Incidental Mutation 'LCD18:Ncor1'
ID |
484582 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Ncor1
|
Ensembl Gene |
ENSMUSG00000018501 |
Gene Name |
nuclear receptor co-repressor 1 |
Synonyms |
Rxrip13, 5730405M06Rik, A230020K14Rik, N-CoR |
Accession Numbers |
|
Essential gene? |
Essential
(E-score: 1.000)
|
Stock # |
LCD18 (G1)
|
Quality Score |
151.81 |
Status
|
Validated
|
Chromosome |
11 |
Chromosomal Location |
62207132-62348200 bp(-) (GRCm39) |
Type of Mutation |
critical splice acceptor site |
DNA Base Change (assembly) |
N to
at 62419782 bp (GRCm38)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000122647
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000018645]
[ENSMUST00000069456]
[ENSMUST00000101066]
[ENSMUST00000101067]
[ENSMUST00000127471]
[ENSMUST00000141447]
[ENSMUST00000155486]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably benign
Transcript: ENSMUST00000018645
|
SMART Domains |
Protein: ENSMUSP00000018645 Gene: ENSMUSG00000018501
Domain | Start | End | E-Value | Type |
low complexity region
|
51 |
74 |
N/A |
INTRINSIC |
Pfam:GPS2_interact
|
150 |
239 |
1.4e-37 |
PFAM |
coiled coil region
|
302 |
329 |
N/A |
INTRINSIC |
low complexity region
|
349 |
366 |
N/A |
INTRINSIC |
SANT
|
437 |
485 |
2.76e-7 |
SMART |
coiled coil region
|
507 |
544 |
N/A |
INTRINSIC |
low complexity region
|
593 |
617 |
N/A |
INTRINSIC |
SANT
|
624 |
672 |
3.29e-14 |
SMART |
low complexity region
|
710 |
731 |
N/A |
INTRINSIC |
low complexity region
|
771 |
788 |
N/A |
INTRINSIC |
low complexity region
|
888 |
899 |
N/A |
INTRINSIC |
low complexity region
|
987 |
995 |
N/A |
INTRINSIC |
low complexity region
|
1002 |
1013 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1049 |
N/A |
INTRINSIC |
internal_repeat_2
|
1061 |
1298 |
1.62e-6 |
PROSPERO |
internal_repeat_2
|
1299 |
1515 |
1.62e-6 |
PROSPERO |
low complexity region
|
1516 |
1527 |
N/A |
INTRINSIC |
coiled coil region
|
1712 |
1749 |
N/A |
INTRINSIC |
low complexity region
|
1834 |
1848 |
N/A |
INTRINSIC |
low complexity region
|
1969 |
1980 |
N/A |
INTRINSIC |
low complexity region
|
2036 |
2055 |
N/A |
INTRINSIC |
PDB:3N00|B
|
2064 |
2084 |
4e-7 |
PDB |
low complexity region
|
2086 |
2101 |
N/A |
INTRINSIC |
low complexity region
|
2157 |
2168 |
N/A |
INTRINSIC |
PDB:2OVM|B
|
2267 |
2290 |
2e-8 |
PDB |
low complexity region
|
2311 |
2324 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000069456
|
SMART Domains |
Protein: ENSMUSP00000068974 Gene: ENSMUSG00000018501
Domain | Start | End | E-Value | Type |
low complexity region
|
51 |
74 |
N/A |
INTRINSIC |
coiled coil region
|
176 |
217 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000101066
|
SMART Domains |
Protein: ENSMUSP00000098627 Gene: ENSMUSG00000018501
Domain | Start | End | E-Value | Type |
low complexity region
|
51 |
74 |
N/A |
INTRINSIC |
coiled coil region
|
176 |
217 |
N/A |
INTRINSIC |
coiled coil region
|
302 |
329 |
N/A |
INTRINSIC |
low complexity region
|
349 |
366 |
N/A |
INTRINSIC |
SANT
|
437 |
485 |
2.76e-7 |
SMART |
coiled coil region
|
507 |
544 |
N/A |
INTRINSIC |
low complexity region
|
593 |
617 |
N/A |
INTRINSIC |
SANT
|
624 |
672 |
3.29e-14 |
SMART |
low complexity region
|
710 |
731 |
N/A |
INTRINSIC |
low complexity region
|
771 |
788 |
N/A |
INTRINSIC |
low complexity region
|
888 |
899 |
N/A |
INTRINSIC |
low complexity region
|
987 |
995 |
N/A |
INTRINSIC |
low complexity region
|
1002 |
1013 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1049 |
N/A |
INTRINSIC |
internal_repeat_2
|
1061 |
1298 |
1.62e-6 |
PROSPERO |
internal_repeat_2
|
1299 |
1515 |
1.62e-6 |
PROSPERO |
low complexity region
|
1516 |
1527 |
N/A |
INTRINSIC |
coiled coil region
|
1712 |
1749 |
N/A |
INTRINSIC |
low complexity region
|
1834 |
1848 |
N/A |
INTRINSIC |
low complexity region
|
1969 |
1980 |
N/A |
INTRINSIC |
low complexity region
|
2036 |
2055 |
N/A |
INTRINSIC |
PDB:3N00|B
|
2064 |
2084 |
4e-7 |
PDB |
low complexity region
|
2086 |
2101 |
N/A |
INTRINSIC |
low complexity region
|
2157 |
2168 |
N/A |
INTRINSIC |
PDB:2OVM|B
|
2267 |
2290 |
2e-8 |
PDB |
low complexity region
|
2311 |
2324 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000101067
|
SMART Domains |
Protein: ENSMUSP00000098628 Gene: ENSMUSG00000018501
Domain | Start | End | E-Value | Type |
low complexity region
|
51 |
74 |
N/A |
INTRINSIC |
coiled coil region
|
176 |
217 |
N/A |
INTRINSIC |
coiled coil region
|
302 |
329 |
N/A |
INTRINSIC |
low complexity region
|
349 |
366 |
N/A |
INTRINSIC |
SANT
|
437 |
485 |
2.76e-7 |
SMART |
coiled coil region
|
507 |
544 |
N/A |
INTRINSIC |
low complexity region
|
593 |
617 |
N/A |
INTRINSIC |
SANT
|
624 |
672 |
3.29e-14 |
SMART |
low complexity region
|
716 |
734 |
N/A |
INTRINSIC |
low complexity region
|
838 |
849 |
N/A |
INTRINSIC |
low complexity region
|
937 |
945 |
N/A |
INTRINSIC |
low complexity region
|
952 |
963 |
N/A |
INTRINSIC |
low complexity region
|
986 |
999 |
N/A |
INTRINSIC |
low complexity region
|
1448 |
1459 |
N/A |
INTRINSIC |
coiled coil region
|
1645 |
1682 |
N/A |
INTRINSIC |
low complexity region
|
1767 |
1781 |
N/A |
INTRINSIC |
low complexity region
|
1902 |
1913 |
N/A |
INTRINSIC |
low complexity region
|
1969 |
1988 |
N/A |
INTRINSIC |
PDB:3N00|B
|
1997 |
2017 |
4e-7 |
PDB |
low complexity region
|
2019 |
2034 |
N/A |
INTRINSIC |
low complexity region
|
2089 |
2100 |
N/A |
INTRINSIC |
PDB:2OVM|B
|
2199 |
2222 |
2e-8 |
PDB |
low complexity region
|
2243 |
2256 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000101068
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000127471
|
SMART Domains |
Protein: ENSMUSP00000121806 Gene: ENSMUSG00000018501
Domain | Start | End | E-Value | Type |
low complexity region
|
51 |
74 |
N/A |
INTRINSIC |
coiled coil region
|
176 |
217 |
N/A |
INTRINSIC |
coiled coil region
|
302 |
329 |
N/A |
INTRINSIC |
low complexity region
|
349 |
366 |
N/A |
INTRINSIC |
SANT
|
437 |
485 |
2.76e-7 |
SMART |
coiled coil region
|
508 |
545 |
N/A |
INTRINSIC |
low complexity region
|
594 |
618 |
N/A |
INTRINSIC |
SANT
|
625 |
673 |
3.29e-14 |
SMART |
low complexity region
|
711 |
732 |
N/A |
INTRINSIC |
low complexity region
|
756 |
773 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000141447
|
SMART Domains |
Protein: ENSMUSP00000123822 Gene: ENSMUSG00000018501
Domain | Start | End | E-Value | Type |
low complexity region
|
51 |
74 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000155486
|
SMART Domains |
Protein: ENSMUSP00000122647 Gene: ENSMUSG00000018501
Domain | Start | End | E-Value | Type |
low complexity region
|
51 |
74 |
N/A |
INTRINSIC |
coiled coil region
|
176 |
217 |
N/A |
INTRINSIC |
coiled coil region
|
311 |
338 |
N/A |
INTRINSIC |
low complexity region
|
358 |
375 |
N/A |
INTRINSIC |
SANT
|
446 |
494 |
2.76e-7 |
SMART |
coiled coil region
|
516 |
541 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
- 1x: 0.0%
- 3x: 0.0%
- 10x: 0.0%
- 20x: 0.0%
|
Validation Efficiency |
88% (169/191) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein that mediates ligand-independent transcription repression of thyroid-hormone and retinoic-acid receptors by promoting chromatin condensation and preventing access of the transcription machinery. It is part of a complex which also includes histone deacetylases and transcriptional regulators similar to the yeast protein Sin3p. This gene is located between the Charcot-Marie-Tooth and Smith-Magenis syndrome critical regions on chromosome 17. Alternate splicing results in multiple transcript variants. Pseudogenes of this gene are found on chromosomes 17 and 20.[provided by RefSeq, Jun 2010] PHENOTYPE: Mice homozygous for a targeted mutation in this gene exhibit embryonic lethality with erythrocytic, thymocytic and central nervous system development abnormalities. Mice homozygous for a hypomorphic allele exhibit increased thyroid hormone sensitivity under hypothyroid conditions. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 113 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
A330008L17Rik |
A |
G |
8: 100,450,057 (GRCm39) |
|
noncoding transcript |
Het |
Aff2 |
C |
A |
X: 68,791,141 (GRCm39) |
|
probably benign |
Het |
Aldh1a1 |
C |
A |
19: 20,604,010 (GRCm39) |
|
probably benign |
Het |
Anxa7 |
C |
T |
14: 20,519,479 (GRCm39) |
G113E |
probably damaging |
Het |
Apba2 |
A |
T |
7: 64,271,908 (GRCm39) |
|
probably benign |
Het |
Apc2 |
G |
C |
10: 80,135,808 (GRCm39) |
|
probably benign |
Het |
App |
C |
G |
16: 84,822,300 (GRCm39) |
|
probably benign |
Het |
Asic2 |
C |
A |
11: 80,876,570 (GRCm39) |
|
probably benign |
Het |
Btk |
T |
C |
X: 133,479,574 (GRCm39) |
|
probably benign |
Het |
Car12 |
C |
A |
9: 66,668,958 (GRCm39) |
|
probably benign |
Het |
Ccdc121 |
GAGAAG |
GAG |
5: 31,644,717 (GRCm39) |
|
probably benign |
Het |
Ccdc191 |
G |
A |
16: 43,742,164 (GRCm39) |
|
probably benign |
Het |
Ccdc34 |
N |
|
2: 110,016,318 (GRCm38) |
|
probably benign |
Het |
Cd164 |
G |
T |
10: 41,397,922 (GRCm39) |
A59S |
probably benign |
Het |
Cd22 |
C |
T |
7: 30,577,507 (GRCm39) |
R2H |
possibly damaging |
Het |
Cdv3 |
C |
A |
9: 103,242,553 (GRCm39) |
|
probably benign |
Het |
Cdv3 |
A |
T |
9: 103,242,542 (GRCm39) |
|
probably benign |
Het |
Celf2 |
N |
|
2: 6,779,076 (GRCm38) |
|
probably benign |
Het |
Cfap299 |
G |
A |
5: 98,855,367 (GRCm39) |
|
probably benign |
Het |
Clec18a |
C |
A |
8: 111,802,768 (GRCm39) |
|
probably benign |
Het |
Cnpy3 |
GGATGGAT |
GGATAGATAGATAGATAGATGGAT |
17: 47,048,462 (GRCm39) |
|
probably benign |
Het |
Cntn4 |
A |
G |
6: 106,530,901 (GRCm39) |
|
probably benign |
Het |
Cntnap5c |
G |
C |
17: 58,469,155 (GRCm39) |
|
probably benign |
Het |
Col2a1 |
C |
A |
15: 97,886,862 (GRCm39) |
|
probably null |
Het |
Cpne3 |
G |
T |
4: 19,563,382 (GRCm39) |
|
probably benign |
Het |
Cracd |
GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG |
GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG |
5: 76,806,589 (GRCm39) |
|
probably benign |
Het |
Dab1 |
T |
G |
4: 103,903,769 (GRCm39) |
|
probably benign |
Het |
Dapp1 |
G |
A |
3: 137,645,161 (GRCm39) |
|
probably benign |
Het |
Dcc |
G |
A |
18: 72,430,518 (GRCm39) |
|
probably benign |
Het |
Dcun1d1 |
GAAAAAAAAA |
GAAAAAAAAAA |
3: 35,992,154 (GRCm39) |
|
probably benign |
Het |
Dennd1b |
G |
A |
1: 139,042,502 (GRCm39) |
|
probably benign |
Het |
Dhdds |
TAA |
TA |
4: 133,697,674 (GRCm39) |
|
probably benign |
Het |
Dnah12 |
G |
T |
14: 26,571,342 (GRCm39) |
G2817V |
probably damaging |
Het |
Dnm3 |
CATATATATATATATATATATATA |
CATATATATATATATATATATA |
1: 162,234,130 (GRCm39) |
|
probably benign |
Het |
Dock10 |
N |
|
1: 80,716,623 (GRCm38) |
|
probably benign |
Het |
Dusp10 |
G |
T |
1: 183,769,253 (GRCm39) |
C73F |
probably damaging |
Het |
Fgf20 |
A |
C |
8: 40,745,359 (GRCm39) |
|
probably benign |
Het |
Ftsj3 |
G |
T |
11: 106,140,885 (GRCm39) |
|
probably benign |
Het |
Gls |
T |
G |
1: 52,222,526 (GRCm39) |
|
probably benign |
Het |
Gm12130 |
T |
C |
11: 38,397,750 (GRCm39) |
|
noncoding transcript |
Het |
Gm14936 |
G |
A |
X: 111,908,447 (GRCm39) |
|
noncoding transcript |
Het |
Gm16630 |
C |
T |
6: 48,118,203 (GRCm39) |
|
noncoding transcript |
Het |
Gm22194 |
AGTGTGTGTGTGTGTGTGTGTGTGTGTGTG |
AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG |
10: 11,816,707 (GRCm39) |
|
noncoding transcript |
Het |
Gm26917 |
C |
G |
17: 40,154,862 (GRCm39) |
|
noncoding transcript |
Het |
Gm35048 |
GACACACACACACACACACACACACACACACACACACAC |
GACACACACACACACACACACACACACACACACACAC |
1: 90,449,248 (GRCm39) |
|
noncoding transcript |
Het |
Gm37311 |
G |
A |
16: 77,415,169 (GRCm39) |
|
noncoding transcript |
Het |
Gm37928 |
AACACACACACACACACACACACACACACACACA |
AACACACACACACACACACACACACACACACACACA |
3: 118,328,206 (GRCm39) |
|
noncoding transcript |
Het |
Gm4302 |
T |
C |
10: 100,177,306 (GRCm39) |
W197R |
probably benign |
Het |
H2-Q4 |
G |
A |
17: 35,599,381 (GRCm39) |
D155N |
probably damaging |
Het |
H2-T23 |
T |
C |
17: 36,342,108 (GRCm39) |
|
probably benign |
Het |
Hgs |
CTTTTTTT |
CTTTTTT |
11: 120,360,404 (GRCm39) |
|
probably benign |
Het |
Ighv5-9 |
C |
T |
12: 113,625,497 (GRCm39) |
S82N |
probably benign |
Het |
Il1rap |
C |
A |
16: 26,450,343 (GRCm39) |
|
probably benign |
Het |
Inhbc |
N |
|
10: 127,367,140 (GRCm38) |
|
probably benign |
Het |
Inpp4b |
C |
T |
8: 82,419,639 (GRCm39) |
|
probably benign |
Het |
Kars1 |
N |
|
8: 111,993,708 (GRCm38) |
|
probably benign |
Het |
Kcng4 |
G |
T |
8: 120,360,258 (GRCm39) |
Y39* |
probably null |
Het |
Kcnh7 |
A |
G |
2: 62,880,143 (GRCm39) |
|
probably benign |
Het |
Klhl1 |
G |
C |
14: 96,555,166 (GRCm39) |
|
probably benign |
Het |
Lrch1 |
C |
T |
14: 75,142,461 (GRCm39) |
|
probably benign |
Het |
Lrp1b |
G |
C |
2: 42,127,574 (GRCm39) |
|
probably benign |
Het |
Lsm8 |
G |
A |
6: 18,844,315 (GRCm39) |
|
probably benign |
Het |
Lsm8 |
G |
A |
6: 18,854,320 (GRCm39) |
|
probably benign |
Het |
Magi2 |
T |
C |
5: 20,159,509 (GRCm39) |
|
probably benign |
Het |
Matcap2 |
N |
|
9: 22,442,083 (GRCm38) |
|
probably benign |
Het |
Mef2c |
G |
A |
13: 83,753,942 (GRCm39) |
|
probably benign |
Het |
Mei4 |
A |
G |
9: 82,069,012 (GRCm39) |
|
probably benign |
Het |
Mid1 |
T |
A |
X: 168,788,560 (GRCm39) |
|
probably benign |
Het |
Mndal |
G |
C |
1: 173,707,784 (GRCm39) |
|
probably benign |
Het |
Mpped2 |
C |
A |
2: 106,551,773 (GRCm39) |
|
probably benign |
Het |
Mtarc2 |
TAGGCAGCCAATCAGAGCACTGCCTCTCAGCGCCAGGCAGCCAATCAGAGCACTGCCTCTCAGCGCCAGGCA |
TAGGCAGCCAATCAGAGCACTGCCTCTCAGCGCCAGGCA |
1: 184,554,985 (GRCm39) |
|
probably benign |
Het |
Mtf1 |
A |
G |
4: 124,723,109 (GRCm39) |
|
probably benign |
Het |
Mxd1 |
T |
C |
6: 86,644,388 (GRCm39) |
|
probably benign |
Het |
Nbea |
G |
T |
3: 55,608,948 (GRCm39) |
|
probably benign |
Het |
Nox4 |
A |
G |
7: 86,892,275 (GRCm39) |
|
probably benign |
Het |
Ocln |
C |
T |
13: 100,657,075 (GRCm39) |
|
probably benign |
Het |
Ofcc1 |
G |
A |
13: 40,246,443 (GRCm39) |
|
probably benign |
Het |
Or5af2 |
T |
A |
11: 58,708,266 (GRCm39) |
V144D |
possibly damaging |
Het |
Paics |
N |
|
5: 76,956,744 (GRCm38) |
|
probably null |
Het |
Paqr8 |
G |
T |
1: 20,984,882 (GRCm39) |
|
probably benign |
Het |
Pate9 |
T |
C |
9: 36,444,849 (GRCm39) |
|
probably benign |
Het |
Pdss1 |
C |
T |
2: 22,790,980 (GRCm39) |
|
probably benign |
Het |
Piezo1 |
G |
A |
8: 123,222,308 (GRCm39) |
R503W |
probably damaging |
Het |
Pkhd1 |
G |
A |
1: 20,681,638 (GRCm39) |
|
probably benign |
Het |
Ppp1r3f |
C |
A |
X: 7,426,575 (GRCm39) |
G562V |
probably damaging |
Het |
Prr16 |
C |
T |
18: 51,333,396 (GRCm39) |
|
probably benign |
Het |
Prss38 |
T |
G |
11: 59,266,467 (GRCm39) |
|
probably benign |
Het |
Prxl2c |
G |
A |
13: 64,435,099 (GRCm39) |
|
probably benign |
Het |
Ptprk |
T |
C |
10: 28,450,983 (GRCm39) |
|
probably benign |
Het |
Pum1 |
N |
|
4: 130,730,549 (GRCm38) |
|
probably benign |
Het |
Rabgef1 |
N |
|
5: 130,187,586 (GRCm38) |
|
probably null |
Het |
Rgs16 |
G |
A |
1: 153,619,976 (GRCm39) |
|
probably benign |
Het |
Riok3 |
G |
T |
18: 12,263,039 (GRCm39) |
|
probably benign |
Het |
Rn18s-rs5 |
T |
C |
17: 40,159,446 (GRCm39) |
|
noncoding transcript |
Het |
Robo2 |
N |
|
16: 74,055,954 (GRCm38) |
|
probably benign |
Het |
Rps6ka3 |
A |
G |
X: 158,062,211 (GRCm39) |
|
probably benign |
Het |
Rptn |
T |
A |
3: 93,304,848 (GRCm39) |
L727Q |
probably benign |
Het |
Slc25a46 |
C |
A |
18: 31,730,366 (GRCm39) |
|
probably benign |
Het |
Spata31f1e |
T |
C |
4: 42,792,885 (GRCm39) |
T416A |
probably benign |
Het |
Spsb1 |
C |
T |
4: 150,036,943 (GRCm39) |
|
probably benign |
Het |
Tbc1d19 |
A |
C |
5: 53,974,051 (GRCm39) |
|
probably benign |
Het |
Trav7-4 |
C |
T |
14: 53,698,975 (GRCm39) |
L41F |
probably benign |
Het |
Trip12 |
N |
|
1: 84,754,482 (GRCm38) |
|
probably benign |
Het |
Ttc13 |
G |
A |
8: 125,402,605 (GRCm39) |
|
probably benign |
Het |
Ttll6 |
C |
T |
11: 96,046,084 (GRCm39) |
|
probably benign |
Het |
Unc5b |
C |
G |
10: 60,621,950 (GRCm39) |
|
probably benign |
Het |
Vmn2r87 |
C |
T |
10: 130,314,583 (GRCm39) |
M334I |
probably benign |
Het |
Vps13b |
G |
T |
15: 35,847,103 (GRCm39) |
A2629S |
probably damaging |
Het |
Wars2 |
N |
|
3: 99,214,774 (GRCm38) |
|
probably null |
Het |
Zdhhc3 |
AACACACACACACACACACACACACACACACAC |
AACACACACACACACACACACACACACACACACAC |
9: 122,912,087 (GRCm39) |
|
probably benign |
Het |
Zfp26 |
C |
A |
9: 20,349,842 (GRCm39) |
A241S |
probably benign |
Het |
Zfp442 |
C |
T |
2: 150,261,768 (GRCm39) |
|
probably benign |
Het |
Zfp808 |
C |
T |
13: 62,314,465 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Ncor1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01067:Ncor1
|
APN |
11 |
62,283,354 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01343:Ncor1
|
APN |
11 |
62,216,312 (GRCm39) |
critical splice donor site |
probably null |
|
IGL01392:Ncor1
|
APN |
11 |
62,231,420 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01402:Ncor1
|
APN |
11 |
62,231,300 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01714:Ncor1
|
APN |
11 |
62,225,410 (GRCm39) |
missense |
possibly damaging |
0.58 |
IGL01772:Ncor1
|
APN |
11 |
62,240,173 (GRCm39) |
intron |
probably benign |
|
IGL01889:Ncor1
|
APN |
11 |
62,225,427 (GRCm39) |
missense |
possibly damaging |
0.69 |
IGL02058:Ncor1
|
APN |
11 |
62,235,463 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02065:Ncor1
|
APN |
11 |
62,310,435 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL02073:Ncor1
|
APN |
11 |
62,249,743 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02176:Ncor1
|
APN |
11 |
62,220,485 (GRCm39) |
unclassified |
probably benign |
|
IGL02288:Ncor1
|
APN |
11 |
62,240,229 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02348:Ncor1
|
APN |
11 |
62,224,485 (GRCm39) |
splice site |
probably benign |
|
IGL02608:Ncor1
|
APN |
11 |
62,264,040 (GRCm39) |
missense |
probably benign |
0.07 |
laggard
|
UTSW |
11 |
62,260,130 (GRCm39) |
missense |
probably damaging |
1.00 |
Shortstep
|
UTSW |
11 |
62,225,367 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4382001:Ncor1
|
UTSW |
11 |
62,235,489 (GRCm39) |
missense |
probably damaging |
0.96 |
PIT4576001:Ncor1
|
UTSW |
11 |
62,224,543 (GRCm39) |
missense |
probably damaging |
0.99 |
R0026:Ncor1
|
UTSW |
11 |
62,329,255 (GRCm39) |
missense |
probably damaging |
1.00 |
R0038:Ncor1
|
UTSW |
11 |
62,283,377 (GRCm39) |
missense |
probably damaging |
0.99 |
R0038:Ncor1
|
UTSW |
11 |
62,283,377 (GRCm39) |
missense |
probably damaging |
0.99 |
R0103:Ncor1
|
UTSW |
11 |
62,233,871 (GRCm39) |
missense |
possibly damaging |
0.85 |
R0103:Ncor1
|
UTSW |
11 |
62,233,871 (GRCm39) |
missense |
possibly damaging |
0.85 |
R0144:Ncor1
|
UTSW |
11 |
62,283,421 (GRCm39) |
missense |
probably damaging |
1.00 |
R0427:Ncor1
|
UTSW |
11 |
62,301,746 (GRCm39) |
missense |
probably damaging |
1.00 |
R0501:Ncor1
|
UTSW |
11 |
62,264,148 (GRCm39) |
missense |
possibly damaging |
0.73 |
R0544:Ncor1
|
UTSW |
11 |
62,224,603 (GRCm39) |
missense |
probably damaging |
1.00 |
R0544:Ncor1
|
UTSW |
11 |
62,224,602 (GRCm39) |
missense |
probably damaging |
1.00 |
R0563:Ncor1
|
UTSW |
11 |
62,234,056 (GRCm39) |
missense |
probably damaging |
0.97 |
R1074:Ncor1
|
UTSW |
11 |
62,283,377 (GRCm39) |
missense |
probably damaging |
0.99 |
R1266:Ncor1
|
UTSW |
11 |
62,224,866 (GRCm39) |
missense |
probably damaging |
0.98 |
R1444:Ncor1
|
UTSW |
11 |
62,294,632 (GRCm39) |
missense |
probably damaging |
1.00 |
R1452:Ncor1
|
UTSW |
11 |
62,225,457 (GRCm39) |
missense |
probably damaging |
1.00 |
R1534:Ncor1
|
UTSW |
11 |
62,269,330 (GRCm39) |
missense |
possibly damaging |
0.92 |
R1710:Ncor1
|
UTSW |
11 |
62,313,831 (GRCm39) |
missense |
probably damaging |
1.00 |
R1762:Ncor1
|
UTSW |
11 |
62,275,610 (GRCm39) |
missense |
possibly damaging |
0.82 |
R1771:Ncor1
|
UTSW |
11 |
62,217,938 (GRCm39) |
missense |
probably damaging |
1.00 |
R1864:Ncor1
|
UTSW |
11 |
62,272,245 (GRCm39) |
missense |
probably damaging |
1.00 |
R1902:Ncor1
|
UTSW |
11 |
62,228,984 (GRCm39) |
missense |
probably damaging |
1.00 |
R1906:Ncor1
|
UTSW |
11 |
62,240,211 (GRCm39) |
missense |
possibly damaging |
0.81 |
R2009:Ncor1
|
UTSW |
11 |
62,216,427 (GRCm39) |
missense |
probably benign |
0.43 |
R3708:Ncor1
|
UTSW |
11 |
62,235,513 (GRCm39) |
missense |
probably damaging |
1.00 |
R3825:Ncor1
|
UTSW |
11 |
62,264,183 (GRCm39) |
missense |
probably benign |
0.00 |
R3923:Ncor1
|
UTSW |
11 |
62,216,442 (GRCm39) |
missense |
probably damaging |
1.00 |
R3966:Ncor1
|
UTSW |
11 |
62,235,583 (GRCm39) |
missense |
probably damaging |
1.00 |
R4049:Ncor1
|
UTSW |
11 |
62,220,494 (GRCm39) |
splice site |
probably null |
|
R4350:Ncor1
|
UTSW |
11 |
62,301,644 (GRCm39) |
critical splice donor site |
probably null |
|
R4351:Ncor1
|
UTSW |
11 |
62,301,644 (GRCm39) |
critical splice donor site |
probably null |
|
R4359:Ncor1
|
UTSW |
11 |
62,249,736 (GRCm39) |
missense |
probably damaging |
1.00 |
R4712:Ncor1
|
UTSW |
11 |
62,235,660 (GRCm39) |
missense |
probably damaging |
1.00 |
R4723:Ncor1
|
UTSW |
11 |
62,269,438 (GRCm39) |
missense |
probably benign |
0.26 |
R4863:Ncor1
|
UTSW |
11 |
62,283,464 (GRCm39) |
missense |
possibly damaging |
0.92 |
R4875:Ncor1
|
UTSW |
11 |
62,324,437 (GRCm39) |
small deletion |
probably benign |
|
R4956:Ncor1
|
UTSW |
11 |
62,231,431 (GRCm39) |
missense |
probably damaging |
1.00 |
R4993:Ncor1
|
UTSW |
11 |
62,234,167 (GRCm39) |
missense |
probably damaging |
1.00 |
R5079:Ncor1
|
UTSW |
11 |
62,236,063 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5144:Ncor1
|
UTSW |
11 |
62,240,290 (GRCm39) |
missense |
probably damaging |
1.00 |
R5223:Ncor1
|
UTSW |
11 |
62,229,826 (GRCm39) |
missense |
probably damaging |
1.00 |
R5243:Ncor1
|
UTSW |
11 |
62,229,788 (GRCm39) |
missense |
probably damaging |
1.00 |
R5271:Ncor1
|
UTSW |
11 |
62,231,371 (GRCm39) |
missense |
probably damaging |
1.00 |
R5285:Ncor1
|
UTSW |
11 |
62,283,475 (GRCm39) |
missense |
probably damaging |
1.00 |
R5533:Ncor1
|
UTSW |
11 |
62,233,837 (GRCm39) |
missense |
probably benign |
0.00 |
R5580:Ncor1
|
UTSW |
11 |
62,280,604 (GRCm39) |
nonsense |
probably null |
|
R5593:Ncor1
|
UTSW |
11 |
62,260,130 (GRCm39) |
missense |
probably damaging |
1.00 |
R5609:Ncor1
|
UTSW |
11 |
62,249,679 (GRCm39) |
splice site |
probably null |
|
R5632:Ncor1
|
UTSW |
11 |
62,229,060 (GRCm39) |
missense |
possibly damaging |
0.85 |
R5830:Ncor1
|
UTSW |
11 |
62,235,589 (GRCm39) |
missense |
possibly damaging |
0.71 |
R5896:Ncor1
|
UTSW |
11 |
62,274,016 (GRCm39) |
missense |
probably damaging |
1.00 |
R5973:Ncor1
|
UTSW |
11 |
62,240,136 (GRCm39) |
splice site |
probably null |
|
R6013:Ncor1
|
UTSW |
11 |
62,211,903 (GRCm39) |
missense |
probably benign |
|
R6019:Ncor1
|
UTSW |
11 |
62,263,987 (GRCm39) |
missense |
probably benign |
0.00 |
R6032:Ncor1
|
UTSW |
11 |
62,264,147 (GRCm39) |
missense |
possibly damaging |
0.54 |
R6032:Ncor1
|
UTSW |
11 |
62,264,147 (GRCm39) |
missense |
possibly damaging |
0.54 |
R6075:Ncor1
|
UTSW |
11 |
62,208,675 (GRCm39) |
missense |
probably damaging |
1.00 |
R6091:Ncor1
|
UTSW |
11 |
62,310,443 (GRCm39) |
missense |
probably damaging |
0.98 |
R6248:Ncor1
|
UTSW |
11 |
62,257,808 (GRCm39) |
missense |
probably damaging |
1.00 |
R6281:Ncor1
|
UTSW |
11 |
62,264,371 (GRCm39) |
missense |
possibly damaging |
0.71 |
R6351:Ncor1
|
UTSW |
11 |
62,264,124 (GRCm39) |
missense |
probably benign |
0.30 |
R6469:Ncor1
|
UTSW |
11 |
62,234,128 (GRCm39) |
missense |
probably damaging |
1.00 |
R6502:Ncor1
|
UTSW |
11 |
62,272,240 (GRCm39) |
nonsense |
probably null |
|
R6614:Ncor1
|
UTSW |
11 |
62,221,645 (GRCm39) |
missense |
probably benign |
0.01 |
R6650:Ncor1
|
UTSW |
11 |
62,225,367 (GRCm39) |
missense |
probably damaging |
1.00 |
R6765:Ncor1
|
UTSW |
11 |
62,264,272 (GRCm39) |
missense |
probably benign |
0.01 |
R6852:Ncor1
|
UTSW |
11 |
62,234,071 (GRCm39) |
missense |
probably damaging |
0.97 |
R6909:Ncor1
|
UTSW |
11 |
62,220,312 (GRCm39) |
missense |
probably damaging |
1.00 |
R6965:Ncor1
|
UTSW |
11 |
62,244,059 (GRCm39) |
critical splice donor site |
probably null |
|
R7054:Ncor1
|
UTSW |
11 |
62,275,619 (GRCm39) |
missense |
probably null |
|
R7248:Ncor1
|
UTSW |
11 |
62,275,598 (GRCm39) |
missense |
possibly damaging |
0.89 |
R7352:Ncor1
|
UTSW |
11 |
62,224,737 (GRCm39) |
missense |
probably damaging |
0.99 |
R7396:Ncor1
|
UTSW |
11 |
62,234,044 (GRCm39) |
missense |
probably damaging |
0.99 |
R7434:Ncor1
|
UTSW |
11 |
62,274,025 (GRCm39) |
missense |
probably damaging |
0.99 |
R7552:Ncor1
|
UTSW |
11 |
62,264,250 (GRCm39) |
missense |
possibly damaging |
0.53 |
R7565:Ncor1
|
UTSW |
11 |
62,292,091 (GRCm39) |
missense |
probably damaging |
1.00 |
R7575:Ncor1
|
UTSW |
11 |
62,274,082 (GRCm39) |
missense |
probably benign |
0.21 |
R7622:Ncor1
|
UTSW |
11 |
62,208,794 (GRCm39) |
missense |
probably benign |
0.00 |
R7664:Ncor1
|
UTSW |
11 |
62,289,154 (GRCm39) |
missense |
probably damaging |
1.00 |
R7814:Ncor1
|
UTSW |
11 |
62,224,752 (GRCm39) |
missense |
probably damaging |
0.99 |
R7963:Ncor1
|
UTSW |
11 |
62,225,359 (GRCm39) |
missense |
probably benign |
0.28 |
R7990:Ncor1
|
UTSW |
11 |
62,240,321 (GRCm39) |
critical splice acceptor site |
probably null |
|
R8302:Ncor1
|
UTSW |
11 |
62,224,681 (GRCm39) |
missense |
probably benign |
0.00 |
R8334:Ncor1
|
UTSW |
11 |
62,274,070 (GRCm39) |
missense |
probably damaging |
0.99 |
R8512:Ncor1
|
UTSW |
11 |
62,324,437 (GRCm39) |
small deletion |
probably benign |
|
R8728:Ncor1
|
UTSW |
11 |
62,221,685 (GRCm39) |
missense |
probably benign |
0.04 |
R8777:Ncor1
|
UTSW |
11 |
62,324,494 (GRCm39) |
missense |
probably damaging |
1.00 |
R8777:Ncor1
|
UTSW |
11 |
62,324,492 (GRCm39) |
missense |
probably benign |
0.03 |
R8777-TAIL:Ncor1
|
UTSW |
11 |
62,324,494 (GRCm39) |
missense |
probably damaging |
1.00 |
R8777-TAIL:Ncor1
|
UTSW |
11 |
62,324,492 (GRCm39) |
missense |
probably benign |
0.03 |
R8821:Ncor1
|
UTSW |
11 |
62,260,234 (GRCm39) |
missense |
probably benign |
0.07 |
R8831:Ncor1
|
UTSW |
11 |
62,260,234 (GRCm39) |
missense |
probably benign |
0.07 |
R8988:Ncor1
|
UTSW |
11 |
62,233,871 (GRCm39) |
nonsense |
probably null |
|
R9111:Ncor1
|
UTSW |
11 |
62,280,585 (GRCm39) |
missense |
possibly damaging |
0.95 |
R9147:Ncor1
|
UTSW |
11 |
62,224,672 (GRCm39) |
missense |
probably damaging |
1.00 |
R9391:Ncor1
|
UTSW |
11 |
62,216,376 (GRCm39) |
nonsense |
probably null |
|
R9467:Ncor1
|
UTSW |
11 |
62,324,448 (GRCm39) |
small insertion |
probably benign |
|
R9467:Ncor1
|
UTSW |
11 |
62,324,437 (GRCm39) |
small insertion |
probably benign |
|
R9510:Ncor1
|
UTSW |
11 |
62,324,442 (GRCm39) |
small insertion |
probably benign |
|
R9511:Ncor1
|
UTSW |
11 |
62,324,449 (GRCm39) |
small insertion |
probably benign |
|
R9560:Ncor1
|
UTSW |
11 |
62,263,948 (GRCm39) |
missense |
possibly damaging |
0.96 |
R9687:Ncor1
|
UTSW |
11 |
62,260,193 (GRCm39) |
missense |
possibly damaging |
0.93 |
X0065:Ncor1
|
UTSW |
11 |
62,249,817 (GRCm39) |
missense |
probably benign |
0.23 |
X0065:Ncor1
|
UTSW |
11 |
62,245,395 (GRCm39) |
critical splice donor site |
probably null |
|
Z1176:Ncor1
|
UTSW |
11 |
62,329,342 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
Predicted Primers |
|
Posted On |
2017-08-15 |