Incidental Mutation 'R4700:Ttc3'
ID |
355978 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Ttc3
|
Ensembl Gene |
ENSMUSG00000040785 |
Gene Name |
tetratricopeptide repeat domain 3 |
Synonyms |
D16Ium21e, TPRD, 2610202A04Rik, D16Ium21 |
MMRRC Submission |
041948-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.574)
|
Stock # |
R4700 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
16 |
Chromosomal Location |
94171479-94270081 bp(+) (GRCm39) |
Type of Mutation |
splice site (4896 bp from exon) |
DNA Base Change (assembly) |
A to G
at 94240100 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000122726
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000117648]
[ENSMUST00000122895]
[ENSMUST00000143145]
[ENSMUST00000147352]
[ENSMUST00000150346]
[ENSMUST00000151770]
[ENSMUST00000152117]
[ENSMUST00000155692]
[ENSMUST00000231569]
[ENSMUST00000232660]
[ENSMUST00000232395]
[ENSMUST00000231915]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000117648
AA Change: D1075G
PolyPhen 2
Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000112801 Gene: ENSMUSG00000040785 AA Change: D1075G
Domain | Start | End | E-Value | Type |
TPR
|
231 |
264 |
3.61e-2 |
SMART |
TPR
|
265 |
298 |
3.32e-1 |
SMART |
Blast:TPR
|
300 |
332 |
2e-12 |
BLAST |
low complexity region
|
444 |
459 |
N/A |
INTRINSIC |
TPR
|
576 |
609 |
2.55e-2 |
SMART |
low complexity region
|
720 |
732 |
N/A |
INTRINSIC |
coiled coil region
|
765 |
796 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1050 |
N/A |
INTRINSIC |
low complexity region
|
1170 |
1190 |
N/A |
INTRINSIC |
low complexity region
|
1248 |
1260 |
N/A |
INTRINSIC |
low complexity region
|
1278 |
1291 |
N/A |
INTRINSIC |
coiled coil region
|
1472 |
1570 |
N/A |
INTRINSIC |
low complexity region
|
1876 |
1887 |
N/A |
INTRINSIC |
RING
|
1931 |
1970 |
7e-9 |
SMART |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000122895
AA Change: D1057G
PolyPhen 2
Score 0.931 (Sensitivity: 0.81; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000123037 Gene: ENSMUSG00000040785 AA Change: D1057G
Domain | Start | End | E-Value | Type |
TPR
|
213 |
246 |
3.61e-2 |
SMART |
TPR
|
247 |
280 |
3.32e-1 |
SMART |
Blast:TPR
|
282 |
314 |
3e-12 |
BLAST |
low complexity region
|
426 |
441 |
N/A |
INTRINSIC |
TPR
|
558 |
591 |
2.55e-2 |
SMART |
low complexity region
|
702 |
714 |
N/A |
INTRINSIC |
coiled coil region
|
747 |
778 |
N/A |
INTRINSIC |
low complexity region
|
1000 |
1014 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000139607
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000143145
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000147352
AA Change: D1056G
PolyPhen 2
Score 0.931 (Sensitivity: 0.81; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000116097 Gene: ENSMUSG00000040785 AA Change: D1056G
Domain | Start | End | E-Value | Type |
TPR
|
213 |
246 |
3.61e-2 |
SMART |
TPR
|
247 |
280 |
3.32e-1 |
SMART |
Blast:TPR
|
282 |
314 |
3e-12 |
BLAST |
low complexity region
|
426 |
441 |
N/A |
INTRINSIC |
TPR
|
558 |
591 |
2.55e-2 |
SMART |
low complexity region
|
702 |
714 |
N/A |
INTRINSIC |
coiled coil region
|
747 |
778 |
N/A |
INTRINSIC |
low complexity region
|
1000 |
1014 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000150346
|
SMART Domains |
Protein: ENSMUSP00000122726 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
43 |
58 |
N/A |
INTRINSIC |
Pfam:TPR_1
|
175 |
206 |
9.6e-6 |
PFAM |
low complexity region
|
319 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
364 |
395 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000151770
AA Change: D1074G
PolyPhen 2
Score 0.931 (Sensitivity: 0.81; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000121349 Gene: ENSMUSG00000040785 AA Change: D1074G
Domain | Start | End | E-Value | Type |
TPR
|
231 |
264 |
3.61e-2 |
SMART |
TPR
|
265 |
298 |
3.32e-1 |
SMART |
Blast:TPR
|
300 |
332 |
3e-12 |
BLAST |
low complexity region
|
444 |
459 |
N/A |
INTRINSIC |
TPR
|
576 |
609 |
2.55e-2 |
SMART |
low complexity region
|
720 |
732 |
N/A |
INTRINSIC |
coiled coil region
|
765 |
796 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1050 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000152117
AA Change: D674G
PolyPhen 2
Score 0.978 (Sensitivity: 0.76; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000116896 Gene: ENSMUSG00000040785 AA Change: D674G
Domain | Start | End | E-Value | Type |
low complexity region
|
43 |
58 |
N/A |
INTRINSIC |
SCOP:d1ihga1
|
69 |
201 |
6e-8 |
SMART |
Blast:TPR
|
175 |
208 |
1e-14 |
BLAST |
low complexity region
|
319 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
364 |
395 |
N/A |
INTRINSIC |
low complexity region
|
617 |
631 |
N/A |
INTRINSIC |
low complexity region
|
635 |
649 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000155692
AA Change: D1094G
PolyPhen 2
Score 0.931 (Sensitivity: 0.81; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000122724 Gene: ENSMUSG00000040785 AA Change: D1094G
Domain | Start | End | E-Value | Type |
TPR
|
250 |
283 |
3.61e-2 |
SMART |
TPR
|
284 |
317 |
3.32e-1 |
SMART |
Blast:TPR
|
319 |
351 |
3e-12 |
BLAST |
low complexity region
|
463 |
478 |
N/A |
INTRINSIC |
TPR
|
595 |
628 |
2.55e-2 |
SMART |
low complexity region
|
739 |
751 |
N/A |
INTRINSIC |
coiled coil region
|
784 |
815 |
N/A |
INTRINSIC |
low complexity region
|
1037 |
1051 |
N/A |
INTRINSIC |
low complexity region
|
1055 |
1069 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000231569
AA Change: D720G
PolyPhen 2
Score 0.955 (Sensitivity: 0.79; Specificity: 0.95)
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000232660
AA Change: D1075G
PolyPhen 2
Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000232395
AA Change: D1075G
PolyPhen 2
Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000232368
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000231915
|
Meta Mutation Damage Score |
0.7022 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.8%
- 20x: 94.0%
|
Validation Efficiency |
97% (127/131) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 112 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
A530084C06Rik |
A |
G |
13: 31,742,795 (GRCm39) |
|
probably benign |
Het |
Abca13 |
A |
G |
11: 9,242,306 (GRCm39) |
T1390A |
possibly damaging |
Het |
Abca14 |
T |
A |
7: 119,911,928 (GRCm39) |
|
probably null |
Het |
Abca8a |
A |
C |
11: 109,961,308 (GRCm39) |
V538G |
probably damaging |
Het |
Acy1 |
C |
T |
9: 106,310,782 (GRCm39) |
G329R |
probably benign |
Het |
Adamts17 |
T |
C |
7: 66,691,636 (GRCm39) |
C607R |
probably damaging |
Het |
Adamts20 |
A |
T |
15: 94,292,503 (GRCm39) |
C202* |
probably null |
Het |
Adcy5 |
A |
G |
16: 35,099,586 (GRCm39) |
N712S |
possibly damaging |
Het |
Ahnak |
A |
G |
19: 8,982,045 (GRCm39) |
K1110E |
probably benign |
Het |
Anks6 |
T |
A |
4: 47,033,127 (GRCm39) |
H578L |
possibly damaging |
Het |
Appl1 |
C |
A |
14: 26,647,928 (GRCm39) |
L626F |
probably benign |
Het |
Arl1 |
A |
G |
10: 88,566,499 (GRCm39) |
|
probably benign |
Het |
Atf4 |
T |
A |
15: 80,141,618 (GRCm39) |
I336K |
probably damaging |
Het |
Atp7b |
A |
T |
8: 22,490,137 (GRCm39) |
S1044T |
probably benign |
Het |
Carm1 |
A |
G |
9: 21,498,480 (GRCm39) |
N466S |
probably benign |
Het |
Cbl |
A |
G |
9: 44,084,677 (GRCm39) |
S153P |
probably damaging |
Het |
Ccdc159 |
A |
G |
9: 21,839,027 (GRCm39) |
|
probably null |
Het |
Cd109 |
CATTTATTTATTTATTTATTTATTTATTTATTTAT |
CATTTATTTATTTATTTATTTATTTATTTATTTATTTAT |
9: 78,619,782 (GRCm39) |
|
probably benign |
Het |
Cdc7 |
T |
C |
5: 107,121,707 (GRCm39) |
F207L |
probably benign |
Het |
Celsr2 |
T |
C |
3: 108,304,547 (GRCm39) |
R2271G |
probably benign |
Het |
Cep162 |
T |
C |
9: 87,088,915 (GRCm39) |
Q989R |
probably damaging |
Het |
Cep89 |
A |
G |
7: 35,137,862 (GRCm39) |
T749A |
probably benign |
Het |
Clcn5 |
T |
C |
X: 7,032,591 (GRCm39) |
|
probably null |
Het |
Clu |
A |
T |
14: 66,217,313 (GRCm39) |
Y382F |
probably benign |
Het |
Cnih4 |
A |
G |
1: 180,993,808 (GRCm39) |
|
probably benign |
Het |
Crb1 |
A |
G |
1: 139,126,509 (GRCm39) |
L1340P |
probably damaging |
Het |
Ddx4 |
T |
C |
13: 112,750,269 (GRCm39) |
T421A |
probably damaging |
Het |
Dennd5a |
T |
C |
7: 109,520,405 (GRCm39) |
E484G |
probably benign |
Het |
Dsg4 |
G |
T |
18: 20,589,965 (GRCm39) |
V372L |
possibly damaging |
Het |
Dyrk2 |
T |
C |
10: 118,704,191 (GRCm39) |
D21G |
probably benign |
Het |
E2f1 |
C |
G |
2: 154,405,942 (GRCm39) |
G144R |
probably damaging |
Het |
Epb41l4a |
A |
T |
18: 33,935,560 (GRCm39) |
|
probably null |
Het |
F10 |
G |
T |
8: 13,089,621 (GRCm39) |
V67F |
possibly damaging |
Het |
Fat3 |
A |
G |
9: 15,942,469 (GRCm39) |
I1301T |
probably damaging |
Het |
Filip1l |
A |
G |
16: 57,391,058 (GRCm39) |
T549A |
probably benign |
Het |
Flt4 |
C |
A |
11: 49,517,271 (GRCm39) |
|
probably benign |
Het |
Fndc1 |
G |
A |
17: 7,990,312 (GRCm39) |
T1128I |
unknown |
Het |
Fos |
T |
C |
12: 85,522,936 (GRCm39) |
S283P |
probably benign |
Het |
Fryl |
T |
C |
5: 73,222,881 (GRCm39) |
Y1900C |
possibly damaging |
Het |
Fsip2 |
C |
A |
2: 82,817,373 (GRCm39) |
Q4369K |
probably benign |
Het |
Gad2 |
A |
T |
2: 22,563,982 (GRCm39) |
H395L |
probably damaging |
Het |
Grm2 |
T |
A |
9: 106,531,130 (GRCm39) |
I120F |
probably benign |
Het |
Hjurp |
GT |
GTT |
1: 88,194,246 (GRCm39) |
|
probably null |
Het |
Igsf10 |
A |
T |
3: 59,227,751 (GRCm39) |
I1974N |
probably damaging |
Het |
Il23r |
T |
C |
6: 67,450,834 (GRCm39) |
N215S |
probably damaging |
Het |
Jph1 |
T |
A |
1: 17,161,928 (GRCm39) |
M245L |
possibly damaging |
Het |
Loxl4 |
G |
A |
19: 42,596,052 (GRCm39) |
H147Y |
probably benign |
Het |
Lsg1 |
A |
G |
16: 30,384,267 (GRCm39) |
I521T |
probably damaging |
Het |
Ltc4s |
C |
T |
11: 50,127,908 (GRCm39) |
G83R |
probably damaging |
Het |
Map2 |
A |
G |
1: 66,449,796 (GRCm39) |
E173G |
probably damaging |
Het |
Med29 |
T |
A |
7: 28,086,352 (GRCm39) |
D152V |
possibly damaging |
Het |
Megf8 |
A |
G |
7: 25,062,940 (GRCm39) |
D2432G |
probably damaging |
Het |
Mrpl38 |
G |
A |
11: 116,025,978 (GRCm39) |
|
probably benign |
Het |
Myh7 |
A |
G |
14: 55,225,778 (GRCm39) |
I521T |
possibly damaging |
Het |
Mylk |
G |
T |
16: 34,742,805 (GRCm39) |
V1106L |
probably benign |
Het |
Myo15b |
A |
T |
11: 115,752,761 (GRCm39) |
D753V |
possibly damaging |
Het |
Myo1g |
T |
C |
11: 6,466,785 (GRCm39) |
|
probably null |
Het |
Myrfl |
A |
G |
10: 116,613,247 (GRCm39) |
|
probably null |
Het |
Naip5 |
A |
G |
13: 100,359,922 (GRCm39) |
V438A |
possibly damaging |
Het |
Nav3 |
A |
G |
10: 109,600,796 (GRCm39) |
V1277A |
probably benign |
Het |
Nek10 |
T |
A |
14: 14,842,841 (GRCm38) |
V182E |
possibly damaging |
Het |
Ngly1 |
T |
C |
14: 16,281,809 (GRCm38) |
V355A |
probably benign |
Het |
Nol6 |
T |
C |
4: 41,118,944 (GRCm39) |
E683G |
possibly damaging |
Het |
Obsl1 |
A |
T |
1: 75,480,085 (GRCm39) |
V487E |
probably damaging |
Het |
Oc90 |
T |
A |
15: 65,753,354 (GRCm39) |
R322W |
possibly damaging |
Het |
Or1q1 |
C |
A |
2: 36,887,515 (GRCm39) |
A231D |
probably benign |
Het |
Or4f60 |
A |
G |
2: 111,902,097 (GRCm39) |
V277A |
possibly damaging |
Het |
Or52e4 |
A |
T |
7: 104,705,483 (GRCm39) |
H10L |
possibly damaging |
Het |
Or8b4 |
A |
G |
9: 37,830,217 (GRCm39) |
E93G |
possibly damaging |
Het |
Osbp2 |
T |
C |
11: 3,662,160 (GRCm39) |
H231R |
probably damaging |
Het |
Pate6 |
A |
T |
9: 35,701,021 (GRCm39) |
C22S |
probably damaging |
Het |
Pdzph1 |
T |
C |
17: 59,281,541 (GRCm39) |
H247R |
probably damaging |
Het |
Pidd1 |
T |
C |
7: 141,022,162 (GRCm39) |
N209S |
probably damaging |
Het |
Pknox1 |
C |
T |
17: 31,822,286 (GRCm39) |
A351V |
probably damaging |
Het |
Plxnd1 |
C |
A |
6: 115,935,576 (GRCm39) |
V1737F |
probably damaging |
Het |
Prkdc |
A |
T |
16: 15,519,976 (GRCm39) |
K1138M |
probably damaging |
Het |
Rad54l2 |
T |
C |
9: 106,631,224 (GRCm39) |
D21G |
possibly damaging |
Het |
Recql4 |
C |
T |
15: 76,592,785 (GRCm39) |
C302Y |
probably damaging |
Het |
Scgb2b6 |
T |
C |
7: 31,318,908 (GRCm39) |
|
noncoding transcript |
Het |
Sdc1 |
A |
G |
12: 8,840,541 (GRCm39) |
E106G |
possibly damaging |
Het |
Slc10a5 |
T |
G |
3: 10,400,360 (GRCm39) |
Q100P |
probably damaging |
Het |
Slc10a5 |
C |
A |
3: 10,400,359 (GRCm39) |
Q100H |
probably damaging |
Het |
Slc5a9 |
A |
T |
4: 111,748,134 (GRCm39) |
L226Q |
possibly damaging |
Het |
Slfn1 |
T |
C |
11: 83,012,475 (GRCm39) |
V197A |
probably benign |
Het |
Spire1 |
T |
C |
18: 67,645,935 (GRCm39) |
M244V |
probably benign |
Het |
St3gal3 |
C |
T |
4: 117,817,232 (GRCm39) |
V141I |
probably benign |
Het |
St6galnac4 |
G |
T |
2: 32,477,172 (GRCm39) |
|
probably benign |
Het |
Svep1 |
T |
C |
4: 58,097,323 (GRCm39) |
K1407E |
possibly damaging |
Het |
Tbc1d32 |
A |
G |
10: 56,100,745 (GRCm39) |
C78R |
probably damaging |
Het |
Tcstv5 |
T |
C |
13: 120,411,378 (GRCm39) |
Y76C |
probably benign |
Het |
Tln2 |
A |
G |
9: 67,253,809 (GRCm39) |
V754A |
probably benign |
Het |
Tmeff1 |
A |
T |
4: 48,636,869 (GRCm39) |
Y189F |
possibly damaging |
Het |
Tmem131l |
C |
T |
3: 83,806,519 (GRCm39) |
A1433T |
probably benign |
Het |
Tnfrsf8 |
T |
C |
4: 145,029,692 (GRCm39) |
Y36C |
probably damaging |
Het |
Trp53i11 |
G |
T |
2: 93,030,245 (GRCm39) |
R184L |
probably damaging |
Het |
Trpv1 |
A |
T |
11: 73,142,110 (GRCm39) |
M214L |
possibly damaging |
Het |
Tsnax |
T |
A |
8: 125,755,533 (GRCm39) |
S132T |
probably benign |
Het |
Ttc28 |
T |
C |
5: 111,424,909 (GRCm39) |
L1547P |
probably damaging |
Het |
Tubal3 |
T |
A |
13: 3,983,514 (GRCm39) |
D431E |
probably damaging |
Het |
Ugt2b36 |
A |
T |
5: 87,240,301 (GRCm39) |
|
probably null |
Het |
Vmn1r23 |
A |
T |
6: 57,903,190 (GRCm39) |
I196K |
probably benign |
Het |
Vmn1r55 |
A |
C |
7: 5,149,586 (GRCm39) |
L279R |
probably damaging |
Het |
Vmn1r55 |
G |
T |
7: 5,149,587 (GRCm39) |
L279M |
probably damaging |
Het |
Vmn2r89 |
G |
A |
14: 51,694,942 (GRCm39) |
G474E |
probably damaging |
Het |
Vps26b |
T |
C |
9: 26,926,511 (GRCm39) |
K163E |
probably damaging |
Het |
Zfp142 |
A |
G |
1: 74,609,431 (GRCm39) |
F1352L |
probably damaging |
Het |
Zfp422 |
C |
T |
6: 116,603,844 (GRCm39) |
E52K |
possibly damaging |
Het |
Zfp423 |
T |
A |
8: 88,508,338 (GRCm39) |
|
probably null |
Het |
Zfp493 |
T |
C |
13: 67,934,736 (GRCm39) |
F230L |
probably damaging |
Het |
Zfp760 |
T |
C |
17: 21,941,388 (GRCm39) |
C188R |
probably benign |
Het |
Zfyve28 |
G |
T |
5: 34,375,189 (GRCm39) |
T275K |
probably damaging |
Het |
Znhit3 |
T |
C |
11: 84,807,155 (GRCm39) |
N5D |
probably benign |
Het |
|
Other mutations in Ttc3 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00944:Ttc3
|
APN |
16 |
94,227,620 (GRCm39) |
splice site |
probably null |
|
IGL00979:Ttc3
|
APN |
16 |
94,257,577 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01520:Ttc3
|
APN |
16 |
94,191,066 (GRCm39) |
missense |
probably benign |
0.04 |
IGL01663:Ttc3
|
APN |
16 |
94,210,590 (GRCm39) |
critical splice donor site |
probably null |
|
IGL01720:Ttc3
|
APN |
16 |
94,186,228 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01736:Ttc3
|
APN |
16 |
94,243,386 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02045:Ttc3
|
APN |
16 |
94,210,540 (GRCm39) |
splice site |
probably benign |
|
IGL02203:Ttc3
|
APN |
16 |
94,219,457 (GRCm39) |
splice site |
probably benign |
|
IGL02327:Ttc3
|
APN |
16 |
94,248,967 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02794:Ttc3
|
APN |
16 |
94,268,785 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02898:Ttc3
|
APN |
16 |
94,220,285 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4378001:Ttc3
|
UTSW |
16 |
94,211,765 (GRCm39) |
missense |
probably benign |
0.01 |
R0064:Ttc3
|
UTSW |
16 |
94,223,106 (GRCm39) |
missense |
possibly damaging |
0.79 |
R0098:Ttc3
|
UTSW |
16 |
94,191,124 (GRCm39) |
missense |
probably benign |
0.02 |
R0112:Ttc3
|
UTSW |
16 |
94,186,181 (GRCm39) |
splice site |
probably benign |
|
R0135:Ttc3
|
UTSW |
16 |
94,263,127 (GRCm39) |
missense |
possibly damaging |
0.92 |
R0480:Ttc3
|
UTSW |
16 |
94,232,863 (GRCm39) |
nonsense |
probably null |
|
R0513:Ttc3
|
UTSW |
16 |
94,227,071 (GRCm39) |
missense |
probably damaging |
1.00 |
R0532:Ttc3
|
UTSW |
16 |
94,188,189 (GRCm39) |
splice site |
probably benign |
|
R0607:Ttc3
|
UTSW |
16 |
94,257,644 (GRCm39) |
nonsense |
probably null |
|
R0742:Ttc3
|
UTSW |
16 |
94,260,739 (GRCm39) |
missense |
probably benign |
0.23 |
R0905:Ttc3
|
UTSW |
16 |
94,257,648 (GRCm39) |
nonsense |
probably null |
|
R1118:Ttc3
|
UTSW |
16 |
94,217,127 (GRCm39) |
splice site |
probably benign |
|
R1355:Ttc3
|
UTSW |
16 |
94,219,496 (GRCm39) |
missense |
possibly damaging |
0.46 |
R1370:Ttc3
|
UTSW |
16 |
94,219,496 (GRCm39) |
missense |
possibly damaging |
0.46 |
R1486:Ttc3
|
UTSW |
16 |
94,248,988 (GRCm39) |
missense |
probably damaging |
1.00 |
R1598:Ttc3
|
UTSW |
16 |
94,223,156 (GRCm39) |
missense |
probably damaging |
1.00 |
R1641:Ttc3
|
UTSW |
16 |
94,244,176 (GRCm39) |
missense |
probably benign |
0.19 |
R2092:Ttc3
|
UTSW |
16 |
94,243,691 (GRCm39) |
missense |
probably benign |
0.02 |
R2232:Ttc3
|
UTSW |
16 |
94,260,831 (GRCm39) |
missense |
probably benign |
0.00 |
R2339:Ttc3
|
UTSW |
16 |
94,232,857 (GRCm39) |
missense |
probably damaging |
1.00 |
R2342:Ttc3
|
UTSW |
16 |
94,232,857 (GRCm39) |
missense |
probably damaging |
1.00 |
R2842:Ttc3
|
UTSW |
16 |
94,232,857 (GRCm39) |
missense |
probably damaging |
1.00 |
R3117:Ttc3
|
UTSW |
16 |
94,243,422 (GRCm39) |
missense |
possibly damaging |
0.51 |
R4194:Ttc3
|
UTSW |
16 |
94,223,136 (GRCm39) |
missense |
probably damaging |
0.99 |
R4329:Ttc3
|
UTSW |
16 |
94,267,820 (GRCm39) |
missense |
probably damaging |
1.00 |
R4431:Ttc3
|
UTSW |
16 |
94,211,817 (GRCm39) |
critical splice donor site |
probably null |
|
R4530:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4531:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4532:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4533:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4588:Ttc3
|
UTSW |
16 |
94,243,760 (GRCm39) |
missense |
probably benign |
0.01 |
R4625:Ttc3
|
UTSW |
16 |
94,189,131 (GRCm39) |
nonsense |
probably null |
|
R4676:Ttc3
|
UTSW |
16 |
94,243,620 (GRCm39) |
missense |
probably damaging |
1.00 |
R4856:Ttc3
|
UTSW |
16 |
94,191,142 (GRCm39) |
missense |
probably benign |
0.32 |
R4867:Ttc3
|
UTSW |
16 |
94,255,374 (GRCm39) |
missense |
probably damaging |
0.96 |
R4885:Ttc3
|
UTSW |
16 |
94,220,324 (GRCm39) |
missense |
probably damaging |
1.00 |
R4885:Ttc3
|
UTSW |
16 |
94,227,690 (GRCm39) |
critical splice donor site |
probably null |
|
R4899:Ttc3
|
UTSW |
16 |
94,230,314 (GRCm39) |
missense |
probably damaging |
1.00 |
R4997:Ttc3
|
UTSW |
16 |
94,253,841 (GRCm39) |
missense |
probably damaging |
1.00 |
R5023:Ttc3
|
UTSW |
16 |
94,230,218 (GRCm39) |
missense |
probably benign |
0.01 |
R5105:Ttc3
|
UTSW |
16 |
94,267,793 (GRCm39) |
missense |
possibly damaging |
0.94 |
R5205:Ttc3
|
UTSW |
16 |
94,248,918 (GRCm39) |
missense |
probably benign |
0.07 |
R5287:Ttc3
|
UTSW |
16 |
94,260,703 (GRCm39) |
missense |
probably benign |
0.00 |
R5338:Ttc3
|
UTSW |
16 |
94,184,900 (GRCm39) |
missense |
probably damaging |
0.99 |
R5347:Ttc3
|
UTSW |
16 |
94,230,479 (GRCm39) |
missense |
probably damaging |
1.00 |
R5403:Ttc3
|
UTSW |
16 |
94,260,703 (GRCm39) |
missense |
probably benign |
0.00 |
R5460:Ttc3
|
UTSW |
16 |
94,258,241 (GRCm39) |
missense |
probably benign |
0.32 |
R5739:Ttc3
|
UTSW |
16 |
94,240,183 (GRCm39) |
nonsense |
probably null |
|
R6242:Ttc3
|
UTSW |
16 |
94,243,554 (GRCm39) |
missense |
probably benign |
0.04 |
R6253:Ttc3
|
UTSW |
16 |
94,258,272 (GRCm39) |
critical splice donor site |
probably null |
|
R6455:Ttc3
|
UTSW |
16 |
94,219,482 (GRCm39) |
start codon destroyed |
probably null |
0.83 |
R6559:Ttc3
|
UTSW |
16 |
94,223,208 (GRCm39) |
critical splice donor site |
probably null |
|
R6564:Ttc3
|
UTSW |
16 |
94,243,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R6932:Ttc3
|
UTSW |
16 |
94,244,312 (GRCm39) |
missense |
probably benign |
|
R7331:Ttc3
|
UTSW |
16 |
94,195,218 (GRCm39) |
missense |
probably benign |
0.27 |
R7497:Ttc3
|
UTSW |
16 |
94,219,541 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7610:Ttc3
|
UTSW |
16 |
94,228,697 (GRCm39) |
missense |
probably benign |
0.11 |
R7738:Ttc3
|
UTSW |
16 |
94,188,241 (GRCm39) |
missense |
probably benign |
0.00 |
R7970:Ttc3
|
UTSW |
16 |
94,258,223 (GRCm39) |
missense |
probably damaging |
1.00 |
R8052:Ttc3
|
UTSW |
16 |
94,268,848 (GRCm39) |
missense |
probably benign |
0.09 |
R8087:Ttc3
|
UTSW |
16 |
94,243,812 (GRCm39) |
missense |
probably benign |
0.00 |
R8309:Ttc3
|
UTSW |
16 |
94,267,838 (GRCm39) |
missense |
probably damaging |
1.00 |
R8320:Ttc3
|
UTSW |
16 |
94,219,535 (GRCm39) |
missense |
probably damaging |
1.00 |
R8322:Ttc3
|
UTSW |
16 |
94,255,351 (GRCm39) |
missense |
probably damaging |
1.00 |
R8518:Ttc3
|
UTSW |
16 |
94,258,238 (GRCm39) |
missense |
probably benign |
0.21 |
R8670:Ttc3
|
UTSW |
16 |
94,191,067 (GRCm39) |
missense |
probably damaging |
0.99 |
R8826:Ttc3
|
UTSW |
16 |
94,232,829 (GRCm39) |
missense |
possibly damaging |
0.85 |
R8868:Ttc3
|
UTSW |
16 |
94,252,002 (GRCm39) |
missense |
probably benign |
0.00 |
R8873:Ttc3
|
UTSW |
16 |
94,243,842 (GRCm39) |
missense |
probably damaging |
0.97 |
R8940:Ttc3
|
UTSW |
16 |
94,230,358 (GRCm39) |
missense |
possibly damaging |
0.94 |
R8993:Ttc3
|
UTSW |
16 |
94,228,667 (GRCm39) |
missense |
possibly damaging |
0.85 |
R9068:Ttc3
|
UTSW |
16 |
94,204,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R9119:Ttc3
|
UTSW |
16 |
94,192,950 (GRCm39) |
missense |
probably damaging |
0.98 |
R9124:Ttc3
|
UTSW |
16 |
94,236,389 (GRCm39) |
missense |
probably benign |
0.00 |
R9129:Ttc3
|
UTSW |
16 |
94,185,208 (GRCm39) |
missense |
probably benign |
0.02 |
R9189:Ttc3
|
UTSW |
16 |
94,268,831 (GRCm39) |
missense |
possibly damaging |
0.62 |
R9217:Ttc3
|
UTSW |
16 |
94,230,467 (GRCm39) |
missense |
possibly damaging |
0.80 |
R9490:Ttc3
|
UTSW |
16 |
94,245,360 (GRCm39) |
missense |
probably benign |
|
R9564:Ttc3
|
UTSW |
16 |
94,248,918 (GRCm39) |
missense |
probably benign |
0.07 |
R9631:Ttc3
|
UTSW |
16 |
94,171,581 (GRCm39) |
intron |
probably benign |
|
X0022:Ttc3
|
UTSW |
16 |
94,243,384 (GRCm39) |
missense |
probably benign |
0.00 |
Y5378:Ttc3
|
UTSW |
16 |
94,212,988 (GRCm39) |
splice site |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- CAGTGTTTCTTGACTATAACCGTAG -3'
(R):5'- ACCTTTGATGTCTGCTTGGC -3'
Sequencing Primer
(F):5'- ATCCCCTGGACCTGGAGTTATG -3'
(R):5'- CAGGCAGGCTCACAAGTG -3'
|
Posted On |
2015-10-21 |