Mutagenetix > Incidental Mutation

Incidental Mutation 'R2216:Ube2u'

241138

Institutional Source

Beutler Lab

Gene Symbol

Ube2u

Ensembl Gene

ENSMUSG00000069733

Gene Name

ubiquitin-conjugating enzyme E2U (putative)

Synonyms

MMRRC Submission

040218-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R2216 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

100478849-100550147 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 100532168 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 109 (V109A)

Ref Sequence

ENSEMBL: ENSMUSP00000090406 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000092730] [ENSMUST00000133493]

AlphaFold

B1AUC4

Predicted Effect

probably benign
Transcript: ENSMUST00000092730
AA Change: V109A

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)

SMART Domains

Protein: ENSMUSP00000090406
Gene: ENSMUSG00000069733
AA Change: V109A

Domain	Start	End	E-Value	Type
Blast:UBCc	1	40	4e-17	BLAST
coiled coil region	147	189	N/A	INTRINSIC
low complexity region	196	207	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000133493
AA Change: V222A

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000137472
Gene: ENSMUSG00000069733
AA Change: V222A

Domain	Start	End	E-Value	Type
UBCc	7	153	1.58e-25	SMART
coiled coil region	260	302	N/A	INTRINSIC
low complexity region	309	320	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000142634

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 97.0%
20x: 94.2%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 54 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aipl1	G	T	11: 72,031,446 (GRCm38)	P146T	probably damaging	Het
Arnt2	T	A	7: 84,275,351 (GRCm38)	T423S	probably damaging	Het
Bend5	A	G	4: 111,448,590 (GRCm38)	N277S	probably null	Het
Cd22	G	T	7: 30,867,046 (GRCm38)	T816N	probably damaging	Het
Cep126	G	A	9: 8,120,678 (GRCm38)	R115C	probably damaging	Het
Cep85	T	C	4: 134,131,430 (GRCm38)	H710R	possibly damaging	Het
Cmya5	A	T	13: 93,093,495 (GRCm38)	L1695H	probably damaging	Het
Col24a1	T	C	3: 145,314,981 (GRCm38)	V371A	probably benign	Het
Csmd1	T	A	8: 17,027,339 (GRCm38)		probably null	Het
Cyp1a1	T	A	9: 57,702,069 (GRCm38)		probably null	Het
Dennd1c	C	T	17: 57,074,492 (GRCm38)		probably null	Het
Dmxl1	G	A	18: 49,893,923 (GRCm38)	V2033I	probably benign	Het
Dtna	A	G	18: 23,569,565 (GRCm38)	H51R	probably damaging	Het
Dysf	G	A	6: 84,207,245 (GRCm38)		probably null	Het
Gcn1l1	T	A	5: 115,593,661 (GRCm38)	V945E	probably benign	Het
Gm12800	T	A	4: 101,910,060 (GRCm38)	W169R	probably damaging	Het
Gpbar1	C	G	1: 74,278,894 (GRCm38)	L99V	probably damaging	Het
Hdac9	A	T	12: 34,429,517 (GRCm38)	D212E	probably damaging	Het
Itga1	A	T	13: 114,997,029 (GRCm38)	D448E	probably benign	Het
Itga2b	T	A	11: 102,467,866 (GRCm38)	N75I	probably benign	Het
Klra7	T	C	6: 130,228,586 (GRCm38)	E117G	probably benign	Het
Kmt2b	G	A	7: 30,574,065 (GRCm38)	R2349C	probably benign	Het
Masp1	T	C	16: 23,492,055 (GRCm38)	N209S	probably benign	Het
Mybpc2	C	T	7: 44,512,500 (GRCm38)		probably null	Het
Myh15	C	G	16: 49,165,838 (GRCm38)	S1557*	probably null	Het
Myo3a	A	C	2: 22,577,771 (GRCm38)	T346P	probably benign	Het
Nim1k	A	G	13: 119,714,215 (GRCm38)	Y152H	probably damaging	Het
Nrp2	C	T	1: 62,762,918 (GRCm38)	R507*	probably null	Het
Olfr513	C	T	7: 108,755,612 (GRCm38)	T252M	probably damaging	Het
Olfr702	T	A	7: 106,823,998 (GRCm38)	H176L	probably damaging	Het
Parp14	T	C	16: 35,857,205 (GRCm38)	I798V	probably benign	Het
Pcnx2	C	T	8: 125,888,077 (GRCm38)	A212T	probably benign	Het
Pkhd1l1	A	T	15: 44,573,895 (GRCm38)	H3522L	probably damaging	Het
Pram1	C	T	17: 33,641,284 (GRCm38)	A275V	probably benign	Het
Prkag1	A	T	15: 98,815,946 (GRCm38)	M1K	probably null	Het
Prss52	T	C	14: 64,113,593 (GRCm38)	S276P	probably damaging	Het
Ranbp17	A	T	11: 33,481,125 (GRCm38)	V284D	probably damaging	Het
Reln	T	C	5: 22,048,005 (GRCm38)	D648G	probably benign	Het
Rnf112	A	G	11: 61,452,279 (GRCm38)	L190P	probably damaging	Het
Scn5a	T	C	9: 119,513,085 (GRCm38)	Y1138C	probably benign	Het
Scn5a	G	T	9: 119,485,612 (GRCm38)	P2010Q	probably benign	Het
Slc4a9	A	G	18: 36,530,745 (GRCm38)	H274R	probably benign	Het
Slc5a6	T	G	5: 31,039,335 (GRCm38)	E391D	possibly damaging	Het
Speer2	T	C	16: 69,858,842 (GRCm38)	Q32R	possibly damaging	Het
Tars	A	G	15: 11,389,708 (GRCm38)	V372A	probably benign	Het
Thsd7a	A	T	6: 12,337,268 (GRCm38)	L1250Q	possibly damaging	Het
Tnnt3	A	G	7: 142,512,564 (GRCm38)	Y222C	probably benign	Het
Trim40	T	C	17: 36,888,983 (GRCm38)	I68V	probably benign	Het
Trp53tg5	T	C	2: 164,471,306 (GRCm38)	I150V	probably benign	Het
Usp54	A	T	14: 20,561,840 (GRCm38)	D969E	probably benign	Het
Vil1	G	T	1: 74,425,679 (GRCm38)	R495L	probably benign	Het
Wfs1	T	A	5: 36,967,220 (GRCm38)	K700*	probably null	Het
Zcchc8	A	G	5: 123,707,403 (GRCm38)	L298P	probably damaging	Het
Zfp946	A	T	17: 22,454,716 (GRCm38)	Q150H	possibly damaging	Het

Other mutations in Ube2u

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01324:Ube2u	APN	4	100,479,225 (GRCm38)	missense	possibly damaging	0.77
IGL01641:Ube2u	APN	4	100,481,657 (GRCm38)	missense	probably benign	0.02
IGL02633:Ube2u	APN	4	100,482,774 (GRCm38)	splice site	probably benign
IGL03126:Ube2u	APN	4	100,550,002 (GRCm38)	makesense	probably null
IGL03358:Ube2u	APN	4	100,547,275 (GRCm38)	splice site	probably benign
R0043:Ube2u	UTSW	4	100,482,829 (GRCm38)	missense	possibly damaging	0.93
R0102:Ube2u	UTSW	4	100,549,925 (GRCm38)	missense	possibly damaging	0.66
R0102:Ube2u	UTSW	4	100,549,925 (GRCm38)	missense	possibly damaging	0.66
R0110:Ube2u	UTSW	4	100,486,673 (GRCm38)	missense	probably benign	0.01
R0113:Ube2u	UTSW	4	100,481,655 (GRCm38)	missense	possibly damaging	0.93
R0357:Ube2u	UTSW	4	100,481,654 (GRCm38)	nonsense	probably null
R0395:Ube2u	UTSW	4	100,481,648 (GRCm38)	missense	probably benign	0.02
R0465:Ube2u	UTSW	4	100,532,096 (GRCm38)	splice site	probably benign
R0469:Ube2u	UTSW	4	100,486,673 (GRCm38)	missense	probably benign	0.01
R0788:Ube2u	UTSW	4	100,514,740 (GRCm38)	splice site	probably benign
R1958:Ube2u	UTSW	4	100,481,636 (GRCm38)	missense	probably benign
R2937:Ube2u	UTSW	4	100,524,298 (GRCm38)	missense	possibly damaging	0.93
R4086:Ube2u	UTSW	4	100,549,842 (GRCm38)	missense	probably benign	0.18
R4471:Ube2u	UTSW	4	100,481,646 (GRCm38)	nonsense	probably null
R4781:Ube2u	UTSW	4	100,486,658 (GRCm38)	missense	probably benign	0.08
R6385:Ube2u	UTSW	4	100,532,144 (GRCm38)	missense	possibly damaging	0.91
R6912:Ube2u	UTSW	4	100,532,155 (GRCm38)	missense	probably damaging	0.99
R7382:Ube2u	UTSW	4	100,532,182 (GRCm38)	nonsense	probably null
R8793:Ube2u	UTSW	4	100,479,219 (GRCm38)	missense	probably damaging	0.99
R9349:Ube2u	UTSW	4	100,549,997 (GRCm38)	missense	unknown
R9469:Ube2u	UTSW	4	100,549,761 (GRCm38)	missense	possibly damaging	0.72
R9644:Ube2u	UTSW	4	100,549,746 (GRCm38)	small deletion	probably benign
Z1176:Ube2u	UTSW	4	100,482,840 (GRCm38)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- GTGTGCAATTGCCACGTATC -3'
(R):5'- AGCTTTCGTACCTGAGTTCTTG -3'

Sequencing Primer
(F):5'- GCCACGTATCAACTTAATGAGAAGTG -3'
(R):5'- CGTACCTGAGTTCTTGTGTGTG -3'

Posted On

2014-10-15