Mutagenetix > Incidental Mutation

Incidental Mutation 'R4991:Zfp740'

386224

Institutional Source

Beutler Lab

Gene Symbol

Zfp740

Ensembl Gene

ENSMUSG00000046897

Gene Name

zinc finger protein 740

Synonyms

1110034O07Rik

MMRRC Submission

042585-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.199) question?

Stock #

R4991 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

102112080-102124045 bp(+) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

G to T at 102116714 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000155394 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000118729] [ENSMUST00000119168] [ENSMUST00000119800] [ENSMUST00000121206] [ENSMUST00000133986] [ENSMUST00000139960] [ENSMUST00000141465] [ENSMUST00000229886] [ENSMUST00000229345] [ENSMUST00000229252] [ENSMUST00000229770] [ENSMUST00000229043] [ENSMUST00000230656] [ENSMUST00000229514] [ENSMUST00000230867] [ENSMUST00000231030] [ENSMUST00000230687]

AlphaFold

Q6NZQ6

Predicted Effect

probably damaging
Transcript: ENSMUST00000118729
AA Change: R31L

PolyPhen 2 Score 0.976 (Sensitivity: 0.76; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000112985
Gene: ENSMUSG00000046897
AA Change: R31L

Domain	Start	End	E-Value	Type
low complexity region	53	62	N/A	INTRINSIC
ZnF_C2H2	76	98	3.07e-1	SMART
ZnF_C2H2	104	126	1.69e-3	SMART
ZnF_C2H2	132	152	4.99e1	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000119168
AA Change: R43L

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)

Predicted Effect

probably damaging
Transcript: ENSMUST00000119800
AA Change: R43L

PolyPhen 2 Score 0.990 (Sensitivity: 0.72; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000113770
Gene: ENSMUSG00000046897
AA Change: R43L

Domain	Start	End	E-Value	Type
low complexity region	65	74	N/A	INTRINSIC
ZnF_C2H2	88	110	3.07e-1	SMART
ZnF_C2H2	116	138	1.69e-3	SMART
ZnF_C2H2	144	164	4.99e1	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000119830

SMART Domains

Protein: ENSMUSP00000113281
Gene: ENSMUSG00000046897

Domain	Start	End	E-Value	Type
ZnF_C2H2	25	47	3.07e-1	SMART
ZnF_C2H2	53	75	1.69e-3	SMART
ZnF_C2H2	81	101	4.99e1	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000121206

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000123528

Predicted Effect

probably damaging
Transcript: ENSMUST00000133986
AA Change: R43L

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000122429
Gene: ENSMUSG00000046897
AA Change: R43L

Domain	Start	End	E-Value	Type
low complexity region	65	74	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000139960
AA Change: R43L

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000117024
Gene: ENSMUSG00000046897
AA Change: R43L

Domain	Start	End	E-Value	Type
low complexity region	65	74	N/A	INTRINSIC
Blast:ZnF_C2H2	88	107	9e-7	BLAST

Predicted Effect

probably damaging
Transcript: ENSMUST00000141465
AA Change: R68L

PolyPhen 2 Score 0.986 (Sensitivity: 0.74; Specificity: 0.96)

Predicted Effect

possibly damaging
Transcript: ENSMUST00000229886
AA Change: R31L

PolyPhen 2 Score 0.663 (Sensitivity: 0.86; Specificity: 0.91)

Predicted Effect

probably null
Transcript: ENSMUST00000229345

Predicted Effect

probably null
Transcript: ENSMUST00000229252

Predicted Effect

probably null
Transcript: ENSMUST00000229770

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000230328

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000230008

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000230644

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000230665

Predicted Effect

probably null
Transcript: ENSMUST00000229043

Predicted Effect

probably null
Transcript: ENSMUST00000230656

Predicted Effect

probably null
Transcript: ENSMUST00000229514

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000230600

Predicted Effect

possibly damaging
Transcript: ENSMUST00000230867
AA Change: R6L

PolyPhen 2 Score 0.663 (Sensitivity: 0.86; Specificity: 0.91)

Predicted Effect

probably null
Transcript: ENSMUST00000231030

Predicted Effect

probably null
Transcript: ENSMUST00000230687

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000230895

Meta Mutation Damage Score

0.0751

Coding Region Coverage

1x: 99.0%
3x: 98.2%
10x: 95.7%
20x: 90.0%

Validation Efficiency

95% (73/77)

Allele List at MGI

Other mutations in this stock

Total: 62 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adcy4	G	T	14: 56,010,922 (GRCm39)	T665K	probably benign	Het
Adgrf3	C	T	5: 30,404,146 (GRCm39)	V369M	probably benign	Het
Als2	T	C	1: 59,246,927 (GRCm39)	K571E	probably benign	Het
Amer3	A	C	1: 34,627,822 (GRCm39)	D687A	probably benign	Het
Asb14	T	C	14: 26,637,015 (GRCm39)	S586P	probably damaging	Het
Catspere2	A	C	1: 177,925,987 (GRCm39)	I218L	probably benign	Het
Chmp4b	A	G	2: 154,534,545 (GRCm39)	E187G	probably benign	Het
Cox6b2	T	C	7: 4,755,160 (GRCm39)	D38G	probably damaging	Het
Cpm	G	A	10: 117,504,008 (GRCm39)	C138Y	probably damaging	Het
Csmd3	G	T	15: 47,864,874 (GRCm39)	P785Q	probably damaging	Het
Cstf1	A	G	2: 172,219,720 (GRCm39)	Y277C	probably damaging	Het
Cstf2t	T	A	19: 31,061,983 (GRCm39)	N506K	probably damaging	Het
Dmpk	C	G	7: 18,821,944 (GRCm39)	L301V	probably benign	Het
Ebf2	A	T	14: 67,627,106 (GRCm39)	T265S	possibly damaging	Het
Elmo1	T	C	13: 20,526,689 (GRCm39)	F413S	probably damaging	Het
Fbp1	C	T	13: 63,012,888 (GRCm39)	V102I	probably benign	Het
Gm19684	A	G	17: 36,438,364 (GRCm39)		probably benign	Het
Gm29106	T	C	1: 118,106,121 (GRCm39)	M37T	probably benign	Het
Grem2	A	G	1: 174,664,379 (GRCm39)	C157R	probably damaging	Het
Hdac5	T	A	11: 102,096,450 (GRCm39)	E252D	probably damaging	Het
Ifitm3	A	T	7: 140,590,372 (GRCm39)	F63I	probably damaging	Het
Igkv4-80	A	C	6: 68,993,649 (GRCm39)	S81A	probably benign	Het
Irx4	G	T	13: 73,413,626 (GRCm39)	R32L	probably benign	Het
Itgb1bp1	C	T	12: 21,324,849 (GRCm39)	G69D	probably damaging	Het
Kcnh3	A	G	15: 99,130,637 (GRCm39)	D418G	probably benign	Het
Kif1a	T	C	1: 93,006,530 (GRCm39)	T46A	probably benign	Het
Klk1b26	T	A	7: 43,665,673 (GRCm39)		probably null	Het
Lca5l	T	C	16: 95,960,932 (GRCm39)	E510G	possibly damaging	Het
Lrriq1	A	G	10: 103,036,420 (GRCm39)	I911T	probably damaging	Het
Mios	T	G	6: 8,215,847 (GRCm39)	S348A	probably benign	Het
Mog	T	C	17: 37,328,381 (GRCm39)		probably null	Het
Mtmr7	A	G	8: 41,007,386 (GRCm39)	S516P	probably damaging	Het
Nat8f4	T	C	6: 85,878,122 (GRCm39)	K134E	probably benign	Het
Nbeal2	C	T	9: 110,467,835 (GRCm39)	C451Y	probably damaging	Het
Nkx2-1	T	C	12: 56,581,724 (GRCm39)	Y41C	possibly damaging	Het
Nmnat1	G	A	4: 149,553,584 (GRCm39)	T176M	possibly damaging	Het
Nrxn3	T	A	12: 89,227,244 (GRCm39)	I293N	probably damaging	Het
Or5af2	T	C	11: 58,708,544 (GRCm39)	S237P	probably damaging	Het
Or5b97	T	G	19: 12,878,815 (GRCm39)	T110P	probably damaging	Het
Or5m8	A	G	2: 85,822,631 (GRCm39)	M157V	probably damaging	Het
Osgin1	A	G	8: 120,172,028 (GRCm39)	E274G	probably damaging	Het
Otof	G	A	5: 30,551,525 (GRCm39)	R343W	probably damaging	Het
Pcdha9	A	T	18: 37,131,398 (GRCm39)	I156F	probably damaging	Het
Pcsk4	A	G	10: 80,161,215 (GRCm39)	I233T	possibly damaging	Het
Pira12	T	G	7: 3,898,571 (GRCm39)	Q292H	probably benign	Het
Samd4	A	T	14: 47,311,467 (GRCm39)	S262C	probably damaging	Het
Snap91	T	C	9: 86,672,207 (GRCm39)		probably null	Het
Spata31d1a	T	C	13: 59,850,965 (GRCm39)	N388D	probably benign	Het
St3gal4	A	G	9: 34,964,432 (GRCm39)	V190A	possibly damaging	Het
Sv2b	T	C	7: 74,767,470 (GRCm39)	N642S	possibly damaging	Het
Svil	T	A	18: 5,056,810 (GRCm39)	I561K	probably benign	Het
Tmem201	A	T	4: 149,812,612 (GRCm39)	Y235N	possibly damaging	Het
Tpx2	T	C	2: 152,711,644 (GRCm39)	S60P	probably benign	Het
Trpa1	T	C	1: 14,980,970 (GRCm39)	Y144C	probably benign	Het
U90926	G	A	5: 92,357,879 (GRCm39)	P91S	probably benign	Het
Utp20	G	T	10: 88,582,796 (GRCm39)	H2780Q	probably benign	Het
Vmn1r215	T	G	13: 23,260,697 (GRCm39)	F246V	probably damaging	Het
Vmn2r72	A	G	7: 85,400,338 (GRCm39)	L237S	probably damaging	Het
Washc5	A	G	15: 59,215,929 (GRCm39)	S817P	probably damaging	Het
Zbtb24	A	G	10: 41,332,614 (GRCm39)		probably null	Het
Zfp212	G	A	6: 47,903,796 (GRCm39)	R127H	probably damaging	Het
Zfp268	C	A	4: 145,348,904 (GRCm39)	Q114K	probably benign	Het

Other mutations in Zfp740

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02165:Zfp740	APN	15	102,121,109 (GRCm39)	missense	possibly damaging	0.66
R0432:Zfp740	UTSW	15	102,121,094 (GRCm39)	missense	possibly damaging	0.66
R0659:Zfp740	UTSW	15	102,121,094 (GRCm39)	missense	possibly damaging	0.66
R0661:Zfp740	UTSW	15	102,121,094 (GRCm39)	missense	possibly damaging	0.66
R1666:Zfp740	UTSW	15	102,116,753 (GRCm39)	missense	probably damaging	1.00
R1830:Zfp740	UTSW	15	102,116,336 (GRCm39)	missense	probably damaging	1.00
R3983:Zfp740	UTSW	15	102,116,678 (GRCm39)	missense	probably benign	0.06
R4686:Zfp740	UTSW	15	102,117,184 (GRCm39)	unclassified	probably benign
R5170:Zfp740	UTSW	15	102,117,640 (GRCm39)	missense	probably damaging	1.00
R5213:Zfp740	UTSW	15	102,121,082 (GRCm39)	missense	possibly damaging	0.68
R5782:Zfp740	UTSW	15	102,116,801 (GRCm39)	unclassified	probably benign
R6088:Zfp740	UTSW	15	102,117,243 (GRCm39)	missense	probably damaging	1.00
R6848:Zfp740	UTSW	15	102,117,243 (GRCm39)	missense	probably benign	0.24
R8526:Zfp740	UTSW	15	102,116,726 (GRCm39)	missense	probably null	1.00

Predicted Primers

PCR Primer
(F):5'- GCAAGGAGTACGGGTATCTG -3'
(R):5'- TGTTCAGCAAGAGTGGACGG -3'

Sequencing Primer
(F):5'- AAAGTTCTTGTGGTACCTGCAGAC -3'
(R):5'- GTGGACGGCAACTGTCAG -3'

Posted On

2016-05-10