Incidental Mutation 'R9432:Rnf123'
ID 713032
Institutional Source Beutler Lab
Gene Symbol Rnf123
Ensembl Gene ENSMUSG00000041528
Gene Name ring finger protein 123
Synonyms KPC1
MMRRC Submission
Accession Numbers
Essential gene? Probably non essential (E-score: 0.171) question?
Stock # R9432 (G1)
Quality Score 225.009
Status Not validated
Chromosome 9
Chromosomal Location 107928869-107957183 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 107937008 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Histidine at position 849 (R849H)
Ref Sequence ENSEMBL: ENSMUSP00000125745 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000047746] [ENSMUST00000085060] [ENSMUST00000160249] [ENSMUST00000160649] [ENSMUST00000162355] [ENSMUST00000162753] [ENSMUST00000178267]
AlphaFold Q5XPI3
Predicted Effect probably damaging
Transcript: ENSMUST00000047746
AA Change: R849H

PolyPhen 2 Score 0.963 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000040803
Gene: ENSMUSG00000041528
AA Change: R849H

DomainStartEndE-ValueType
low complexity region 104 115 N/A INTRINSIC
SPRY 132 253 1.52e-28 SMART
low complexity region 471 488 N/A INTRINSIC
low complexity region 508 518 N/A INTRINSIC
coiled coil region 1047 1067 N/A INTRINSIC
low complexity region 1242 1251 N/A INTRINSIC
RING 1260 1297 5.27e-4 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000085060
SMART Domains Protein: ENSMUSP00000082137
Gene: ENSMUSG00000032593

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
LRRNT 33 65 2.55e-2 SMART
LRR 65 83 6.97e1 SMART
LRR_TYP 84 107 1.56e-2 SMART
LRR 109 131 2.84e1 SMART
LRR 132 155 7.05e-1 SMART
LRR 156 176 3.98e1 SMART
LRR 182 206 5.56e0 SMART
Blast:LRRCT 219 274 8e-23 BLAST
IG 285 372 1.59e-6 SMART
transmembrane domain 383 405 N/A INTRINSIC
low complexity region 407 422 N/A INTRINSIC
low complexity region 492 504 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000159306
SMART Domains Protein: ENSMUSP00000125695
Gene: ENSMUSG00000041528

DomainStartEndE-ValueType
coiled coil region 172 192 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000160249
AA Change: R843H

PolyPhen 2 Score 0.965 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000124548
Gene: ENSMUSG00000041528
AA Change: R843H

DomainStartEndE-ValueType
low complexity region 104 115 N/A INTRINSIC
SPRY 132 253 1.52e-28 SMART
low complexity region 471 488 N/A INTRINSIC
low complexity region 508 518 N/A INTRINSIC
coiled coil region 1041 1061 N/A INTRINSIC
low complexity region 1236 1245 N/A INTRINSIC
RING 1254 1291 5.27e-4 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000160649
AA Change: R843H

PolyPhen 2 Score 0.965 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000125495
Gene: ENSMUSG00000041528
AA Change: R843H

DomainStartEndE-ValueType
low complexity region 104 115 N/A INTRINSIC
SPRY 132 253 1.52e-28 SMART
low complexity region 471 488 N/A INTRINSIC
low complexity region 508 518 N/A INTRINSIC
coiled coil region 1041 1061 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000162355
AA Change: R849H

PolyPhen 2 Score 0.963 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000125745
Gene: ENSMUSG00000041528
AA Change: R849H

DomainStartEndE-ValueType
low complexity region 104 115 N/A INTRINSIC
SPRY 132 253 1.52e-28 SMART
low complexity region 471 488 N/A INTRINSIC
low complexity region 508 518 N/A INTRINSIC
coiled coil region 1047 1067 N/A INTRINSIC
low complexity region 1242 1251 N/A INTRINSIC
RING 1260 1297 5.27e-4 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000162753
Predicted Effect probably damaging
Transcript: ENSMUST00000178267
AA Change: R843H

PolyPhen 2 Score 0.965 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000136953
Gene: ENSMUSG00000041528
AA Change: R843H

DomainStartEndE-ValueType
low complexity region 104 115 N/A INTRINSIC
SPRY 132 253 1.52e-28 SMART
low complexity region 471 488 N/A INTRINSIC
low complexity region 508 518 N/A INTRINSIC
coiled coil region 1041 1061 N/A INTRINSIC
low complexity region 1236 1245 N/A INTRINSIC
RING 1254 1291 5.27e-4 SMART
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene contains a C-terminal RING finger domain, a motif present in a variety of functionally distinct proteins and known to be involved in protein-protein and protein-DNA interactions, and an N-terminal SPRY domain. This protein displays E3 ubiquitin ligase activity toward the cyclin-dependent kinase inhibitor 1B which is also known as p27 or KIP1. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2016]
Allele List at MGI
Other mutations in this stock
Total: 83 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930522L14Rik T C 5: 109,884,917 (GRCm39) R314G unknown Het
Abca13 G A 11: 9,244,559 (GRCm39) V2141M probably benign Het
Abcc10 G A 17: 46,634,710 (GRCm39) A431V possibly damaging Het
Acod1 A G 14: 103,292,414 (GRCm39) R313G probably damaging Het
Adam3 G T 8: 25,193,928 (GRCm39) S361R probably damaging Het
Ahcyl2 C T 6: 29,768,874 (GRCm39) T113M possibly damaging Het
Ano8 C A 8: 71,933,561 (GRCm39) R577L unknown Het
Arhgef7 T A 8: 11,869,646 (GRCm39) S653R probably damaging Het
Atp10a G A 7: 58,469,418 (GRCm39) V1090I possibly damaging Het
Birc6 A G 17: 74,966,216 (GRCm39) M4048V probably benign Het
C3 G A 17: 57,530,950 (GRCm39) P384S probably damaging Het
Camkk1 A T 11: 72,928,757 (GRCm39) E432V probably damaging Het
Celsr3 T A 9: 108,726,032 (GRCm39) V3087D probably benign Het
Ckap4 A G 10: 84,363,543 (GRCm39) S507P probably damaging Het
Coq6 G A 12: 84,420,464 (GRCm39) M471I probably benign Het
Csmd2 C A 4: 128,171,004 (GRCm39) H332Q Het
Cxcr1 T A 1: 74,231,231 (GRCm39) N264Y probably damaging Het
Dchs2 C A 3: 83,036,032 (GRCm39) R260S possibly damaging Het
Elmod2 C A 8: 84,057,761 (GRCm39) A41S possibly damaging Het
Emilin2 G A 17: 71,581,781 (GRCm39) T315I probably benign Het
Eml1 A G 12: 108,482,842 (GRCm39) N487S probably benign Het
Epn1 G T 7: 5,096,369 (GRCm39) R221L probably benign Het
Faah A G 4: 115,874,772 (GRCm39) V28A probably benign Het
Fbl G A 7: 27,876,689 (GRCm39) R230H probably benign Het
Fsip2 C T 2: 82,805,907 (GRCm39) S742F probably damaging Het
Gm5460 A G 14: 33,767,769 (GRCm39) D184G possibly damaging Het
Gpatch2l T C 12: 86,307,408 (GRCm39) V262A probably damaging Het
Grin2c A T 11: 115,142,052 (GRCm39) L789* probably null Het
H1f0 C T 15: 78,912,947 (GRCm39) P9L probably damaging Het
Hectd4 A G 5: 121,460,864 (GRCm39) T948A probably benign Het
Herc2 G A 7: 55,780,932 (GRCm39) G1199D probably damaging Het
Hoxb7 G T 11: 96,177,617 (GRCm39) A22S possibly damaging Het
Ifih1 T A 2: 62,439,618 (GRCm39) I519F probably damaging Het
Ifit1bl1 T A 19: 34,571,498 (GRCm39) I320F possibly damaging Het
Iqgap2 T C 13: 95,774,261 (GRCm39) T1320A probably benign Het
Kat2a A G 11: 100,602,178 (GRCm39) V192A probably damaging Het
Kat6b A C 14: 21,672,077 (GRCm39) H329P probably damaging Het
Klhl29 A G 12: 5,260,056 (GRCm39) L54P probably benign Het
Kntc1 A T 5: 123,925,112 (GRCm39) I1142F possibly damaging Het
Lipo3 A G 19: 33,533,864 (GRCm39) Y323H probably damaging Het
Lmtk3 G A 7: 45,441,994 (GRCm39) V351I probably damaging Het
Lrrc8b T C 5: 105,633,888 (GRCm39) S787P probably benign Het
Magi1 A G 6: 93,660,058 (GRCm39) I1179T probably damaging Het
Mapk11 T C 15: 89,028,631 (GRCm39) D269G probably benign Het
Mfsd13a T G 19: 46,354,868 (GRCm39) I15R probably benign Het
Myo1h G A 5: 114,499,366 (GRCm39) V143I possibly damaging Het
Naaladl1 T C 19: 6,156,917 (GRCm39) I187T possibly damaging Het
Nos1 G A 5: 118,034,871 (GRCm39) V416M probably damaging Het
Or14a256 G A 7: 86,265,065 (GRCm39) R263C possibly damaging Het
Or14j8 A G 17: 38,263,559 (GRCm39) S119P probably damaging Het
Or8k30 T G 2: 86,338,914 (GRCm39) I37S probably benign Het
Pcdh15 A G 10: 74,460,170 (GRCm39) T1373A probably damaging Het
Pcdh18 T G 3: 49,699,667 (GRCm39) M932L probably damaging Het
Pcdhb15 T A 18: 37,608,683 (GRCm39) H638Q probably benign Het
Pcdhb19 A G 18: 37,630,628 (GRCm39) E141G possibly damaging Het
Pds5b T G 5: 150,693,256 (GRCm39) L656R probably damaging Het
Plcl1 T C 1: 55,445,587 (GRCm39) L14P probably benign Het
Pzp A T 6: 128,499,128 (GRCm39) I173N Het
Sfrp5 T C 19: 42,188,225 (GRCm39) D198G probably damaging Het
Sftpb G C 6: 72,283,843 (GRCm39) A147P probably benign Het
Shank1 G A 7: 43,962,342 (GRCm39) S71N unknown Het
Slc30a6 A G 17: 74,719,699 (GRCm39) T220A possibly damaging Het
Slc5a3 T A 16: 91,874,615 (GRCm39) V224D probably benign Het
Smad5 T A 13: 56,875,417 (GRCm39) Y202N probably benign Het
Smok2b A G 17: 13,453,881 (GRCm39) I14V probably damaging Het
Tas2r108 T A 6: 40,471,121 (GRCm39) I199K probably damaging Het
Tcea2 A G 2: 181,322,227 (GRCm39) I10V probably damaging Het
Tfg G A 16: 56,524,868 (GRCm39) R113* probably null Het
Tubb4a A T 17: 57,388,034 (GRCm39) L331I probably benign Het
Ugt2b37 A G 5: 87,402,046 (GRCm39) V195A probably damaging Het
Umad1 A G 6: 8,401,096 (GRCm39) H55R unknown Het
Vmn1r176 A T 7: 23,534,743 (GRCm39) Y137N probably damaging Het
Vmn1r44 T A 6: 89,870,473 (GRCm39) M73K possibly damaging Het
Vmn2r112 A G 17: 22,821,233 (GRCm39) T69A Het
Vmn2r59 A T 7: 41,696,254 (GRCm39) Y163N probably damaging Het
Vps13c T A 9: 67,830,137 (GRCm39) D1514E probably benign Het
Vsir A G 10: 60,193,732 (GRCm39) D65G possibly damaging Het
Ypel3 A T 7: 126,379,262 (GRCm39) M112L probably benign Het
Zfp26 T A 9: 20,347,830 (GRCm39) K911N probably damaging Het
Zfp362 C T 4: 128,670,980 (GRCm39) R346Q probably damaging Het
Zfp595 A T 13: 67,465,407 (GRCm39) Y288* probably null Het
Zfyve28 G T 5: 34,400,633 (GRCm39) Q22K possibly damaging Het
Zswim4 T G 8: 84,963,539 (GRCm39) D32A probably damaging Het
Other mutations in Rnf123
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00950:Rnf123 APN 9 107,944,594 (GRCm39) critical splice donor site probably null
IGL01358:Rnf123 APN 9 107,946,381 (GRCm39) missense probably damaging 1.00
IGL01464:Rnf123 APN 9 107,929,501 (GRCm39) missense probably damaging 1.00
IGL01637:Rnf123 APN 9 107,935,437 (GRCm39) missense probably damaging 1.00
IGL01669:Rnf123 APN 9 107,935,555 (GRCm39) missense probably damaging 0.98
IGL01905:Rnf123 APN 9 107,948,569 (GRCm39) splice site probably benign
IGL02070:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02072:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02073:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02074:Rnf123 APN 9 107,944,088 (GRCm39) missense probably damaging 1.00
IGL02079:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02080:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02231:Rnf123 APN 9 107,943,598 (GRCm39) missense probably benign 0.17
IGL02281:Rnf123 APN 9 107,948,651 (GRCm39) missense probably benign 0.01
IGL02336:Rnf123 APN 9 107,939,041 (GRCm39) missense probably damaging 1.00
IGL02543:Rnf123 APN 9 107,943,547 (GRCm39) missense probably damaging 1.00
IGL02565:Rnf123 APN 9 107,929,411 (GRCm39) critical splice donor site probably null
IGL02571:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02572:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02574:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02586:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02589:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02600:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02601:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02602:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02603:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02609:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02628:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02629:Rnf123 APN 9 107,947,988 (GRCm39) splice site probably benign
IGL02629:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02630:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02631:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02632:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02650:Rnf123 APN 9 107,946,947 (GRCm39) missense probably benign 0.29
IGL02690:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02691:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02692:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02693:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02713:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02736:Rnf123 APN 9 107,945,501 (GRCm39) nonsense probably null
IGL02929:Rnf123 APN 9 107,946,275 (GRCm39) missense probably benign
R1175:Rnf123 UTSW 9 107,954,572 (GRCm39) missense probably benign
R1465:Rnf123 UTSW 9 107,948,665 (GRCm39) splice site probably benign
R1502:Rnf123 UTSW 9 107,945,709 (GRCm39) splice site probably null
R1682:Rnf123 UTSW 9 107,954,597 (GRCm39) missense probably benign 0.16
R1817:Rnf123 UTSW 9 107,940,125 (GRCm39) missense probably benign 0.41
R1855:Rnf123 UTSW 9 107,938,990 (GRCm39) missense probably damaging 1.00
R2394:Rnf123 UTSW 9 107,940,735 (GRCm39) missense probably benign 0.00
R2483:Rnf123 UTSW 9 107,940,720 (GRCm39) missense probably benign 0.16
R3896:Rnf123 UTSW 9 107,946,302 (GRCm39) splice site probably benign
R3940:Rnf123 UTSW 9 107,941,234 (GRCm39) splice site probably benign
R4206:Rnf123 UTSW 9 107,941,162 (GRCm39) missense probably benign 0.01
R4641:Rnf123 UTSW 9 107,935,786 (GRCm39) missense probably damaging 1.00
R4714:Rnf123 UTSW 9 107,929,638 (GRCm39) splice site probably null
R4767:Rnf123 UTSW 9 107,929,288 (GRCm39) missense probably damaging 1.00
R4849:Rnf123 UTSW 9 107,933,290 (GRCm39) missense probably damaging 1.00
R4899:Rnf123 UTSW 9 107,940,879 (GRCm39) missense probably damaging 1.00
R5274:Rnf123 UTSW 9 107,941,202 (GRCm39) frame shift probably null
R5275:Rnf123 UTSW 9 107,941,202 (GRCm39) frame shift probably null
R5276:Rnf123 UTSW 9 107,941,202 (GRCm39) frame shift probably null
R5294:Rnf123 UTSW 9 107,941,202 (GRCm39) frame shift probably null
R5295:Rnf123 UTSW 9 107,941,202 (GRCm39) frame shift probably null
R5394:Rnf123 UTSW 9 107,947,930 (GRCm39) missense probably damaging 1.00
R5717:Rnf123 UTSW 9 107,944,623 (GRCm39) missense probably damaging 1.00
R6186:Rnf123 UTSW 9 107,947,157 (GRCm39) missense possibly damaging 0.55
R6449:Rnf123 UTSW 9 107,933,252 (GRCm39) missense probably benign 0.17
R6502:Rnf123 UTSW 9 107,945,531 (GRCm39) missense possibly damaging 0.46
R6944:Rnf123 UTSW 9 107,940,822 (GRCm39) missense probably benign 0.02
R7003:Rnf123 UTSW 9 107,940,882 (GRCm39) critical splice acceptor site probably null
R7088:Rnf123 UTSW 9 107,935,735 (GRCm39) missense probably null 1.00
R7092:Rnf123 UTSW 9 107,945,799 (GRCm39) missense probably benign 0.07
R7100:Rnf123 UTSW 9 107,933,838 (GRCm39) missense probably damaging 1.00
R7257:Rnf123 UTSW 9 107,946,228 (GRCm39) missense probably damaging 1.00
R7453:Rnf123 UTSW 9 107,947,607 (GRCm39) splice site probably null
R7468:Rnf123 UTSW 9 107,946,208 (GRCm39) missense probably benign 0.00
R7517:Rnf123 UTSW 9 107,947,473 (GRCm39) nonsense probably null
R7577:Rnf123 UTSW 9 107,947,818 (GRCm39) missense probably damaging 1.00
R8296:Rnf123 UTSW 9 107,940,089 (GRCm39) missense probably damaging 1.00
R8322:Rnf123 UTSW 9 107,945,706 (GRCm39) missense probably benign 0.26
R8754:Rnf123 UTSW 9 107,948,363 (GRCm39) missense probably damaging 1.00
R8783:Rnf123 UTSW 9 107,946,272 (GRCm39) missense probably benign
R9052:Rnf123 UTSW 9 107,936,930 (GRCm39) missense probably damaging 1.00
R9156:Rnf123 UTSW 9 107,940,227 (GRCm39) splice site probably benign
R9170:Rnf123 UTSW 9 107,948,375 (GRCm39) missense probably damaging 1.00
R9332:Rnf123 UTSW 9 107,944,704 (GRCm39) missense probably benign 0.00
R9385:Rnf123 UTSW 9 107,929,467 (GRCm39) missense probably benign 0.02
R9394:Rnf123 UTSW 9 107,942,905 (GRCm39) missense probably damaging 1.00
R9717:Rnf123 UTSW 9 107,954,963 (GRCm39) missense probably benign 0.43
Z1176:Rnf123 UTSW 9 107,940,180 (GRCm39) missense probably damaging 1.00
Z1176:Rnf123 UTSW 9 107,935,594 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- AGATCGTGAATGGCCCCATC -3'
(R):5'- ACCTTTCGTAATGGGTTCTCG -3'

Sequencing Primer
(F):5'- TGAATGGCCCCATCACCTG -3'
(R):5'- GGGTTCTTGCCTGCCAAAAAC -3'
Posted On 2022-05-16