Incidental Mutation 'BB011:Prss16'
ID 642665
Institutional Source Beutler Lab
Gene Symbol Prss16
Ensembl Gene ENSMUSG00000006179
Gene Name serine protease 16 (thymus)
Synonyms TSSP
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # BB011
Quality Score 225.009
Status Not validated
Chromosome 13
Chromosomal Location 22186346-22193911 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 22192834 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Asparagine to Lysine at position 83 (N83K)
Ref Sequence ENSEMBL: ENSMUSP00000006341 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000006341] [ENSMUST00000150547]
AlphaFold Q9QXE5
Predicted Effect probably damaging
Transcript: ENSMUST00000006341
AA Change: N83K

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000006341
Gene: ENSMUSG00000006179
AA Change: N83K

DomainStartEndE-ValueType
transmembrane domain 7 26 N/A INTRINSIC
low complexity region 40 53 N/A INTRINSIC
Pfam:Peptidase_S28 63 493 1.9e-157 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000150547
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.8%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a serine protease expressed exclusively in the thymus. It is thought to play a role in the alternative antigen presenting pathway used by cortical thymic epithelial cells during the positive selection of T cells. The gene is found in the large histone gene cluster on chromosome 6, near the major histocompatibility complex (MHC) class I region. A second transcript variant has been described, but its full length nature has not been determined. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygous null mice are viable with no gross abnormalities and normal T cell development and activation. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 73 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acacb A G 5: 114,383,281 (GRCm39) K2155E possibly damaging Het
Adgre5 G A 8: 84,456,029 (GRCm39) P256S possibly damaging Het
Adipor1 T A 1: 134,353,731 (GRCm39) V172D probably damaging Het
Ahsa1 T C 12: 87,317,230 (GRCm39) probably null Het
Ankrd11 T C 8: 123,622,641 (GRCm39) I404V possibly damaging Het
Asxl3 G A 18: 22,658,602 (GRCm39) R2204Q probably damaging Het
Barhl2 A G 5: 106,605,515 (GRCm39) S65P unknown Het
Bbx A T 16: 50,044,671 (GRCm39) L630H probably damaging Het
Cars1 T C 7: 143,123,608 (GRCm39) T531A possibly damaging Het
Catsperb T A 12: 101,486,824 (GRCm39) H450Q probably benign Het
Cdt1 T C 8: 123,296,091 (GRCm39) L135P probably damaging Het
Cfap206 T A 4: 34,728,833 (GRCm39) H24L probably benign Het
Cilk1 T C 9: 78,062,746 (GRCm39) L260P probably damaging Het
Cnga4 T A 7: 105,057,028 (GRCm39) V480E probably benign Het
Cnot1 ACG A 8: 96,472,275 (GRCm39) probably null Het
Ctcfl G A 2: 172,955,449 (GRCm39) T271I possibly damaging Het
Dlc1 T C 8: 37,038,570 (GRCm39) R1003G probably benign Het
Dnah7b A G 1: 46,258,590 (GRCm39) D1927G probably benign Het
Dscc1 A T 15: 54,945,572 (GRCm39) D374E probably benign Het
Eci2 G A 13: 35,177,053 (GRCm39) Q69* probably null Het
Ep300 C A 15: 81,533,703 (GRCm39) P1920Q unknown Het
Epha5 A G 5: 84,232,705 (GRCm39) Y629H possibly damaging Het
Fat2 G A 11: 55,153,613 (GRCm39) T3533I probably benign Het
Fat3 T C 9: 15,910,593 (GRCm39) N1803S probably damaging Het
Fcrl2 T C 3: 87,166,840 (GRCm39) Y51C probably damaging Het
G530012D18Rik C G 1: 85,504,935 (GRCm39) D113E unknown Het
Gcnt2 A T 13: 41,072,040 (GRCm39) K228* probably null Het
Gucy2c A T 6: 136,740,053 (GRCm39) V258E probably benign Het
Hecw1 C A 13: 14,497,113 (GRCm39) L298F probably damaging Het
Hydin T G 8: 111,145,103 (GRCm39) V818G possibly damaging Het
Hykk A G 9: 54,829,524 (GRCm39) Y131C probably damaging Het
Mpo A G 11: 87,685,666 (GRCm39) D48G probably damaging Het
Mrps10 T C 17: 47,689,208 (GRCm39) *202Q probably null Het
Mrps14 T C 1: 160,024,559 (GRCm39) V30A probably benign Het
Mtmr7 G A 8: 41,059,927 (GRCm39) A62V possibly damaging Het
Muc2 G T 7: 141,281,631 (GRCm39) G497W probably damaging Het
Nnt A T 13: 119,523,181 (GRCm39) V237D probably damaging Het
Nox4 G T 7: 87,023,589 (GRCm39) V492L probably benign Het
Obscn C G 11: 59,003,381 (GRCm39) E1306Q probably benign Het
Or5ak23 T C 2: 85,244,563 (GRCm39) Y220C probably benign Het
Or6aa1 A G 7: 86,043,938 (GRCm39) I256T probably damaging Het
Pard3 A G 8: 128,137,231 (GRCm39) N861S probably benign Het
Pdlim4 G A 11: 53,946,048 (GRCm39) R230* probably null Het
Pinlyp C T 7: 24,241,550 (GRCm39) V159M possibly damaging Het
Plcb1 A T 2: 135,201,613 (GRCm39) T855S probably benign Het
Pot1a T A 6: 25,753,309 (GRCm39) D409V possibly damaging Het
Prom1 T C 5: 44,187,111 (GRCm39) D382G probably benign Het
Ptprn2 A G 12: 116,804,884 (GRCm39) D133G probably benign Het
Rasef C T 4: 73,659,166 (GRCm39) probably null Het
Rbak A G 5: 143,160,241 (GRCm39) S271P probably damaging Het
Rbm20 A T 19: 53,666,016 (GRCm39) I60F possibly damaging Het
Rftn1 G T 17: 50,354,408 (GRCm39) A318D probably damaging Het
Rsf1 G GACGGCCGCC 7: 97,229,116 (GRCm39) probably benign Het
Serpinb3c A G 1: 107,200,904 (GRCm39) L171P probably damaging Het
Slc25a19 T C 11: 115,506,376 (GRCm39) Y211C unknown Het
Sorbs2 C T 8: 46,248,507 (GRCm39) S586L probably damaging Het
Spesp1 A T 9: 62,180,733 (GRCm39) S58R probably benign Het
Spryd3 A G 15: 102,026,762 (GRCm39) I329T probably benign Het
St8sia2 G A 7: 73,616,700 (GRCm39) L113F probably damaging Het
Star T C 8: 26,299,883 (GRCm39) I75T possibly damaging Het
Tasor2 A T 13: 3,644,331 (GRCm39) F129Y possibly damaging Het
Tdrd6 T A 17: 43,938,697 (GRCm39) I784F possibly damaging Het
Tex55 G A 16: 38,632,826 (GRCm39) Q369* probably null Het
Tsc22d4 A G 5: 137,766,273 (GRCm39) I144V unknown Het
Tspan8 T C 10: 115,669,229 (GRCm39) probably null Het
Ttll9 C T 2: 152,804,407 (GRCm39) probably benign Het
Ubr4 T G 4: 139,194,587 (GRCm39) L1160R unknown Het
Ufd1 A G 16: 18,642,035 (GRCm39) Y162C possibly damaging Het
Unc13c A T 9: 73,641,690 (GRCm39) F1268I probably benign Het
Uvssa T C 5: 33,568,295 (GRCm39) I561T probably damaging Het
Vmn2r15 A T 5: 109,434,254 (GRCm39) S817T probably damaging Het
Ybx1 T C 4: 119,139,476 (GRCm39) E173G probably damaging Het
Zc3h6 T C 2: 128,857,400 (GRCm39) S640P possibly damaging Het
Other mutations in Prss16
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02025:Prss16 APN 13 22,187,191 (GRCm39) missense probably damaging 0.99
IGL02272:Prss16 APN 13 22,187,205 (GRCm39) missense probably damaging 0.96
IGL02383:Prss16 APN 13 22,193,697 (GRCm39) missense probably benign 0.00
IGL02892:Prss16 APN 13 22,187,220 (GRCm39) missense probably benign 0.03
IGL03325:Prss16 APN 13 22,187,417 (GRCm39) missense possibly damaging 0.90
BB001:Prss16 UTSW 13 22,192,834 (GRCm39) missense probably damaging 0.99
R0645:Prss16 UTSW 13 22,193,546 (GRCm39) unclassified probably benign
R0970:Prss16 UTSW 13 22,189,287 (GRCm39) missense probably damaging 1.00
R1146:Prss16 UTSW 13 22,191,138 (GRCm39) unclassified probably benign
R1292:Prss16 UTSW 13 22,193,691 (GRCm39) nonsense probably null
R1371:Prss16 UTSW 13 22,192,856 (GRCm39) unclassified probably benign
R1525:Prss16 UTSW 13 22,193,613 (GRCm39) missense possibly damaging 0.50
R1624:Prss16 UTSW 13 22,187,483 (GRCm39) missense probably benign 0.31
R2233:Prss16 UTSW 13 22,193,579 (GRCm39) missense possibly damaging 0.70
R5147:Prss16 UTSW 13 22,190,264 (GRCm39) missense possibly damaging 0.70
R5670:Prss16 UTSW 13 22,187,221 (GRCm39) missense possibly damaging 0.74
R6440:Prss16 UTSW 13 22,187,330 (GRCm39) missense probably damaging 0.97
R6668:Prss16 UTSW 13 22,190,918 (GRCm39) missense probably null 0.01
R6791:Prss16 UTSW 13 22,190,237 (GRCm39) missense probably damaging 0.99
R7278:Prss16 UTSW 13 22,187,317 (GRCm39) missense probably damaging 1.00
R7924:Prss16 UTSW 13 22,192,834 (GRCm39) missense probably damaging 0.99
R8865:Prss16 UTSW 13 22,187,175 (GRCm39) missense possibly damaging 0.71
R8980:Prss16 UTSW 13 22,187,212 (GRCm39) missense probably benign 0.13
R9139:Prss16 UTSW 13 22,192,513 (GRCm39) missense probably damaging 1.00
R9211:Prss16 UTSW 13 22,192,754 (GRCm39) missense probably benign 0.19
R9276:Prss16 UTSW 13 22,190,175 (GRCm39) start gained probably benign
R9318:Prss16 UTSW 13 22,191,108 (GRCm39) missense possibly damaging 0.95
R9748:Prss16 UTSW 13 22,192,504 (GRCm39) missense possibly damaging 0.88
Z1176:Prss16 UTSW 13 22,190,570 (GRCm39) start gained probably benign
Z1176:Prss16 UTSW 13 22,190,224 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- TTCTAGGCTTATCACCAGGGCC -3'
(R):5'- TTCCAGGGCCTCTAATGTCTAC -3'

Sequencing Primer
(F):5'- CCTGTGGAGAGCGCATGGTAG -3'
(R):5'- AGGGCCTCTAATGTCTACCTTTATAG -3'
Posted On 2020-08-01