:Sphkap UTSW 1 83,255,953 (GRCm39) missense probably benign 0.00
R8508:Sphkap UTSW 1 83,254,221 (GRCm39) missense probably damaging 1.00
R8531:Sphkap UTSW 1 83,254,909 (GRCm39) missense probably damaging 1.00
R8673:Sphkap UTSW 1 83,253,561 (GRCm39) missense probably benign 0.01
R8674:Sphkap UTSW 1 83,255,565 (GRCm39) missense probably benign 0.04
R8682:Sphkap UTSW 1 83,256,997 (GRCm39) missense probably benign 0.21
R8837:Sphkap UTSW 1 83,253,384 (GRCm39) missense possibly damaging 0.87
R8857:Sphkap UTSW 1 83,258,288 (GRCm39) missense probably damaging 1.00
R8902:Sphkap UTSW 1 83,256,685 (GRCm39) missense probably benign 0.21
R8916:Sphkap UTSW 1 83,255,108 (GRCm39) missense possibly damaging 0.87
R9154:Sphkap UTSW 1 83,234,982 (GRCm39) missense probably damaging 1.00
R9579:Sphkap UTSW 1 83,255,295 (GRCm39) missense probably damaging 0.99
R9616:Sphkap UTSW 1 83,254,989 (GRCm39) missense probably damaging 1.00
R9781:Sphkap UTSW 1 83,255,772 (GRCm39) missense possibly damaging 0.62
Z1088:Sphkap UTSW 1 83,256,325 (GRCm39) missense probably damaging 1.00
Z1088:Sphkap UTSW 1 83,254,329 (GRCm39) missense probably damaging 1.00
Z1176:Sphkap UTSW 1 83,258,163 (GRCm39) missense possibly damaging 0.61
Z1176:Sphkap UTSW 1 83,253,754 (GRCm39) nonsense probably null
Z1177:Sphkap UTSW 1 83,254,152 (GRCm39) missense probably damaging 0.96
Predicted Primers PCR Primer
(F):5'- TTCTTAACCATGGAGAGATAGGCATC -3'
(R):5'- TTGCTCCCTGGGAAGTAACAG -3'

Sequencing Primer
(F):5'- GCATCTCTAGGGATGAACAGCATTTG -3'
(R):5'- CTCCCTGGGAAGTAACAGTGTTTC -3'
Posted On 2021-08-31