Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00898:Vmn2r116'

29237

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Vmn2r116

Ensembl Gene

ENSMUSG00000090966

Gene Name

vomeronasal 2, receptor 116

Synonyms

V2Rp5, EG619697

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.062) question?

Stock #

IGL00898

Quality Score

Status

Chromosome

Chromosomal Location

23384803-23401864 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 23385995 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Serine at position 94 (N94S)

Ref Sequence

ENSEMBL: ENSMUSP00000128106 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000164856]

AlphaFold

E9Q6I0

Predicted Effect

possibly damaging
Transcript: ENSMUST00000164856
AA Change: N94S

PolyPhen 2 Score 0.944 (Sensitivity: 0.80; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000128106
Gene: ENSMUSG00000090966
AA Change: N94S

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
Pfam:ANF_receptor	73	469	4.4e-30	PFAM
Pfam:NCD3G	511	564	1.2e-22	PFAM
low complexity region	589	594	N/A	INTRINSIC
Pfam:7tm_3	595	832	8.7e-57	PFAM

Coding Region Coverage

Validation Efficiency

MGI Phenotype

PHENOTYPE: Female mice homozygous for a knock-out allele stimulated with male pheromone (Gm6084) fail to exhibit an increase in lordosis behavior and successful intromission. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 40 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcb1a	G	A	5: 8,733,690 (GRCm38)	G956S	probably damaging	Het
Alpk2	G	T	18: 65,350,573 (GRCm38)	D121E	probably benign	Het
Apc	A	G	18: 34,317,094 (GRCm38)	T2314A	probably damaging	Het
Arhgef11	T	C	3: 87,729,503 (GRCm38)	L990P	probably damaging	Het
Ccar1	T	A	10: 62,753,234 (GRCm38)	K823N	unknown	Het
Celsr2	C	T	3: 108,413,879 (GRCm38)	R539H	possibly damaging	Het
Clca3b	A	G	3: 144,844,628 (GRCm38)		probably benign	Het
Cpxcr1	T	C	X: 116,477,710 (GRCm38)	L106S	possibly damaging	Het
Edc4	T	A	8: 105,881,123 (GRCm38)	L16Q	probably damaging	Het
Emc1	A	G	4: 139,371,630 (GRCm38)	E808G	probably damaging	Het
Epha6	A	T	16: 59,775,541 (GRCm38)		probably null	Het
Epha7	G	A	4: 28,938,693 (GRCm38)	R516Q	probably damaging	Het
Fancm	T	C	12: 65,106,000 (GRCm38)	S1077P	probably benign	Het
Gm4952	C	T	19: 12,618,408 (GRCm38)	T54I	probably damaging	Het
Hnrnpm	C	A	17: 33,649,902 (GRCm38)	R517L	probably damaging	Het
Il1b	T	C	2: 129,367,333 (GRCm38)	R126G	possibly damaging	Het
Kin	G	A	2: 10,080,704 (GRCm38)	R25H	probably damaging	Het
Kin	T	C	2: 10,080,706 (GRCm38)	W26R	probably damaging	Het
Lamb3	A	T	1: 193,338,883 (GRCm38)	T923S	possibly damaging	Het
Lrp6	C	T	6: 134,479,739 (GRCm38)	S854N	probably damaging	Het
Ltv1	A	G	10: 13,182,287 (GRCm38)	F258L	probably damaging	Het
Mcm3ap	T	C	10: 76,470,325 (GRCm38)	S91P	probably benign	Het
Msra	A	G	14: 64,123,325 (GRCm38)	I125T	probably damaging	Het
Nr0b1	A	T	X: 86,192,471 (GRCm38)	Q224L	probably benign	Het
Nr2e1	T	A	10: 42,568,453 (GRCm38)	D220V	probably damaging	Het
Nup160	C	A	2: 90,693,106 (GRCm38)	H351Q	probably damaging	Het
Olfr1446	T	A	19: 12,889,918 (GRCm38)	M220L	probably benign	Het
Pcdh12	C	A	18: 38,281,457 (GRCm38)	V872L	probably benign	Het
Pcnx2	T	A	8: 125,887,585 (GRCm38)	S376C	probably damaging	Het
Pkd2	A	G	5: 104,483,135 (GRCm38)	E475G	probably damaging	Het
Psg22	A	G	7: 18,724,467 (GRCm38)	Y322C	probably damaging	Het
Rgl2	T	C	17: 33,933,418 (GRCm38)	I363T	possibly damaging	Het
Rimklb	G	T	6: 122,456,631 (GRCm38)	Q187K	possibly damaging	Het
Sectm1b	A	T	11: 121,056,249 (GRCm38)	W17R	probably damaging	Het
Snu13	C	A	15: 82,042,315 (GRCm38)	A60S	probably benign	Het
Sox30	T	A	11: 45,991,900 (GRCm38)	F586I	possibly damaging	Het
Tnfsfm13	C	A	11: 69,684,301 (GRCm38)	V220L	probably benign	Het
Ttn	A	T	2: 76,762,773 (GRCm38)	V20711E	probably damaging	Het
Yipf2	T	C	9: 21,592,524 (GRCm38)		probably null	Het
Zzef1	T	C	11: 72,875,173 (GRCm38)	S1509P	probably benign	Het

Other mutations in Vmn2r116

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00985:Vmn2r116	APN	17	23,401,515 (GRCm38)	missense	probably damaging	1.00
IGL00990:Vmn2r116	APN	17	23,387,236 (GRCm38)	missense	probably benign	0.12
IGL00990:Vmn2r116	APN	17	23,397,727 (GRCm38)	missense	probably damaging	1.00
IGL01383:Vmn2r116	APN	17	23,401,601 (GRCm38)	missense	probably damaging	1.00
IGL01459:Vmn2r116	APN	17	23,384,929 (GRCm38)	missense	probably damaging	1.00
IGL01725:Vmn2r116	APN	17	23,386,645 (GRCm38)	missense	probably damaging	1.00
IGL02125:Vmn2r116	APN	17	23,397,627 (GRCm38)	splice site	probably benign
IGL02170:Vmn2r116	APN	17	23,384,933 (GRCm38)	missense	probably benign
IGL02209:Vmn2r116	APN	17	23,388,787 (GRCm38)	missense	probably damaging	1.00
IGL02226:Vmn2r116	APN	17	23,384,834 (GRCm38)	missense	probably null
IGL02272:Vmn2r116	APN	17	23,386,004 (GRCm38)	missense	probably damaging	1.00
IGL02272:Vmn2r116	APN	17	23,385,999 (GRCm38)	missense	probably benign	0.06
IGL02403:Vmn2r116	APN	17	23,387,364 (GRCm38)	missense	probably damaging	1.00
IGL02686:Vmn2r116	APN	17	23,388,793 (GRCm38)	missense	probably damaging	0.99
IGL02750:Vmn2r116	APN	17	23,397,634 (GRCm38)	splice site	probably benign
IGL02977:Vmn2r116	APN	17	23,388,774 (GRCm38)	missense	possibly damaging	0.90
PIT4449001:Vmn2r116	UTSW	17	23,388,947 (GRCm38)	missense	probably benign	0.41
R0015:Vmn2r116	UTSW	17	23,401,849 (GRCm38)	missense	probably benign	0.03
R0219:Vmn2r116	UTSW	17	23,386,098 (GRCm38)	nonsense	probably null
R0281:Vmn2r116	UTSW	17	23,401,413 (GRCm38)	missense	possibly damaging	0.90
R0415:Vmn2r116	UTSW	17	23,387,279 (GRCm38)	missense	possibly damaging	0.55
R0592:Vmn2r116	UTSW	17	23,386,915 (GRCm38)	missense	probably damaging	0.99
R0610:Vmn2r116	UTSW	17	23,387,312 (GRCm38)	missense	probably damaging	1.00
R0635:Vmn2r116	UTSW	17	23,386,887 (GRCm38)	missense	possibly damaging	0.95
R0843:Vmn2r116	UTSW	17	23,400,960 (GRCm38)	missense	probably benign	0.01
R1329:Vmn2r116	UTSW	17	23,387,188 (GRCm38)	missense	possibly damaging	0.89
R1396:Vmn2r116	UTSW	17	23,386,141 (GRCm38)	missense	probably benign
R1401:Vmn2r116	UTSW	17	23,386,596 (GRCm38)	splice site	probably benign
R1574:Vmn2r116	UTSW	17	23,387,089 (GRCm38)	missense	probably damaging	0.99
R1574:Vmn2r116	UTSW	17	23,387,089 (GRCm38)	missense	probably damaging	0.99
R1766:Vmn2r116	UTSW	17	23,401,766 (GRCm38)	missense	probably damaging	0.98
R2157:Vmn2r116	UTSW	17	23,401,469 (GRCm38)	missense	probably damaging	1.00
R3622:Vmn2r116	UTSW	17	23,386,051 (GRCm38)	missense	probably benign	0.11
R3690:Vmn2r116	UTSW	17	23,384,824 (GRCm38)	missense	unknown
R4298:Vmn2r116	UTSW	17	23,401,827 (GRCm38)	missense	possibly damaging	0.69
R4373:Vmn2r116	UTSW	17	23,401,421 (GRCm38)	missense	probably benign	0.01
R4860:Vmn2r116	UTSW	17	23,401,803 (GRCm38)	missense	probably benign
R4941:Vmn2r116	UTSW	17	23,401,142 (GRCm38)	missense	probably damaging	1.00
R5119:Vmn2r116	UTSW	17	23,387,164 (GRCm38)	missense	probably benign	0.01
R5503:Vmn2r116	UTSW	17	23,386,804 (GRCm38)	missense	probably benign	0.07
R5510:Vmn2r116	UTSW	17	23,386,121 (GRCm38)	missense	probably damaging	1.00
R5538:Vmn2r116	UTSW	17	23,401,067 (GRCm38)	missense	probably benign	0.00
R5689:Vmn2r116	UTSW	17	23,397,719 (GRCm38)	missense	probably benign	0.30
R5765:Vmn2r116	UTSW	17	23,401,404 (GRCm38)	missense	probably damaging	0.99
R5794:Vmn2r116	UTSW	17	23,385,968 (GRCm38)	missense	probably damaging	0.99
R5807:Vmn2r116	UTSW	17	23,387,307 (GRCm38)	missense	probably damaging	1.00
R5837:Vmn2r116	UTSW	17	23,387,080 (GRCm38)	missense	probably damaging	1.00
R6262:Vmn2r116	UTSW	17	23,387,377 (GRCm38)	missense	probably benign	0.03
R6298:Vmn2r116	UTSW	17	23,386,762 (GRCm38)	missense	probably damaging	1.00
R6651:Vmn2r116	UTSW	17	23,388,831 (GRCm38)	nonsense	probably null
R6667:Vmn2r116	UTSW	17	23,401,092 (GRCm38)	missense	probably damaging	1.00
R7393:Vmn2r116	UTSW	17	23,386,125 (GRCm38)	missense	probably benign	0.14
R7571:Vmn2r116	UTSW	17	23,384,856 (GRCm38)	splice site	probably null
R7940:Vmn2r116	UTSW	17	23,386,972 (GRCm38)	missense	probably damaging	0.99
R8510:Vmn2r116	UTSW	17	23,385,931 (GRCm38)	nonsense	probably null
R8950:Vmn2r116	UTSW	17	23,401,493 (GRCm38)	missense	probably damaging	1.00
R8956:Vmn2r116	UTSW	17	23,386,762 (GRCm38)	missense	probably damaging	1.00
R8977:Vmn2r116	UTSW	17	23,386,942 (GRCm38)	missense	possibly damaging	0.56
R9030:Vmn2r116	UTSW	17	23,384,890 (GRCm38)	missense	possibly damaging	0.82
R9077:Vmn2r116	UTSW	17	23,385,982 (GRCm38)	missense	probably benign	0.14
R9223:Vmn2r116	UTSW	17	23,401,167 (GRCm38)	missense	probably damaging	1.00
R9401:Vmn2r116	UTSW	17	23,401,592 (GRCm38)	missense	probably damaging	1.00
R9449:Vmn2r116	UTSW	17	23,386,945 (GRCm38)	missense	probably benign	0.01
R9746:Vmn2r116	UTSW	17	23,401,823 (GRCm38)	missense	probably benign	0.08
R9755:Vmn2r116	UTSW	17	23,401,091 (GRCm38)	missense	probably damaging	1.00
R9759:Vmn2r116	UTSW	17	23,401,386 (GRCm38)	missense	possibly damaging	0.90
R9800:Vmn2r116	UTSW	17	23,401,425 (GRCm38)	missense	probably damaging	0.97
S24628:Vmn2r116	UTSW	17	23,387,279 (GRCm38)	missense	possibly damaging	0.55
Z1176:Vmn2r116	UTSW	17	23,401,428 (GRCm38)	missense	probably damaging	1.00
Z1177:Vmn2r116	UTSW	17	23,388,892 (GRCm38)	missense	probably benign

Posted On

2013-04-17