Incidental Mutation 'R8971:Tnrc6c'
ID |
683117 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Tnrc6c
|
Ensembl Gene |
ENSMUSG00000025571 |
Gene Name |
trinucleotide repeat containing 6C |
Synonyms |
9930033H14Rik |
MMRRC Submission |
068805-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R8971 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
11 |
Chromosomal Location |
117545115-117654265 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 117640089 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Threonine
at position 1208
(I1208T)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000115221
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000026658]
[ENSMUST00000106344]
[ENSMUST00000138299]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000026658
AA Change: I1376T
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000026658 Gene: ENSMUSG00000025571 AA Change: I1376T
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
32 |
N/A |
INTRINSIC |
low complexity region
|
37 |
58 |
N/A |
INTRINSIC |
low complexity region
|
110 |
132 |
N/A |
INTRINSIC |
low complexity region
|
248 |
257 |
N/A |
INTRINSIC |
low complexity region
|
298 |
318 |
N/A |
INTRINSIC |
low complexity region
|
394 |
408 |
N/A |
INTRINSIC |
low complexity region
|
440 |
457 |
N/A |
INTRINSIC |
internal_repeat_1
|
472 |
573 |
2.14e-5 |
PROSPERO |
low complexity region
|
594 |
614 |
N/A |
INTRINSIC |
low complexity region
|
621 |
632 |
N/A |
INTRINSIC |
internal_repeat_2
|
639 |
704 |
5.49e-5 |
PROSPERO |
internal_repeat_1
|
799 |
902 |
2.14e-5 |
PROSPERO |
low complexity region
|
964 |
981 |
N/A |
INTRINSIC |
internal_repeat_2
|
991 |
1051 |
5.49e-5 |
PROSPERO |
low complexity region
|
1063 |
1079 |
N/A |
INTRINSIC |
low complexity region
|
1111 |
1125 |
N/A |
INTRINSIC |
UBA
|
1145 |
1182 |
3.68e-4 |
SMART |
Pfam:M_domain
|
1232 |
1459 |
6.8e-77 |
PFAM |
Pfam:TNRC6-PABC_bdg
|
1468 |
1646 |
4.1e-75 |
PFAM |
Pfam:TNRC6-PABC_bdg
|
1643 |
1722 |
3.7e-33 |
PFAM |
RRM
|
1725 |
1792 |
1.81e-2 |
SMART |
low complexity region
|
1813 |
1823 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000106344
AA Change: I1376T
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000101951 Gene: ENSMUSG00000025571 AA Change: I1376T
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
32 |
N/A |
INTRINSIC |
low complexity region
|
37 |
58 |
N/A |
INTRINSIC |
low complexity region
|
110 |
132 |
N/A |
INTRINSIC |
low complexity region
|
248 |
257 |
N/A |
INTRINSIC |
low complexity region
|
298 |
318 |
N/A |
INTRINSIC |
low complexity region
|
394 |
408 |
N/A |
INTRINSIC |
low complexity region
|
440 |
457 |
N/A |
INTRINSIC |
internal_repeat_1
|
472 |
573 |
2.14e-5 |
PROSPERO |
low complexity region
|
594 |
614 |
N/A |
INTRINSIC |
low complexity region
|
621 |
632 |
N/A |
INTRINSIC |
internal_repeat_2
|
639 |
704 |
5.49e-5 |
PROSPERO |
internal_repeat_1
|
799 |
902 |
2.14e-5 |
PROSPERO |
low complexity region
|
964 |
981 |
N/A |
INTRINSIC |
internal_repeat_2
|
991 |
1051 |
5.49e-5 |
PROSPERO |
low complexity region
|
1063 |
1079 |
N/A |
INTRINSIC |
low complexity region
|
1111 |
1125 |
N/A |
INTRINSIC |
UBA
|
1145 |
1182 |
3.68e-4 |
SMART |
Pfam:M_domain
|
1232 |
1459 |
6.8e-77 |
PFAM |
Pfam:TNRC6-PABC_bdg
|
1468 |
1646 |
4.1e-75 |
PFAM |
Pfam:TNRC6-PABC_bdg
|
1643 |
1722 |
3.7e-33 |
PFAM |
RRM
|
1725 |
1792 |
1.81e-2 |
SMART |
low complexity region
|
1813 |
1823 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000138299
AA Change: I1208T
PolyPhen 2
Score 0.948 (Sensitivity: 0.79; Specificity: 0.95)
|
SMART Domains |
Protein: ENSMUSP00000115221 Gene: ENSMUSG00000025571 AA Change: I1208T
Domain | Start | End | E-Value | Type |
low complexity region
|
88 |
97 |
N/A |
INTRINSIC |
low complexity region
|
138 |
158 |
N/A |
INTRINSIC |
low complexity region
|
234 |
248 |
N/A |
INTRINSIC |
low complexity region
|
280 |
297 |
N/A |
INTRINSIC |
internal_repeat_1
|
312 |
413 |
9.45e-5 |
PROSPERO |
low complexity region
|
434 |
454 |
N/A |
INTRINSIC |
low complexity region
|
461 |
472 |
N/A |
INTRINSIC |
internal_repeat_1
|
639 |
742 |
9.45e-5 |
PROSPERO |
low complexity region
|
804 |
821 |
N/A |
INTRINSIC |
low complexity region
|
903 |
919 |
N/A |
INTRINSIC |
low complexity region
|
951 |
965 |
N/A |
INTRINSIC |
UBA
|
985 |
1022 |
3.68e-4 |
SMART |
Pfam:M_domain
|
1036 |
1293 |
1.7e-53 |
PFAM |
low complexity region
|
1397 |
1406 |
N/A |
INTRINSIC |
PDB:3KTP|B
|
1422 |
1443 |
7e-7 |
PDB |
low complexity region
|
1507 |
1518 |
N/A |
INTRINSIC |
low complexity region
|
1531 |
1552 |
N/A |
INTRINSIC |
RRM
|
1557 |
1624 |
1.81e-2 |
SMART |
low complexity region
|
1645 |
1655 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.7%
- 20x: 99.0%
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Mice homozygous for a gene trap allele exhibit complete neonatal lethality with cyanosis, respiratory distress and thickened mesenchyme in air sacs. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 86 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
9230112D13Rik |
T |
C |
14: 34,236,383 (GRCm39) |
H44R |
unknown |
Het |
Acp6 |
C |
T |
3: 97,078,961 (GRCm39) |
H254Y |
probably damaging |
Het |
Acvrl1 |
A |
G |
15: 101,033,404 (GRCm39) |
N97S |
possibly damaging |
Het |
Afm |
T |
A |
5: 90,696,675 (GRCm39) |
V455E |
probably damaging |
Het |
Ankrd44 |
G |
T |
1: 54,692,952 (GRCm39) |
D927E |
probably benign |
Het |
Ap2a2 |
T |
C |
7: 141,191,258 (GRCm39) |
V275A |
probably benign |
Het |
Arfgef2 |
A |
T |
2: 166,701,221 (GRCm39) |
Q673L |
probably damaging |
Het |
Atp6v0a2 |
T |
C |
5: 124,797,061 (GRCm39) |
F814L |
probably damaging |
Het |
Axdnd1 |
G |
A |
1: 156,219,516 (GRCm39) |
A193V |
|
Het |
Bicra |
T |
A |
7: 15,721,481 (GRCm39) |
I679L |
probably benign |
Het |
Ccm2l |
G |
A |
2: 152,909,756 (GRCm39) |
R36H |
probably damaging |
Het |
Cd160 |
T |
A |
3: 96,713,102 (GRCm39) |
D54V |
probably damaging |
Het |
Cela3a |
C |
T |
4: 137,133,222 (GRCm39) |
G50D |
probably benign |
Het |
Cep152 |
T |
A |
2: 125,421,770 (GRCm39) |
R987* |
probably null |
Het |
Cnnm2 |
T |
C |
19: 46,845,362 (GRCm39) |
V618A |
probably benign |
Het |
Crim1 |
G |
A |
17: 78,653,409 (GRCm39) |
R593Q |
possibly damaging |
Het |
Ctsc |
A |
G |
7: 87,959,024 (GRCm39) |
S435G |
probably benign |
Het |
Dcbld1 |
G |
T |
10: 52,195,958 (GRCm39) |
A460S |
probably benign |
Het |
Dcbld2 |
A |
G |
16: 58,276,715 (GRCm39) |
E502G |
probably benign |
Het |
Dhx30 |
A |
T |
9: 109,913,513 (GRCm39) |
L1207* |
probably null |
Het |
Dlx2 |
A |
T |
2: 71,376,716 (GRCm39) |
S7R |
possibly damaging |
Het |
Dmwd |
T |
A |
7: 18,814,973 (GRCm39) |
I541N |
probably damaging |
Het |
Dmxl1 |
T |
G |
18: 49,997,575 (GRCm39) |
L588V |
possibly damaging |
Het |
Dmxl1 |
C |
T |
18: 50,026,741 (GRCm39) |
P1950S |
probably damaging |
Het |
Dnhd1 |
T |
A |
7: 105,358,528 (GRCm39) |
L3339* |
probably null |
Het |
Elovl1 |
C |
A |
4: 118,288,709 (GRCm39) |
P160Q |
probably damaging |
Het |
Epg5 |
T |
A |
18: 78,022,434 (GRCm39) |
L1059Q |
probably damaging |
Het |
Fam149b |
C |
T |
14: 20,402,777 (GRCm39) |
S53F |
probably benign |
Het |
Fat1 |
T |
A |
8: 45,495,331 (GRCm39) |
C4140S |
probably damaging |
Het |
Gria2 |
C |
T |
3: 80,615,200 (GRCm39) |
V427I |
probably damaging |
Het |
H2al2a |
C |
A |
2: 18,001,537 (GRCm39) |
A50S |
probably damaging |
Het |
Hspbp1 |
T |
C |
7: 4,684,858 (GRCm39) |
M132V |
possibly damaging |
Het |
Igsf9 |
C |
T |
1: 172,312,033 (GRCm39) |
|
probably benign |
Het |
Jup |
C |
T |
11: 100,270,391 (GRCm39) |
C372Y |
probably damaging |
Het |
Katnb1 |
G |
A |
8: 95,822,987 (GRCm39) |
R394Q |
probably damaging |
Het |
Kif1b |
A |
T |
4: 149,332,273 (GRCm39) |
D553E |
probably damaging |
Het |
Kif3a |
T |
A |
11: 53,474,189 (GRCm39) |
L251Q |
probably damaging |
Het |
Klb |
T |
A |
5: 65,533,026 (GRCm39) |
I445K |
probably damaging |
Het |
Klhl29 |
T |
A |
12: 5,190,710 (GRCm39) |
|
probably null |
Het |
Lipf |
A |
G |
19: 33,942,273 (GRCm39) |
K68E |
probably benign |
Het |
Lnx2 |
T |
A |
5: 146,970,236 (GRCm39) |
I169L |
probably benign |
Het |
Lrba |
A |
C |
3: 86,522,388 (GRCm39) |
I2223L |
probably benign |
Het |
Lrp1 |
C |
T |
10: 127,391,896 (GRCm39) |
D2890N |
possibly damaging |
Het |
Lrp1b |
T |
C |
2: 41,325,640 (GRCm39) |
T926A |
|
Het |
Lrrc37a |
T |
A |
11: 103,391,490 (GRCm39) |
I1312F |
probably benign |
Het |
Lrrc71 |
T |
C |
3: 87,647,153 (GRCm39) |
H477R |
possibly damaging |
Het |
Lrrc8e |
T |
C |
8: 4,284,141 (GRCm39) |
V122A |
probably damaging |
Het |
Lsm14b |
T |
C |
2: 179,667,107 (GRCm39) |
|
probably null |
Het |
Magel2 |
A |
C |
7: 62,029,999 (GRCm39) |
I968L |
unknown |
Het |
Mapkbp1 |
T |
C |
2: 119,850,050 (GRCm39) |
V771A |
probably benign |
Het |
Mtmr4 |
T |
C |
11: 87,493,626 (GRCm39) |
S295P |
probably benign |
Het |
Nanos3 |
T |
A |
8: 84,902,815 (GRCm39) |
T116S |
probably benign |
Het |
Nectin3 |
T |
C |
16: 46,269,265 (GRCm39) |
D379G |
probably benign |
Het |
Nelfa |
T |
C |
5: 34,093,539 (GRCm39) |
H14R |
possibly damaging |
Het |
Nnt |
A |
G |
13: 119,502,967 (GRCm39) |
W593R |
unknown |
Het |
Nudt2 |
A |
T |
4: 41,477,575 (GRCm39) |
M19L |
probably benign |
Het |
Or4c115 |
T |
A |
2: 88,927,891 (GRCm39) |
K127* |
probably null |
Het |
Or52p1 |
A |
T |
7: 104,267,467 (GRCm39) |
T194S |
probably damaging |
Het |
Or5m13b |
T |
C |
2: 85,754,328 (GRCm39) |
S239P |
probably damaging |
Het |
Or5w22 |
T |
A |
2: 87,362,580 (GRCm39) |
C68S |
probably benign |
Het |
Or6f1 |
T |
A |
7: 85,970,369 (GRCm39) |
I264F |
possibly damaging |
Het |
Palld |
A |
T |
8: 61,969,735 (GRCm39) |
D1196E |
unknown |
Het |
Parl |
A |
G |
16: 20,116,909 (GRCm39) |
L96P |
probably damaging |
Het |
Pip4k2a |
T |
C |
2: 18,852,367 (GRCm39) |
D305G |
probably benign |
Het |
Pkhd1l1 |
T |
C |
15: 44,392,915 (GRCm39) |
V1750A |
possibly damaging |
Het |
Prkdc |
A |
G |
16: 15,493,229 (GRCm39) |
E712G |
probably null |
Het |
Rasgrf2 |
T |
C |
13: 92,158,225 (GRCm39) |
E532G |
possibly damaging |
Het |
Rbp3 |
T |
A |
14: 33,677,792 (GRCm39) |
L580Q |
probably damaging |
Het |
Ribc2 |
G |
T |
15: 85,016,337 (GRCm39) |
|
probably benign |
Het |
Rmnd5b |
T |
C |
11: 51,515,322 (GRCm39) |
S315G |
probably benign |
Het |
Rp1l1 |
T |
A |
14: 64,259,445 (GRCm39) |
V29E |
probably damaging |
Het |
Sclt1 |
T |
C |
3: 41,681,541 (GRCm39) |
T93A |
probably benign |
Het |
Shroom1 |
T |
A |
11: 53,355,994 (GRCm39) |
L348H |
probably damaging |
Het |
Slc13a1 |
T |
C |
6: 24,090,785 (GRCm39) |
K545E |
probably benign |
Het |
Slc20a2 |
C |
T |
8: 23,030,396 (GRCm39) |
P151S |
probably damaging |
Het |
Slc22a4 |
T |
C |
11: 53,879,718 (GRCm39) |
Y447C |
probably damaging |
Het |
Slu7 |
C |
A |
11: 43,333,480 (GRCm39) |
Q367K |
probably benign |
Het |
Spen |
T |
C |
4: 141,201,889 (GRCm39) |
N2246S |
possibly damaging |
Het |
Tac4 |
T |
G |
11: 95,156,045 (GRCm39) |
I42S |
possibly damaging |
Het |
Tmem87a |
A |
G |
2: 120,190,541 (GRCm39) |
V530A |
|
Het |
Vmn1r230 |
C |
T |
17: 21,067,321 (GRCm39) |
T170I |
possibly damaging |
Het |
Vps29 |
A |
G |
5: 122,498,212 (GRCm39) |
D51G |
probably benign |
Het |
Washc2 |
T |
C |
6: 116,231,399 (GRCm39) |
L874P |
probably damaging |
Het |
Wdr5b |
T |
C |
16: 35,861,926 (GRCm39) |
L15P |
probably benign |
Het |
Zscan20 |
T |
A |
4: 128,479,847 (GRCm39) |
Q881H |
probably damaging |
Het |
Zscan20 |
T |
G |
4: 128,479,848 (GRCm39) |
Q881P |
probably damaging |
Het |
|
Other mutations in Tnrc6c |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00839:Tnrc6c
|
APN |
11 |
117,605,011 (GRCm39) |
missense |
possibly damaging |
0.91 |
IGL01013:Tnrc6c
|
APN |
11 |
117,612,855 (GRCm39) |
missense |
probably benign |
0.44 |
IGL01092:Tnrc6c
|
APN |
11 |
117,612,811 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01383:Tnrc6c
|
APN |
11 |
117,605,083 (GRCm39) |
missense |
probably benign |
0.37 |
IGL01395:Tnrc6c
|
APN |
11 |
117,613,939 (GRCm39) |
missense |
probably benign |
0.08 |
IGL01726:Tnrc6c
|
APN |
11 |
117,640,161 (GRCm39) |
splice site |
probably benign |
|
IGL01869:Tnrc6c
|
APN |
11 |
117,646,274 (GRCm39) |
missense |
possibly damaging |
0.65 |
IGL02108:Tnrc6c
|
APN |
11 |
117,612,025 (GRCm39) |
missense |
probably benign |
0.29 |
IGL02457:Tnrc6c
|
APN |
11 |
117,613,803 (GRCm39) |
missense |
probably benign |
0.28 |
IGL02612:Tnrc6c
|
APN |
11 |
117,633,826 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL02748:Tnrc6c
|
APN |
11 |
117,622,996 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03160:Tnrc6c
|
APN |
11 |
117,640,651 (GRCm39) |
splice site |
probably benign |
|
rodion
|
UTSW |
11 |
117,629,176 (GRCm39) |
critical splice donor site |
probably null |
|
F5770:Tnrc6c
|
UTSW |
11 |
117,614,152 (GRCm39) |
missense |
probably damaging |
1.00 |
K3955:Tnrc6c
|
UTSW |
11 |
117,651,564 (GRCm39) |
missense |
probably damaging |
0.99 |
R0015:Tnrc6c
|
UTSW |
11 |
117,612,284 (GRCm39) |
missense |
probably damaging |
0.98 |
R0143:Tnrc6c
|
UTSW |
11 |
117,643,811 (GRCm39) |
missense |
probably damaging |
1.00 |
R0277:Tnrc6c
|
UTSW |
11 |
117,630,707 (GRCm39) |
missense |
probably damaging |
1.00 |
R0323:Tnrc6c
|
UTSW |
11 |
117,630,707 (GRCm39) |
missense |
probably damaging |
1.00 |
R0464:Tnrc6c
|
UTSW |
11 |
117,651,375 (GRCm39) |
missense |
probably damaging |
1.00 |
R0699:Tnrc6c
|
UTSW |
11 |
117,613,447 (GRCm39) |
missense |
probably benign |
0.02 |
R1015:Tnrc6c
|
UTSW |
11 |
117,612,748 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1201:Tnrc6c
|
UTSW |
11 |
117,612,500 (GRCm39) |
missense |
probably damaging |
0.96 |
R1297:Tnrc6c
|
UTSW |
11 |
117,624,529 (GRCm39) |
missense |
possibly damaging |
0.52 |
R1560:Tnrc6c
|
UTSW |
11 |
117,650,463 (GRCm39) |
missense |
probably damaging |
1.00 |
R1596:Tnrc6c
|
UTSW |
11 |
117,648,867 (GRCm39) |
missense |
probably damaging |
1.00 |
R1758:Tnrc6c
|
UTSW |
11 |
117,651,556 (GRCm39) |
missense |
probably benign |
0.09 |
R1892:Tnrc6c
|
UTSW |
11 |
117,605,188 (GRCm39) |
missense |
probably benign |
|
R1901:Tnrc6c
|
UTSW |
11 |
117,613,831 (GRCm39) |
missense |
probably damaging |
0.98 |
R1935:Tnrc6c
|
UTSW |
11 |
117,646,849 (GRCm39) |
missense |
possibly damaging |
0.91 |
R1936:Tnrc6c
|
UTSW |
11 |
117,646,849 (GRCm39) |
missense |
possibly damaging |
0.91 |
R1937:Tnrc6c
|
UTSW |
11 |
117,646,849 (GRCm39) |
missense |
possibly damaging |
0.91 |
R1940:Tnrc6c
|
UTSW |
11 |
117,646,849 (GRCm39) |
missense |
possibly damaging |
0.91 |
R3622:Tnrc6c
|
UTSW |
11 |
117,640,451 (GRCm39) |
missense |
probably damaging |
1.00 |
R3711:Tnrc6c
|
UTSW |
11 |
117,613,950 (GRCm39) |
missense |
probably benign |
0.00 |
R3725:Tnrc6c
|
UTSW |
11 |
117,614,355 (GRCm39) |
missense |
probably damaging |
0.96 |
R3775:Tnrc6c
|
UTSW |
11 |
117,614,355 (GRCm39) |
missense |
probably damaging |
0.96 |
R3776:Tnrc6c
|
UTSW |
11 |
117,614,355 (GRCm39) |
missense |
probably damaging |
0.96 |
R3836:Tnrc6c
|
UTSW |
11 |
117,614,055 (GRCm39) |
missense |
probably benign |
0.20 |
R3844:Tnrc6c
|
UTSW |
11 |
117,646,309 (GRCm39) |
missense |
probably damaging |
1.00 |
R3852:Tnrc6c
|
UTSW |
11 |
117,614,355 (GRCm39) |
missense |
probably damaging |
0.96 |
R3928:Tnrc6c
|
UTSW |
11 |
117,614,355 (GRCm39) |
missense |
probably damaging |
0.96 |
R3929:Tnrc6c
|
UTSW |
11 |
117,614,355 (GRCm39) |
missense |
probably damaging |
0.96 |
R3937:Tnrc6c
|
UTSW |
11 |
117,614,355 (GRCm39) |
missense |
probably damaging |
0.96 |
R3943:Tnrc6c
|
UTSW |
11 |
117,614,355 (GRCm39) |
missense |
probably damaging |
0.96 |
R4501:Tnrc6c
|
UTSW |
11 |
117,613,324 (GRCm39) |
missense |
probably damaging |
1.00 |
R4510:Tnrc6c
|
UTSW |
11 |
117,633,784 (GRCm39) |
missense |
possibly damaging |
0.68 |
R4511:Tnrc6c
|
UTSW |
11 |
117,633,784 (GRCm39) |
missense |
possibly damaging |
0.68 |
R4654:Tnrc6c
|
UTSW |
11 |
117,611,797 (GRCm39) |
missense |
probably benign |
|
R4765:Tnrc6c
|
UTSW |
11 |
117,633,753 (GRCm39) |
missense |
probably benign |
0.09 |
R4824:Tnrc6c
|
UTSW |
11 |
117,613,731 (GRCm39) |
missense |
probably damaging |
0.98 |
R5004:Tnrc6c
|
UTSW |
11 |
117,611,872 (GRCm39) |
missense |
probably benign |
0.44 |
R5094:Tnrc6c
|
UTSW |
11 |
117,611,872 (GRCm39) |
missense |
probably benign |
0.00 |
R5130:Tnrc6c
|
UTSW |
11 |
117,629,176 (GRCm39) |
critical splice donor site |
probably null |
|
R5234:Tnrc6c
|
UTSW |
11 |
117,651,555 (GRCm39) |
missense |
probably benign |
0.42 |
R5235:Tnrc6c
|
UTSW |
11 |
117,651,555 (GRCm39) |
missense |
probably benign |
0.42 |
R5345:Tnrc6c
|
UTSW |
11 |
117,614,113 (GRCm39) |
missense |
possibly damaging |
0.80 |
R5359:Tnrc6c
|
UTSW |
11 |
117,649,731 (GRCm39) |
splice site |
silent |
|
R5428:Tnrc6c
|
UTSW |
11 |
117,591,588 (GRCm39) |
start codon destroyed |
probably null |
|
R5548:Tnrc6c
|
UTSW |
11 |
117,651,669 (GRCm39) |
missense |
possibly damaging |
0.96 |
R5587:Tnrc6c
|
UTSW |
11 |
117,640,097 (GRCm39) |
nonsense |
probably null |
|
R5875:Tnrc6c
|
UTSW |
11 |
117,650,534 (GRCm39) |
missense |
probably damaging |
0.99 |
R5947:Tnrc6c
|
UTSW |
11 |
117,613,345 (GRCm39) |
missense |
probably damaging |
1.00 |
R6135:Tnrc6c
|
UTSW |
11 |
117,626,831 (GRCm39) |
missense |
probably damaging |
0.97 |
R6354:Tnrc6c
|
UTSW |
11 |
117,640,440 (GRCm39) |
missense |
possibly damaging |
0.90 |
R6389:Tnrc6c
|
UTSW |
11 |
117,613,567 (GRCm39) |
missense |
probably damaging |
0.99 |
R7027:Tnrc6c
|
UTSW |
11 |
117,624,444 (GRCm39) |
missense |
probably damaging |
1.00 |
R7048:Tnrc6c
|
UTSW |
11 |
117,612,800 (GRCm39) |
missense |
probably benign |
0.41 |
R7098:Tnrc6c
|
UTSW |
11 |
117,604,952 (GRCm39) |
missense |
probably benign |
0.03 |
R7315:Tnrc6c
|
UTSW |
11 |
117,614,354 (GRCm39) |
missense |
probably benign |
0.11 |
R7378:Tnrc6c
|
UTSW |
11 |
117,632,606 (GRCm39) |
missense |
probably benign |
0.03 |
R7386:Tnrc6c
|
UTSW |
11 |
117,612,780 (GRCm39) |
missense |
probably benign |
|
R7515:Tnrc6c
|
UTSW |
11 |
117,632,507 (GRCm39) |
missense |
probably benign |
0.03 |
R7665:Tnrc6c
|
UTSW |
11 |
117,611,777 (GRCm39) |
missense |
possibly damaging |
0.46 |
R7755:Tnrc6c
|
UTSW |
11 |
117,648,912 (GRCm39) |
missense |
probably benign |
0.00 |
R8679:Tnrc6c
|
UTSW |
11 |
117,604,961 (GRCm39) |
missense |
probably benign |
|
R8824:Tnrc6c
|
UTSW |
11 |
117,630,680 (GRCm39) |
splice site |
probably benign |
|
R9261:Tnrc6c
|
UTSW |
11 |
117,605,105 (GRCm39) |
missense |
probably damaging |
0.99 |
R9283:Tnrc6c
|
UTSW |
11 |
117,591,630 (GRCm39) |
missense |
unknown |
|
R9342:Tnrc6c
|
UTSW |
11 |
117,630,720 (GRCm39) |
missense |
probably benign |
0.01 |
R9633:Tnrc6c
|
UTSW |
11 |
117,638,009 (GRCm39) |
missense |
probably damaging |
1.00 |
R9761:Tnrc6c
|
UTSW |
11 |
117,623,136 (GRCm39) |
missense |
probably benign |
|
V7580:Tnrc6c
|
UTSW |
11 |
117,614,152 (GRCm39) |
missense |
probably damaging |
1.00 |
V7581:Tnrc6c
|
UTSW |
11 |
117,614,152 (GRCm39) |
missense |
probably damaging |
1.00 |
V7582:Tnrc6c
|
UTSW |
11 |
117,614,152 (GRCm39) |
missense |
probably damaging |
1.00 |
V7583:Tnrc6c
|
UTSW |
11 |
117,614,152 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Tnrc6c
|
UTSW |
11 |
117,623,003 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
Predicted Primers |
PCR Primer
(F):5'- GACATCATGCAGACGTCCTC -3'
(R):5'- CTTTCCACACAGGGAGTCCAAC -3'
Sequencing Primer
(F):5'- CGCACTTCAGGTCTGGTTCATG -3'
(R):5'- CACAGGGAGTCCAACCAGAG -3'
|
Posted On |
2021-10-11 |