Mutagenetix > Incidental Mutation

Incidental Mutation 'R2211:Fam98a'

239416

Institutional Source

Beutler Lab

Gene Symbol

Fam98a

Ensembl Gene

ENSMUSG00000002017

Gene Name

family with sequence similarity 98, member A

Synonyms

2810405J04Rik

MMRRC Submission

040213-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.657) question?

Stock #

R2211 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

75537086-75551946 bp(-) (GRCm38)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

A to G at 75538945 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000108126 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000112507] [ENSMUST00000112507]

AlphaFold

Q3TJZ6

Predicted Effect

probably null
Transcript: ENSMUST00000112507

SMART Domains

Protein: ENSMUSP00000108126
Gene: ENSMUSG00000002017

Domain	Start	End	E-Value	Type
Pfam:DUF2465	11	328	1.1e-137	PFAM
low complexity region	334	396	N/A	INTRINSIC
low complexity region	401	441	N/A	INTRINSIC
low complexity region	448	481	N/A	INTRINSIC
low complexity region	485	501	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000112507

SMART Domains

Protein: ENSMUSP00000108126
Gene: ENSMUSG00000002017

Domain	Start	End	E-Value	Type
Pfam:DUF2465	11	328	1.1e-137	PFAM
low complexity region	334	396	N/A	INTRINSIC
low complexity region	401	441	N/A	INTRINSIC
low complexity region	448	481	N/A	INTRINSIC
low complexity region	485	501	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000140729

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 97.1%
20x: 94.5%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 71 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A430078G23Rik	T	C	8: 3,387,680	S268P	possibly damaging	Het
Adam18	A	G	8: 24,628,155	S34P	probably damaging	Het
Adam23	T	A	1: 63,573,129		probably benign	Het
Adcy10	A	T	1: 165,518,212	I277F	probably damaging	Het
Arfgef3	A	T	10: 18,592,245	S1736T	possibly damaging	Het
Arhgap21	A	T	2: 20,881,640	M242K	possibly damaging	Het
Astn1	A	G	1: 158,657,306	R4G	probably benign	Het
AU041133	G	A	10: 82,150,921	C135Y	probably damaging	Het
Cdc42bpb	A	G	12: 111,301,854	V53A	probably benign	Het
Cdh23	T	C	10: 60,466,004	D428G	possibly damaging	Het
Cebpa	T	C	7: 35,120,466	S350P	probably damaging	Het
Cftr	A	G	6: 18,214,280	M152V	probably null	Het
Cpa4	A	G	6: 30,583,650	N255S	possibly damaging	Het
Ddx51	T	A	5: 110,655,768	D343E	probably damaging	Het
Dnah7a	T	C	1: 53,479,773	I2942V	probably benign	Het
Dnajc1	G	T	2: 18,392,475	A9E	probably damaging	Het
Dpysl5	G	A	5: 30,791,597	D399N	probably damaging	Het
Edem3	A	G	1: 151,804,702	D526G	possibly damaging	Het
Emc10	G	A	7: 44,493,192	R109W	probably damaging	Het
Etaa1	G	A	11: 17,952,686	Q84*	probably null	Het
Fabp3	C	T	4: 130,312,387	T57I	probably benign	Het
Fam149a	G	A	8: 45,341,009	T674I	probably damaging	Het
Fat4	A	G	3: 38,891,527	N1523S	possibly damaging	Het
Fbxw10	A	G	11: 62,867,535	T529A	probably damaging	Het
Gzf1	C	T	2: 148,684,950	A447V	probably damaging	Het
Hap1	G	A	11: 100,354,724	T138M	probably benign	Het
Hic1	T	A	11: 75,169,384	R46W	possibly damaging	Het
Id4	T	A	13: 48,261,802	L102Q	probably damaging	Het
Il3ra	T	C	14: 14,355,029	C271R	probably benign	Het
Ints4	T	C	7: 97,509,750	I443T	possibly damaging	Het
Lmln	A	G	16: 33,109,778	E535G	probably benign	Het
Lrrtm4	A	G	6: 80,022,640	H345R	probably benign	Het
Ltbp3	T	C	19: 5,753,962	I834T	possibly damaging	Het
Mnd1	C	A	3: 84,134,109	C62F	probably benign	Het
Mpp5	A	T	12: 78,797,248	K75N	possibly damaging	Het
Ms4a18	C	A	19: 10,997,305	V341L	probably benign	Het
Nbr1	T	C	11: 101,567,264		probably null	Het
Nf1	T	C	11: 79,444,064	M914T	probably benign	Het
Notch3	T	A	17: 32,147,978	H861L	probably benign	Het
Nupl1	A	G	14: 60,232,640	F341L	probably damaging	Het
Ogfod2	C	A	5: 124,112,780		probably null	Het
Oit3	T	C	10: 59,428,070	D414G	probably damaging	Het
Olfr1079	T	C	2: 86,538,513	Y132C	probably damaging	Het
Olfr1497	T	A	19: 13,795,369	M81L	probably benign	Het
Olfr787	A	T	10: 129,462,940	K88M	probably damaging	Het
Olfr804	A	G	10: 129,705,451	H191R	probably benign	Het
Pcbp4	C	A	9: 106,460,734	H74Q	probably benign	Het
Pip5k1b	A	T	19: 24,378,850	D241E	probably damaging	Het
Plcb2	T	C	2: 118,723,534	D102G	probably benign	Het
Plekha5	G	A	6: 140,525,861	E4K	possibly damaging	Het
Ppargc1a	A	C	5: 51,474,259	S343A	possibly damaging	Het
Ppwd1	G	A	13: 104,207,142	S585L	probably benign	Het
Rarg	T	C	15: 102,239,524	N284S	probably benign	Het
Rnpepl1	C	T	1: 92,916,380	L278F	probably damaging	Het
Rp1	A	C	1: 4,348,139	S917A	probably damaging	Het
Rsf1	ATGGCG	ATGGCGAGGGTGGCG	7: 97,579,904		probably benign	Het
Rsph3b	T	C	17: 6,941,740	S189G	probably benign	Het
Sec31b	A	T	19: 44,523,150	L604Q	probably damaging	Het
Sema6b	T	A	17: 56,124,741	I641F	probably benign	Het
Slc35f5	A	T	1: 125,579,264	I309F	possibly damaging	Het
Smarca4	A	G	9: 21,686,029	E1360G	probably damaging	Het
Spata31d1c	T	C	13: 65,035,939	S432P	probably benign	Het
Spsb3	T	C	17: 24,890,937		probably null	Het
Sptbn4	T	C	7: 27,367,609	D1960G	probably damaging	Het
Srgap1	A	G	10: 121,853,740	V345A	possibly damaging	Het
Tiam2	C	A	17: 3,414,918	C307*	probably null	Het
Trim43b	T	A	9: 89,085,249	T444S	possibly damaging	Het
Trmt13	A	G	3: 116,594,754	I11T	probably benign	Het
Ylpm1	A	T	12: 85,044,378	R1073*	probably null	Het
Zfp524	T	C	7: 5,017,919	S149P	probably damaging	Het
Zfp777	T	C	6: 48,043,885	I312V	possibly damaging	Het

Other mutations in Fam98a

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00337:Fam98a	APN	17	75551747	missense	probably damaging	1.00
IGL00548:Fam98a	APN	17	75538818	missense	probably damaging	1.00
IGL02170:Fam98a	APN	17	75540192	critical splice acceptor site	probably null
IGL02399:Fam98a	APN	17	75538941	splice site	probably benign
IGL03062:Fam98a	APN	17	75540105	splice site	probably benign
IGL03246:Fam98a	APN	17	75538853	missense	probably damaging	0.99
R0584:Fam98a	UTSW	17	75544777	missense	probably damaging	1.00
R0594:Fam98a	UTSW	17	75538487	nonsense	probably null
R1121:Fam98a	UTSW	17	75538534	missense	unknown
R1366:Fam98a	UTSW	17	75539386	splice site	probably benign
R1387:Fam98a	UTSW	17	75538269	missense	unknown
R1424:Fam98a	UTSW	17	75540178	missense	probably damaging	1.00
R1533:Fam98a	UTSW	17	75541281	missense	probably damaging	1.00
R1651:Fam98a	UTSW	17	75547715	missense	probably benign	0.16
R4295:Fam98a	UTSW	17	75541347	missense	probably damaging	1.00
R4350:Fam98a	UTSW	17	75541225	missense	probably damaging	1.00
R4963:Fam98a	UTSW	17	75538982	missense	probably damaging	0.99
R5320:Fam98a	UTSW	17	75538815	missense	probably damaging	1.00
R5383:Fam98a	UTSW	17	75538581	missense	unknown
R6031:Fam98a	UTSW	17	75539432	missense	probably damaging	0.98
R6031:Fam98a	UTSW	17	75539432	missense	probably damaging	0.98
R7058:Fam98a	UTSW	17	75538389	missense	unknown
R7182:Fam98a	UTSW	17	75539018	nonsense	probably null
R7505:Fam98a	UTSW	17	75538238	missense	unknown
R7554:Fam98a	UTSW	17	75547675	nonsense	probably null
R7566:Fam98a	UTSW	17	75547662	missense	probably damaging	1.00
R8095:Fam98a	UTSW	17	75538771	missense	probably damaging	1.00
R8467:Fam98a	UTSW	17	75544835	missense	probably damaging	1.00
R8790:Fam98a	UTSW	17	75547689	missense	possibly damaging	0.93
R8827:Fam98a	UTSW	17	75544829	missense	possibly damaging	0.74
R9375:Fam98a	UTSW	17	75541335	missense	possibly damaging	0.55
R9625:Fam98a	UTSW	17	75538479	missense	unknown

Predicted Primers

PCR Primer
(F):5'- AGGAATGTTCATAACCACCTCTCC -3'
(R):5'- TGTTTCAACAGAGTCAGACAGAC -3'

Sequencing Primer
(F):5'- GCTGGGGGCCATCTTGTC -3'
(R):5'- GACAAACTAGCTAAGGTTTACCAG -3'

Posted On

2014-10-15