Mutagenetix > Incidental Mutation

Incidental Mutation 'R7445:Or6c5b'

577242

Institutional Source

Beutler Lab

Gene Symbol

Or6c5b

Ensembl Gene

ENSMUSG00000111732

Gene Name

olfactory receptor family 6 subfamily C member 5B

Synonyms

GA_x6K02T2PULF-11089673-11090600, MOR111-14_i, Olfr785, EG546488, MOR111-8P, Gm44444, Olfr785-ps1

MMRRC Submission

045521-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.116) question?

Stock #

R7445 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

129245237-129246175 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 129245754 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Valine at position 173 (D173V)

Ref Sequence

ENSEMBL: ENSMUSP00000145040 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000204402]

AlphaFold

A0A0N4SVC3

Predicted Effect

probably benign
Transcript: ENSMUST00000204402
AA Change: D173V

PolyPhen 2 Score 0.218 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000145040
Gene: ENSMUSG00000111732
AA Change: D173V

Domain	Start	End	E-Value	Type
Pfam:7tm_4	28	306	2.4e-49	PFAM
Pfam:7tm_1	39	288	4.1e-19	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.2%

Validation Efficiency

100% (67/67)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Apr 2010]

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
0610040J01Rik	T	A	5: 64,055,962 (GRCm39)	S233T	probably damaging	Het
1700034E13Rik	T	A	18: 52,793,553 (GRCm39)	C29S	probably damaging	Het
Acsbg3	G	A	17: 57,189,973 (GRCm39)	R333Q	possibly damaging	Het
Ank3	A	G	10: 69,827,954 (GRCm39)	T2208A		Het
Ap4s1	T	C	12: 51,785,424 (GRCm39)	L132P	probably damaging	Het
Ascl4	C	T	10: 85,764,364 (GRCm39)	R4C	probably benign	Het
Brd7	A	T	8: 89,088,336 (GRCm39)	Y18N	probably damaging	Het
Cacna2d3	A	G	14: 28,780,575 (GRCm39)	S648P	possibly damaging	Het
Camta1	C	T	4: 151,228,748 (GRCm39)	E695K	possibly damaging	Het
Ccdc28b	A	G	4: 129,516,400 (GRCm39)	F53L	probably benign	Het
Chaf1a	A	G	17: 56,369,170 (GRCm39)	D467G	possibly damaging	Het
Cnnm1	G	A	19: 43,429,260 (GRCm39)	R126H	possibly damaging	Het
Cog5	T	G	12: 31,969,671 (GRCm39)	S730R	possibly damaging	Het
Col11a1	A	T	3: 113,987,578 (GRCm39)	E1374D	unknown	Het
Csmd1	A	G	8: 16,208,268 (GRCm39)	I1229T	possibly damaging	Het
Degs1l	A	G	1: 180,882,577 (GRCm39)	N113S	possibly damaging	Het
Dnajc30	T	C	5: 135,093,232 (GRCm39)	L43P	probably damaging	Het
Eif3f	C	T	7: 108,533,865 (GRCm39)	T76M	unknown	Het
Ermap	G	A	4: 119,045,907 (GRCm39)	T42I	unknown	Het
Gpd1l	C	T	9: 114,749,742 (GRCm39)	G25S	probably damaging	Het
Heatr1	G	T	13: 12,445,919 (GRCm39)	W1632L	possibly damaging	Het
Ice1	T	C	13: 70,744,286 (GRCm39)	D29G		Het
Ipo8	T	C	6: 148,691,315 (GRCm39)	D685G	probably benign	Het
Klra10	T	C	6: 130,252,819 (GRCm39)	T152A	probably benign	Het
Lmntd1	T	A	6: 145,375,693 (GRCm39)	S82C	probably damaging	Het
Maip1	T	C	1: 57,446,190 (GRCm39)	S87P	possibly damaging	Het
Mapkapk2	A	G	1: 131,025,256 (GRCm39)	S3P	unknown	Het
Mei4	A	G	9: 81,772,292 (GRCm39)	Y35C	possibly damaging	Het
Ms4a14	T	G	19: 11,280,336 (GRCm39)	K741Q	probably benign	Het
Mtcl3	T	C	10: 29,072,999 (GRCm39)	S764P	possibly damaging	Het
Naip2	A	C	13: 100,298,290 (GRCm39)	I582S	probably benign	Het
Ncapg2	A	G	12: 116,382,888 (GRCm39)	I240V	possibly damaging	Het
Ncbp1	T	A	4: 46,149,914 (GRCm39)	M145K	probably damaging	Het
Nmur2	A	G	11: 55,923,766 (GRCm39)	F263L	probably damaging	Het
Ntrk2	A	G	13: 58,994,576 (GRCm39)	E164G	probably benign	Het
Or2ag1	A	G	7: 106,472,549 (GRCm39)	L301S	possibly damaging	Het
Or4c58	T	A	2: 89,674,616 (GRCm39)	T234S	probably damaging	Het
P3h2	T	A	16: 25,803,815 (GRCm39)	Y317F	probably damaging	Het
Pcmtd1	C	T	1: 7,190,644 (GRCm39)	R38C	probably damaging	Het
Pcyox1	T	C	6: 86,368,661 (GRCm39)	T286A	possibly damaging	Het
Pdxk	T	C	10: 78,283,801 (GRCm39)	D131G	probably benign	Het
Ppl	T	C	16: 4,906,932 (GRCm39)	D1121G	probably damaging	Het
Prkra	T	C	2: 76,463,942 (GRCm39)	D240G	probably benign	Het
Ptgs1	C	A	2: 36,135,222 (GRCm39)	N395K	probably benign	Het
Ptprq	A	T	10: 107,426,820 (GRCm39)	Y1572N	probably damaging	Het
Pyroxd1	A	T	6: 142,304,227 (GRCm39)	H326L	probably benign	Het
Rapgef5	A	G	12: 117,719,704 (GRCm39)	D778G	probably benign	Het
Rbm46	T	A	3: 82,771,517 (GRCm39)	E366V	probably damaging	Het
Rnd1	G	T	15: 98,568,550 (GRCm39)	H209Q	probably benign	Het
Rnf122	A	T	8: 31,608,528 (GRCm39)	D32V	possibly damaging	Het
Samd4b	G	A	7: 28,105,881 (GRCm39)	P446S	probably benign	Het
Slco1a5	C	A	6: 142,204,734 (GRCm39)	A187S	possibly damaging	Het
Smarca4	G	A	9: 21,597,543 (GRCm39)	V1436M	probably damaging	Het
Smok2a	G	A	17: 13,445,526 (GRCm39)	G368R	possibly damaging	Het
Smok3c	T	A	5: 138,062,757 (GRCm39)	H81Q	probably damaging	Het
Stk16	T	C	1: 75,190,296 (GRCm39)	V245A	probably damaging	Het
Svep1	A	T	4: 58,094,122 (GRCm39)	N1505K	possibly damaging	Het
Tigd4	G	A	3: 84,502,471 (GRCm39)	A463T	probably benign	Het
Tmem117	T	C	15: 94,612,799 (GRCm39)	F112L	probably benign	Het
Tmem72	A	G	6: 116,675,291 (GRCm39)	I67T	probably benign	Het
Tnik	A	G	3: 28,718,058 (GRCm39)		probably null	Het
Trav14-2	A	G	14: 53,878,515 (GRCm39)	Q66R	probably damaging	Het
Trpv6	T	A	6: 41,598,276 (GRCm39)	D677V	probably damaging	Het
Vgll4	C	T	6: 114,839,157 (GRCm39)	S278N	unknown	Het
Wdfy4	C	T	14: 32,792,575 (GRCm39)	W2157*	probably null	Het

Other mutations in Or6c5b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R7247:Or6c5b	UTSW	10	129,246,051 (GRCm39)	missense	probably damaging	0.98
R7254:Or6c5b	UTSW	10	129,245,649 (GRCm39)	missense	probably benign	0.01
R7320:Or6c5b	UTSW	10	129,245,654 (GRCm39)	missense	possibly damaging	0.80
R7343:Or6c5b	UTSW	10	129,245,852 (GRCm39)	missense	possibly damaging	0.92
R7578:Or6c5b	UTSW	10	129,245,544 (GRCm39)	missense	probably damaging	0.96
R8245:Or6c5b	UTSW	10	129,245,975 (GRCm39)	missense	probably damaging	0.99
R8750:Or6c5b	UTSW	10	129,245,649 (GRCm39)	missense	probably benign	0.01
R8919:Or6c5b	UTSW	10	129,246,082 (GRCm39)	missense	probably benign	0.07
R9397:Or6c5b	UTSW	10	129,245,909 (GRCm39)	missense	possibly damaging	0.89
R9602:Or6c5b	UTSW	10	129,245,802 (GRCm39)	missense	probably damaging	1.00
Z1177:Or6c5b	UTSW	10	129,246,072 (GRCm39)	missense	possibly damaging	0.51
Z1177:Or6c5b	UTSW	10	129,245,380 (GRCm39)	missense	probably damaging	0.97

Predicted Primers

PCR Primer
(F):5'- GTCTTATGACCGTTATGTTGCC -3'
(R):5'- CTGCTTTGGTCAGTGATGCC -3'

Sequencing Primer
(F):5'- ATGACCGTTATGTTGCCATCTG -3'
(R):5'- CAAGTGGAGAAAGCCTTTTTCCTCTG -3'

Posted On

2019-10-07