|Institutional Source||Beutler Lab|
|Gene Name||spalt like transcription factor 1|
|Is this an essential gene?||Probably essential (E-score: 0.954)|
|Stock #||R7555 (G1)|
|Chromosomal Location||89027235-89044162 bp(-) (GRCm38)|
|Type of Mutation||missense|
|DNA Base Change (assembly)||T to C at 89033158 bp (GRCm38)|
|Amino Acid Change||Aspartic acid to Glycine at position 106 (D106G)|
|Ref Sequence||ENSEMBL: ENSMUSP00000034090 (fasta)|
|Gene Model||predicted gene model for transcript(s): [ENSMUST00000034090]|
|AlphaFold||no structure available at present|
AA Change: D106G
PolyPhen 2 Score 0.896 (Sensitivity: 0.82; Specificity: 0.94)
AA Change: D106G
|Meta Mutation Damage Score||0.0771|
|Coding Region Coverage||
|Validation Efficiency||100% (83/83)|
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a zinc finger transcriptional repressor and may be part of the NuRD histone deacetylase complex (HDAC). Defects in this gene are a cause of Townes-Brocks syndrome (TBS) as well as bronchio-oto-renal syndrome (BOR). Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygotes for a targeted null mutation exhibit kidney agenesis or dysgenesis and die perinatally. Homozygotes expressing only a truncated protein show renal agenesis, exencephaly, and limb defects; heterozygotes have hearing loss and cystic kidneys. [provided by MGI curators]
|Allele List at MGI|
|Other mutations in this stock||
|Other mutations in Sall1||
(F):5'- AAGTTGCCCAGTGTCGTCAG -3'
(R):5'- GCTGCGCTGAATTCTTTGAATTATC -3'
(F):5'- TCCCCCAGTTGAGGTAGAGAG -3'
(R):5'- TCAGACCTTCTGCTCCATAAAAAGAG -3'