Incidental Mutation 'R8559:Vmn2r103'
ID |
660955 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r103
|
Ensembl Gene |
ENSMUSG00000091771 |
Gene Name |
vomeronasal 2, receptor 103 |
Synonyms |
EG627636 |
MMRRC Submission |
068522-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.058)
|
Stock # |
R8559 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
17 |
Chromosomal Location |
19993625-20032798 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 20032646 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Methionine to Valine
at position 807
(M807V)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000126756
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000172203]
|
AlphaFold |
E9PWW0 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000172203
AA Change: M807V
PolyPhen 2
Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)
|
SMART Domains |
Protein: ENSMUSP00000126756 Gene: ENSMUSG00000091771 AA Change: M807V
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
19 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
82 |
449 |
1.3e-37 |
PFAM |
Pfam:NCD3G
|
509 |
562 |
3.5e-22 |
PFAM |
Pfam:7tm_3
|
595 |
830 |
1.1e-51 |
PFAM |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.6%
- 20x: 98.8%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 63 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Actr6 |
T |
A |
10: 89,568,048 (GRCm39) |
H19L |
probably benign |
Het |
Adamts9 |
A |
T |
6: 92,784,117 (GRCm39) |
V1579E |
probably benign |
Het |
Arhgap40 |
C |
T |
2: 158,383,721 (GRCm39) |
R435C |
probably damaging |
Het |
Atp1a4 |
T |
C |
1: 172,078,897 (GRCm39) |
D207G |
probably damaging |
Het |
Btaf1 |
A |
G |
19: 36,964,273 (GRCm39) |
N948S |
probably benign |
Het |
Calcr |
G |
A |
6: 3,692,603 (GRCm39) |
P417L |
probably damaging |
Het |
Ccn2 |
CCCGCCAACCGC |
CCCGC |
10: 24,471,966 (GRCm39) |
|
probably null |
Het |
Cep250 |
T |
A |
2: 155,834,656 (GRCm39) |
S2194T |
probably damaging |
Het |
Clcn6 |
C |
T |
4: 148,111,032 (GRCm39) |
V102M |
possibly damaging |
Het |
Cog2 |
T |
C |
8: 125,269,647 (GRCm39) |
S396P |
probably benign |
Het |
Col28a1 |
C |
A |
6: 8,166,681 (GRCm39) |
R265L |
unknown |
Het |
Cpa6 |
C |
T |
1: 10,478,574 (GRCm39) |
W254* |
probably null |
Het |
Crtc2 |
T |
A |
3: 90,170,904 (GRCm39) |
M659K |
possibly damaging |
Het |
Dnah7c |
A |
G |
1: 46,764,299 (GRCm39) |
Y3020C |
probably damaging |
Het |
Dok2 |
C |
A |
14: 71,014,968 (GRCm39) |
H232N |
probably benign |
Het |
Edem3 |
A |
G |
1: 151,694,169 (GRCm39) |
E834G |
probably benign |
Het |
Elac2 |
T |
A |
11: 64,872,502 (GRCm39) |
|
probably null |
Het |
Epx |
T |
A |
11: 87,755,618 (GRCm39) |
I689F |
probably damaging |
Het |
Exd2 |
G |
A |
12: 80,522,631 (GRCm39) |
R30H |
probably benign |
Het |
Gja1 |
T |
C |
10: 56,264,304 (GRCm39) |
L221P |
probably damaging |
Het |
Gli3 |
T |
A |
13: 15,834,717 (GRCm39) |
L400Q |
probably damaging |
Het |
Gm8439 |
T |
A |
4: 120,458,008 (GRCm39) |
W50R |
unknown |
Het |
Greb1 |
T |
A |
12: 16,746,436 (GRCm39) |
D1278V |
probably damaging |
Het |
Grin3a |
C |
A |
4: 49,770,555 (GRCm39) |
C739F |
probably damaging |
Het |
Gucy2g |
C |
A |
19: 55,198,786 (GRCm39) |
V786F |
probably benign |
Het |
Hmcn1 |
G |
A |
1: 150,551,789 (GRCm39) |
T2605I |
probably benign |
Het |
Hmgxb3 |
T |
A |
18: 61,288,491 (GRCm39) |
T459S |
probably benign |
Het |
Ift172 |
T |
C |
5: 31,413,921 (GRCm39) |
H1469R |
probably damaging |
Het |
Il1rap |
A |
G |
16: 26,530,884 (GRCm39) |
I407V |
probably benign |
Het |
Inppl1 |
G |
T |
7: 101,478,834 (GRCm39) |
S555* |
probably null |
Het |
Krt8 |
T |
C |
15: 101,909,979 (GRCm39) |
M142V |
probably benign |
Het |
Lrrk1 |
T |
A |
7: 65,932,075 (GRCm39) |
N1049I |
possibly damaging |
Het |
Megf10 |
G |
A |
18: 57,373,699 (GRCm39) |
A166T |
probably damaging |
Het |
Mei4 |
A |
T |
9: 81,907,684 (GRCm39) |
H338L |
probably benign |
Het |
Mfsd2b |
T |
C |
12: 4,921,471 (GRCm39) |
T33A |
possibly damaging |
Het |
Mgat3 |
A |
T |
15: 80,096,370 (GRCm39) |
Y399F |
probably damaging |
Het |
Mtmr4 |
C |
T |
11: 87,494,950 (GRCm39) |
T414I |
probably damaging |
Het |
Muc4 |
T |
C |
16: 32,754,715 (GRCm38) |
S1530P |
unknown |
Het |
Myl4 |
T |
C |
11: 104,474,930 (GRCm39) |
V93A |
possibly damaging |
Het |
N4bp2 |
T |
A |
5: 65,982,628 (GRCm39) |
S1627R |
possibly damaging |
Het |
Narf |
T |
G |
11: 121,141,258 (GRCm39) |
|
probably null |
Het |
Nbas |
A |
C |
12: 13,402,809 (GRCm39) |
I788L |
probably benign |
Het |
Nlrc3 |
A |
G |
16: 3,783,146 (GRCm39) |
S104P |
probably benign |
Het |
Or14j6 |
A |
T |
17: 38,214,719 (GRCm39) |
Y94F |
probably benign |
Het |
Or4a68 |
T |
A |
2: 89,270,528 (GRCm39) |
I32F |
probably benign |
Het |
Or4c11 |
A |
T |
2: 88,695,527 (GRCm39) |
I193L |
probably benign |
Het |
Or8k3 |
A |
G |
2: 86,058,988 (GRCm39) |
V109A |
probably benign |
Het |
Ppp4r4 |
A |
T |
12: 103,559,420 (GRCm39) |
T534S |
probably benign |
Het |
Prg3 |
A |
G |
2: 84,819,680 (GRCm39) |
E58G |
probably benign |
Het |
Prima1 |
A |
G |
12: 103,163,512 (GRCm39) |
V153A |
possibly damaging |
Het |
Rp1 |
A |
T |
1: 4,419,784 (GRCm39) |
Y443N |
probably damaging |
Het |
Rpgrip1 |
T |
C |
14: 52,386,714 (GRCm39) |
S882P |
unknown |
Het |
Scn1a |
T |
A |
2: 66,118,077 (GRCm39) |
D412V |
probably damaging |
Het |
Srcin1 |
T |
C |
11: 97,427,975 (GRCm39) |
T180A |
probably damaging |
Het |
Suox |
A |
G |
10: 128,506,600 (GRCm39) |
L476P |
probably damaging |
Het |
Tas2r104 |
T |
C |
6: 131,662,388 (GRCm39) |
Y107C |
probably damaging |
Het |
Tubg2 |
T |
C |
11: 101,047,610 (GRCm39) |
V65A |
probably damaging |
Het |
Ubn1 |
T |
C |
16: 4,882,634 (GRCm39) |
V365A |
possibly damaging |
Het |
Vmn2r75 |
T |
A |
7: 85,815,480 (GRCm39) |
Y128F |
possibly damaging |
Het |
Vps13b |
A |
T |
15: 35,876,788 (GRCm39) |
I2814F |
probably damaging |
Het |
Vps54 |
T |
C |
11: 21,214,815 (GRCm39) |
Y108H |
probably damaging |
Het |
Wdr6 |
T |
A |
9: 108,452,593 (GRCm39) |
E430V |
probably benign |
Het |
Zfp619 |
T |
A |
7: 39,186,559 (GRCm39) |
V863E |
probably benign |
Het |
|
Other mutations in Vmn2r103 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00333:Vmn2r103
|
APN |
17 |
20,013,364 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL00939:Vmn2r103
|
APN |
17 |
20,015,227 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01120:Vmn2r103
|
APN |
17 |
20,013,259 (GRCm39) |
missense |
probably benign |
0.06 |
IGL01403:Vmn2r103
|
APN |
17 |
20,013,229 (GRCm39) |
missense |
probably benign |
|
IGL01404:Vmn2r103
|
APN |
17 |
20,032,696 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01713:Vmn2r103
|
APN |
17 |
20,014,330 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01802:Vmn2r103
|
APN |
17 |
20,019,470 (GRCm39) |
missense |
probably benign |
|
IGL02251:Vmn2r103
|
APN |
17 |
20,014,231 (GRCm39) |
missense |
possibly damaging |
0.84 |
IGL02466:Vmn2r103
|
APN |
17 |
19,993,631 (GRCm39) |
missense |
probably benign |
|
IGL02555:Vmn2r103
|
APN |
17 |
20,031,873 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02668:Vmn2r103
|
APN |
17 |
20,014,389 (GRCm39) |
missense |
probably benign |
0.03 |
IGL02715:Vmn2r103
|
APN |
17 |
20,014,218 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02735:Vmn2r103
|
APN |
17 |
20,032,510 (GRCm39) |
missense |
probably benign |
0.27 |
IGL03101:Vmn2r103
|
APN |
17 |
19,993,782 (GRCm39) |
missense |
probably damaging |
0.98 |
R0003:Vmn2r103
|
UTSW |
17 |
20,032,241 (GRCm39) |
missense |
probably damaging |
0.99 |
R0052:Vmn2r103
|
UTSW |
17 |
20,031,903 (GRCm39) |
missense |
probably benign |
0.01 |
R0375:Vmn2r103
|
UTSW |
17 |
20,013,726 (GRCm39) |
missense |
probably benign |
0.12 |
R0375:Vmn2r103
|
UTSW |
17 |
20,013,121 (GRCm39) |
missense |
probably benign |
0.06 |
R0755:Vmn2r103
|
UTSW |
17 |
19,993,830 (GRCm39) |
missense |
probably benign |
0.01 |
R0837:Vmn2r103
|
UTSW |
17 |
20,014,189 (GRCm39) |
missense |
probably damaging |
0.99 |
R1345:Vmn2r103
|
UTSW |
17 |
20,014,509 (GRCm39) |
missense |
probably damaging |
1.00 |
R1396:Vmn2r103
|
UTSW |
17 |
20,013,230 (GRCm39) |
missense |
probably benign |
|
R1488:Vmn2r103
|
UTSW |
17 |
20,013,922 (GRCm39) |
missense |
probably damaging |
0.97 |
R1533:Vmn2r103
|
UTSW |
17 |
19,993,662 (GRCm39) |
missense |
probably benign |
0.01 |
R1590:Vmn2r103
|
UTSW |
17 |
20,014,496 (GRCm39) |
missense |
probably benign |
|
R1928:Vmn2r103
|
UTSW |
17 |
20,032,029 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1942:Vmn2r103
|
UTSW |
17 |
20,032,562 (GRCm39) |
missense |
probably benign |
0.02 |
R2071:Vmn2r103
|
UTSW |
17 |
20,014,056 (GRCm39) |
missense |
probably benign |
|
R2219:Vmn2r103
|
UTSW |
17 |
20,013,909 (GRCm39) |
missense |
probably damaging |
1.00 |
R2442:Vmn2r103
|
UTSW |
17 |
19,993,793 (GRCm39) |
missense |
probably benign |
0.00 |
R2889:Vmn2r103
|
UTSW |
17 |
20,013,862 (GRCm39) |
missense |
probably damaging |
1.00 |
R3762:Vmn2r103
|
UTSW |
17 |
20,032,411 (GRCm39) |
missense |
probably damaging |
0.98 |
R4014:Vmn2r103
|
UTSW |
17 |
20,013,866 (GRCm39) |
missense |
possibly damaging |
0.67 |
R4331:Vmn2r103
|
UTSW |
17 |
20,014,495 (GRCm39) |
missense |
probably benign |
0.00 |
R4630:Vmn2r103
|
UTSW |
17 |
20,013,958 (GRCm39) |
missense |
probably benign |
0.04 |
R4631:Vmn2r103
|
UTSW |
17 |
20,013,958 (GRCm39) |
missense |
probably benign |
0.04 |
R4632:Vmn2r103
|
UTSW |
17 |
20,013,958 (GRCm39) |
missense |
probably benign |
0.04 |
R4660:Vmn2r103
|
UTSW |
17 |
20,032,077 (GRCm39) |
missense |
probably damaging |
1.00 |
R4801:Vmn2r103
|
UTSW |
17 |
20,015,338 (GRCm39) |
missense |
probably benign |
0.06 |
R4802:Vmn2r103
|
UTSW |
17 |
20,015,338 (GRCm39) |
missense |
probably benign |
0.06 |
R4931:Vmn2r103
|
UTSW |
17 |
20,032,031 (GRCm39) |
missense |
probably benign |
0.01 |
R4995:Vmn2r103
|
UTSW |
17 |
19,993,773 (GRCm39) |
missense |
probably benign |
0.14 |
R5309:Vmn2r103
|
UTSW |
17 |
20,013,296 (GRCm39) |
missense |
probably benign |
0.01 |
R5312:Vmn2r103
|
UTSW |
17 |
20,013,296 (GRCm39) |
missense |
probably benign |
0.01 |
R5329:Vmn2r103
|
UTSW |
17 |
20,032,433 (GRCm39) |
missense |
probably damaging |
1.00 |
R5611:Vmn2r103
|
UTSW |
17 |
20,013,904 (GRCm39) |
missense |
probably damaging |
0.99 |
R5684:Vmn2r103
|
UTSW |
17 |
20,013,251 (GRCm39) |
missense |
probably benign |
0.02 |
R5715:Vmn2r103
|
UTSW |
17 |
20,015,201 (GRCm39) |
missense |
probably benign |
0.17 |
R5907:Vmn2r103
|
UTSW |
17 |
20,032,715 (GRCm39) |
missense |
possibly damaging |
0.67 |
R6029:Vmn2r103
|
UTSW |
17 |
20,014,478 (GRCm39) |
nonsense |
probably null |
|
R6114:Vmn2r103
|
UTSW |
17 |
20,032,587 (GRCm39) |
missense |
probably damaging |
0.99 |
R6285:Vmn2r103
|
UTSW |
17 |
20,032,406 (GRCm39) |
missense |
probably benign |
|
R6292:Vmn2r103
|
UTSW |
17 |
20,013,866 (GRCm39) |
missense |
possibly damaging |
0.67 |
R6334:Vmn2r103
|
UTSW |
17 |
20,014,344 (GRCm39) |
missense |
probably damaging |
0.97 |
R6501:Vmn2r103
|
UTSW |
17 |
20,032,166 (GRCm39) |
missense |
probably benign |
0.29 |
R6710:Vmn2r103
|
UTSW |
17 |
20,032,239 (GRCm39) |
missense |
probably damaging |
1.00 |
R6774:Vmn2r103
|
UTSW |
17 |
19,993,773 (GRCm39) |
missense |
probably benign |
0.14 |
R6981:Vmn2r103
|
UTSW |
17 |
20,013,739 (GRCm39) |
missense |
probably benign |
0.00 |
R7768:Vmn2r103
|
UTSW |
17 |
20,032,314 (GRCm39) |
missense |
probably damaging |
0.99 |
R7816:Vmn2r103
|
UTSW |
17 |
20,014,476 (GRCm39) |
missense |
probably benign |
0.06 |
R7885:Vmn2r103
|
UTSW |
17 |
20,013,385 (GRCm39) |
missense |
probably benign |
0.25 |
R8002:Vmn2r103
|
UTSW |
17 |
20,019,511 (GRCm39) |
missense |
probably damaging |
1.00 |
R8031:Vmn2r103
|
UTSW |
17 |
20,013,759 (GRCm39) |
missense |
probably benign |
0.00 |
R8140:Vmn2r103
|
UTSW |
17 |
20,032,058 (GRCm39) |
missense |
probably damaging |
1.00 |
R8186:Vmn2r103
|
UTSW |
17 |
20,032,205 (GRCm39) |
missense |
probably damaging |
1.00 |
R9413:Vmn2r103
|
UTSW |
17 |
20,032,158 (GRCm39) |
missense |
possibly damaging |
0.54 |
R9591:Vmn2r103
|
UTSW |
17 |
20,031,921 (GRCm39) |
missense |
possibly damaging |
0.70 |
R9652:Vmn2r103
|
UTSW |
17 |
20,014,027 (GRCm39) |
missense |
probably benign |
0.01 |
R9680:Vmn2r103
|
UTSW |
17 |
20,019,525 (GRCm39) |
nonsense |
probably null |
|
R9743:Vmn2r103
|
UTSW |
17 |
20,032,475 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1088:Vmn2r103
|
UTSW |
17 |
20,015,309 (GRCm39) |
missense |
probably benign |
0.08 |
|
Predicted Primers |
PCR Primer
(F):5'- GGGATATCTCTGCTTCTTGGCC -3'
(R):5'- GAGCAGTTGAATCACCAGAGC -3'
Sequencing Primer
(F):5'- TGGCCCTTGGAAGTTACACCATG -3'
(R):5'- TTGAATCACCAGAGCAAACATGG -3'
|
Posted On |
2021-03-08 |