Mutagenetix > Incidental Mutations

Incidental Mutation 'R6427:Nlrp4e'

518359

Institutional Source

Beutler Lab

Gene Symbol

Nlrp4e

Ensembl Gene

ENSMUSG00000045693

Gene Name

NLR family, pyrin domain containing 4E

Synonyms

4930406H16Rik, Nalp4e, Nalp-epsilon

MMRRC Submission

Accession Numbers

Is this an essential gene?

Non essential (E-score: 0.000) question?

Stock #

R6427 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

23301192-23362277 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 23320633 bp

Zygosity

Heterozygous

Amino Acid Change

Serine to Threonine at position 182 (S182T)

Ref Sequence

ENSEMBL: ENSMUSP00000075794 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000076470]

Predicted Effect

possibly damaging
Transcript: ENSMUST00000076470
AA Change: S182T

PolyPhen 2 Score 0.479 (Sensitivity: 0.89; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000075794
Gene: ENSMUSG00000045693
AA Change: S182T

Domain	Start	End	E-Value	Type
PYRIN	6	89	1.43e-35	SMART
Pfam:NACHT	148	317	1.3e-39	PFAM
LRR	689	716	1.87e1	SMART
LRR	718	745	7.74e0	SMART
LRR	746	772	2.5e1	SMART
LRR	774	801	2.67e1	SMART
LRR	802	829	6.48e-1	SMART
LRR	831	858	2.03e0	SMART
LRR	859	886	2.88e-6	SMART
LRR	888	915	9.41e0	SMART
LRR	916	943	1.02e2	SMART

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 97.8%
20x: 93.1%

Validation Efficiency

93% (39/42)

Allele List at MGI

Other mutations in this stock

Total: 40 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abat	C	T	16: 8,602,436		probably benign	Het
Ankmy2	A	G	12: 36,187,711	S270G	possibly damaging	Het
Anxa2	T	A	9: 69,476,149		probably null	Het
Arid1a	G	T	4: 133,681,524	P1891T	unknown	Het
Atn1	G	T	6: 124,746,176		probably benign	Het
Atp8b3	A	T	10: 80,520,323		probably null	Het
Cab39l	A	C	14: 59,506,270	K94N	possibly damaging	Het
Cacna2d2	G	T	9: 107,515,442	M528I	possibly damaging	Het
Ccnc	T	A	4: 21,747,578		probably null	Het
Clasp2	C	T	9: 113,892,444	T774I	probably damaging	Het
Cngb1	C	T	8: 95,297,759		probably benign	Het
Cpt1a	T	A	19: 3,362,156	F209L	probably damaging	Het
Cyp2j7	C	A	4: 96,227,667	D181Y	probably damaging	Het
Daam2	C	T	17: 49,469,376	E828K	probably damaging	Het
Ddr1	C	A	17: 35,687,222	R477L	probably benign	Het
Ech1	A	G	7: 28,825,885	T22A	probably benign	Het
Fbln5	T	C	12: 101,761,822	D294G	possibly damaging	Het
Fkbp15	T	C	4: 62,323,202	I569V	probably benign	Het
Hmcn1	G	T	1: 150,697,476	R2141S	possibly damaging	Het
Kat6b	T	C	14: 21,517,412	S180P	probably benign	Het
Lepr	G	A	4: 101,774,257	E655K	possibly damaging	Het
Mro	T	A	18: 73,872,033	L69Q	probably damaging	Het
Nipbl	A	T	15: 8,351,565	L581H	probably benign	Het
Nkiras2	C	T	11: 100,625,035	R63W	probably damaging	Het
Olfr548-ps1	A	T	7: 102,542,688	I251F	probably benign	Het
Otud4	T	C	8: 79,668,497	S553P	probably benign	Het
Pcdha4	T	C	18: 36,953,733	I323T	probably benign	Het
Polr1b	G	T	2: 129,123,261	A756S	probably damaging	Het
Prex2	A	T	1: 11,182,031	Y1100F	probably damaging	Het
Rnf219	T	C	14: 104,480,226	K237R	possibly damaging	Het
Serpinb6a	A	T	13: 33,918,259	S328T	probably damaging	Het
Srsf11	C	T	3: 158,023,344		probably benign	Het
Stxbp5	T	C	10: 9,899,254	T52A	probably damaging	Het
Taf3	A	T	2: 9,951,353	F515I	probably damaging	Het
Unc13b	A	G	4: 43,176,966		probably benign	Het
Vmn2r106	C	T	17: 20,268,463	C558Y	probably damaging	Het
Vps51	T	C	19: 6,070,917	Y322C	possibly damaging	Het
Wdr66	T	C	5: 123,326,533	L1268P	probably damaging	Het
Zfp735	G	A	11: 73,690,314	C59Y	possibly damaging	Het
Zfp759	A	G	13: 67,139,098		probably null	Het

Other mutations in Nlrp4e

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00704:Nlrp4e	APN	7	23343140	missense	probably damaging	1.00
IGL00833:Nlrp4e	APN	7	23340471	missense	probably benign	0.00
IGL01017:Nlrp4e	APN	7	23321667	missense	possibly damaging	0.93
IGL01025:Nlrp4e	APN	7	23353161	splice site	probably benign
IGL01815:Nlrp4e	APN	7	23321438	missense	probably benign	0.02
IGL01924:Nlrp4e	APN	7	23320830	nonsense	probably null
IGL02245:Nlrp4e	APN	7	23320875	missense	probably damaging	1.00
IGL02745:Nlrp4e	APN	7	23321291	missense	probably damaging	1.00
IGL02746:Nlrp4e	APN	7	23321839	missense	probably benign	0.00
IGL02987:Nlrp4e	APN	7	23301433	missense	probably damaging	1.00
IGL02997:Nlrp4e	APN	7	23301374	missense	probably benign	0.04
IGL03193:Nlrp4e	APN	7	23320826	missense	probably damaging	1.00
IGL03304:Nlrp4e	APN	7	23353343	critical splice donor site	probably null
IGL03352:Nlrp4e	APN	7	23320826	missense	probably damaging	1.00
R0389:Nlrp4e	UTSW	7	23355203	missense	probably damaging	0.98
R1028:Nlrp4e	UTSW	7	23321744	missense	probably damaging	1.00
R1163:Nlrp4e	UTSW	7	23320972	missense	probably benign	0.03
R1269:Nlrp4e	UTSW	7	23353338	missense	possibly damaging	0.95
R1400:Nlrp4e	UTSW	7	23321660	missense	possibly damaging	0.93
R1497:Nlrp4e	UTSW	7	23320372	missense	probably benign	0.00
R1518:Nlrp4e	UTSW	7	23321843	missense	probably benign	0.33
R1716:Nlrp4e	UTSW	7	23321033	missense	possibly damaging	0.56
R1727:Nlrp4e	UTSW	7	23320995	missense	probably benign	0.01
R1998:Nlrp4e	UTSW	7	23321246	missense	probably benign	0.00
R2177:Nlrp4e	UTSW	7	23355261	missense	probably benign	0.00
R3724:Nlrp4e	UTSW	7	23321377	missense	probably benign	0.28
R3767:Nlrp4e	UTSW	7	23340563	missense	probably damaging	1.00
R3795:Nlrp4e	UTSW	7	23320803	missense	probably benign	0.35
R4387:Nlrp4e	UTSW	7	23301477	missense	probably benign	0.00
R4387:Nlrp4e	UTSW	7	23321227	missense	probably benign	0.01
R4388:Nlrp4e	UTSW	7	23301477	missense	probably benign	0.00
R4388:Nlrp4e	UTSW	7	23321227	missense	probably benign	0.01
R4389:Nlrp4e	UTSW	7	23321227	missense	probably benign	0.01
R4403:Nlrp4e	UTSW	7	23321463	nonsense	probably null
R4444:Nlrp4e	UTSW	7	23321227	missense	probably benign	0.01
R4486:Nlrp4e	UTSW	7	23321227	missense	probably benign	0.01
R4547:Nlrp4e	UTSW	7	23336866	missense	probably benign	0.00
R4553:Nlrp4e	UTSW	7	23320979	missense	probably benign
R4666:Nlrp4e	UTSW	7	23336780	nonsense	probably null
R4721:Nlrp4e	UTSW	7	23321096	missense	possibly damaging	0.84
R4728:Nlrp4e	UTSW	7	23321564	missense	probably benign
R4758:Nlrp4e	UTSW	7	23320618	missense	probably benign	0.17
R4775:Nlrp4e	UTSW	7	23343100	missense	probably benign	0.14
R4830:Nlrp4e	UTSW	7	23336740	missense	probably benign	0.03
R4954:Nlrp4e	UTSW	7	23361893	nonsense	probably null
R5277:Nlrp4e	UTSW	7	23321438	missense	probably benign	0.02
R5352:Nlrp4e	UTSW	7	23353173	missense	probably benign	0.26
R5521:Nlrp4e	UTSW	7	23321765	missense	probably benign	0.00
R5528:Nlrp4e	UTSW	7	23336891	missense	probably benign	0.07
R5537:Nlrp4e	UTSW	7	23320489	missense	probably benign	0.00
R5584:Nlrp4e	UTSW	7	23321177	missense	probably benign
R5683:Nlrp4e	UTSW	7	23353272	missense	probably damaging	0.99
R6160:Nlrp4e	UTSW	7	23321306	missense	probably damaging	0.99
R6313:Nlrp4e	UTSW	7	23353172	missense	probably benign
R6647:Nlrp4e	UTSW	7	23321315	missense	probably benign	0.00
R6929:Nlrp4e	UTSW	7	23336731	critical splice acceptor site	probably null
R7307:Nlrp4e	UTSW	7	23321528	missense	probably benign	0.07
R7792:Nlrp4e	UTSW	7	23321757	missense	possibly damaging	0.60
R8169:Nlrp4e	UTSW	7	23320506	missense	probably benign	0.06
R8445:Nlrp4e	UTSW	7	23340540	missense	probably benign	0.00
R8487:Nlrp4e	UTSW	7	23321558	missense	probably benign	0.00
X0022:Nlrp4e	UTSW	7	23343119	missense	probably damaging	1.00
X0025:Nlrp4e	UTSW	7	23343178	missense	possibly damaging	0.91
X0026:Nlrp4e	UTSW	7	23355223	missense	possibly damaging	0.87

Predicted Primers

PCR Primer
(F):5'- CAAAGATCAAGATTCCCTTAAGCAG -3'
(R):5'- TGCAGTCATCACACAGCTCC -3'

Sequencing Primer
(F):5'- CAGAAATTTACCCAGGATGACTGTG -3'
(R):5'- AGCTCCGACTCCCATTCAG -3'

Posted On

2018-05-24